TomoSeq data search

Data search

Results for MligTC455_52815

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_52815	137	2.86	Mlig455_047847	Neo: - Age: Down-Up-Down	CLVS1	Mlig455_047847 {REF} {Length: 2198} {TRANSSPLICED} {Pfam: CRAL/TRIO domain [PF00650.22, score=68.5]; Divergent CRAL/TRIO domain [PF13716.8, score=25.3]} {Human: ENSG00000177182, CLVS1, clavesin 1, [Score=124, Expect=3e-32]} {Mouse: ENSMUSG00000039194, Rlbp1, retinaldehyde binding protein 1, [Score=129, Expect=2e-34]; ENSMUSG00000041216, Clvs1, clavesin 1, [Score=124, Expect=2e-32]} {Dmel: FBgn0031914, CG5973, [RH, Score=119, Expect=7e-31]} {Smed: dd_Smed_v6_12402_0_1, dd_Smed_v6_12402_0_1, [Score=102, Expect=1e-25]} {RNA1509_17560, RNA1509_50242} {RNA1310_12966, RNA1509_17560, RNA1509_50242} {RNA1509_17560, RNA1509_50242, RNA815_9435}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_52815

137

2.86

Mlig455_047847

Neo: -

Age: Down-Up-Down

CLVS1

Mlig455_047847 {REF} {Length: 2198} {TRANSSPLICED} {Pfam: CRAL/TRIO domain [PF00650.22, score=68.5]; Divergent CRAL/TRIO domain [PF13716.8, score=25.3]} {Human: ENSG00000177182, CLVS1, clavesin 1, [Score=124, Expect=3e-32]} {Mouse: ENSMUSG00000039194, Rlbp1, retinaldehyde binding protein 1, [Score=129, Expect=2e-34]; ENSMUSG00000041216, Clvs1, clavesin 1, [Score=124, Expect=2e-32]} {Dmel: FBgn0031914, CG5973, [RH, Score=119, Expect=7e-31]} {Smed: dd_Smed_v6_12402_0_1, dd_Smed_v6_12402_0_1, [Score=102, Expect=1e-25]} {RNA1509_17560, RNA1509_50242} {RNA1310_12966, RNA1509_17560, RNA1509_50242} {RNA1509_17560, RNA1509_50242, RNA815_9435}

Cumulative graph for MligTC455_52815

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.207	2.32	0.80784	1.00000
RegionR2	0.196	2.32	0.71868	1.00000
RegionR3	0.252	2.32	0.66688	1.00000
RegionR4	2.17	2.32	0.01265	0.07261
RegionR5	0.542	2.32	0.47192	0.83473
RegionR6	2.085	2.32	0.00498	0.10813
RegionR7	0.553	2.32	0.54810	1.00000
RegionR8	-6.005	2.32	0.02826	0.32840

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-4.54	2.32	0.46253	1.00000
RegenerationR2	0.568	2.32	0.38375	0.80391
RegenerationR3	1.417	2.32	0.04364	0.36493
RegenerationR4	-0.846	2.32	0.24158	0.69044
RegenerationR5	0.498	2.32	0.44383	0.82695
RegenerationR6	-0.753	2.32	0.27421	0.62353
RegenerationBL	-0.038	2.32	0.81252	1.00000
RegenerationTP	2.226	2.32	0.29372	0.73913

Genes with expression patterns similar to MligTC455_52815

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_52815	137	2.86	Mlig455_047847	Neo: - Age: Down-Up-Down	CLVS1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_047847 {REF} {Length: 2198} {TRANSSPLICED} {Pfam: CRAL/TRIO domain [PF00650.22, score=68.5]; Divergent CRAL/TRIO domain [PF13716.8, score=25.3]} {Human: ENSG00000177182, CLVS1, clavesin 1, [Score=124, Expect=3e-32]} {Mouse: ENSMUSG00000039194, Rlbp1, retinaldehyde binding protein 1, [Score=129, Expect=2e-34]; ENSMUSG00000041216, Clvs1, clavesin 1, [Score=124, Expect=2e-32]} {Dmel: FBgn0031914, CG5973, [RH, Score=119, Expect=7e-31]} {Smed: dd_Smed_v6_12402_0_1, dd_Smed_v6_12402_0_1, [Score=102, Expect=1e-25]} {RNA1509_17560, RNA1509_50242} {RNA1310_12966, RNA1509_17560, RNA1509_50242} {RNA1509_17560, RNA1509_50242, RNA815_9435}
2.	MligTC455_07920	131	2.73	Mlig455_029217	Neo: - Age: - Region-enriched R6: 5.473/0.00039	OSR1	1.678	0.954	-	-	-	-	0.724	Mlig455_029217 {REF} {Length: 1175} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=54.3]; Zinc-finger double domain [PF13465.8, score=46.0]; C2H2-type zinc finger [PF13894.8, score=40.7]; C2H2-type zinc finger [PF13912.8, score=28.1]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=24.7]} {Human: ENSG00000143867, OSR1, odd-skipped related transciption factor 1, [RH, Score=178, Expect=8e-55]; ENSG00000164920, OSR2, odd-skipped related transciption factor 2, [RH, Score=171, Expect=1e-51]} {Mouse: ENSMUSG00000048387, Osr1, odd-skipped related transcription factor 1, [RH, Score=176, Expect=3e-54]; ENSMUSG00000022330, Osr2, odd-skipped related 2, [RH, Score=171, Expect=5e-52]} {Dmel: FBgn0002985, odd, odd skipped, [RH, Score=159, Expect=2e-46]} {Celegans: WBGene00003846, odd-2, Protein odd-skipped-related 2, [RH, Score=170, Expect=4e-52]} {Smed: dd_Smed_v6_10039_0_1, dd_Smed_v6_10039_0_1, [RH, Score=189, Expect=3e-59]} {RNA1509_57522} {RNA1310_38770} {RNA815_13682.1}
3.	MligTC455_48647	99	2.07	Mlig455_053994	Neo: - Age: -	ASIC5	0.956	-	-	-	-	0.956	-	Mlig455_053994 {REF} {Length: 2559} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=165.2]} {Human: ENSG00000256394, ASIC5, acid sensing ion channel subunit family member 5, [Score=53.1, Expect=1e-06]; ENSG00000262505, AC093830.1, acid sensing ion channel subunit family member 5, [Score=53.1, Expect=9e-07]; ENSG00000213199, ASIC3, acid sensing ion channel subunit 3, [Score=52.8, Expect=1e-06]} {Mouse: ENSMUSG00000028008, Asic5, acid-sensing (proton-gated) ion channel family member 5, [Score=56.2, Expect=9e-08]; ENSMUSG00000038276, Asic3, acid-sensing (proton-gated) ion channel 3, [Score=55.1, Expect=2e-07]} {Celegans: WBGene00012116, del-4, DEgenerin Like, [Score=63.2, Expect=3e-10]} {Smed: dd_Smed_v6_22533_0_1, dd_Smed_v6_22533_0_1, [Score=79.3, Expect=2e-15]} {RNA1509_35422} {RNA1310_9082.1} {RNA815_4853}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_52815

137

2.86

Mlig455_047847

Neo: -

Age: Down-Up-Down

CLVS1

1.000

MligTC455_07920

131

2.73

Mlig455_029217

Neo: -

Age: -

Region-enriched R6: 5.473/0.00039

OSR1

1.678

0.954

0.724

Mlig455_029217 {REF} {Length: 1175} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=54.3]; Zinc-finger double domain [PF13465.8, score=46.0]; C2H2-type zinc finger [PF13894.8, score=40.7]; C2H2-type zinc finger [PF13912.8, score=28.1]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=24.7]} {Human: ENSG00000143867, OSR1, odd-skipped related transciption factor 1, [RH, Score=178, Expect=8e-55]; ENSG00000164920, OSR2, odd-skipped related transciption factor 2, [RH, Score=171, Expect=1e-51]} {Mouse: ENSMUSG00000048387, Osr1, odd-skipped related transcription factor 1, [RH, Score=176, Expect=3e-54]; ENSMUSG00000022330, Osr2, odd-skipped related 2, [RH, Score=171, Expect=5e-52]} {Dmel: FBgn0002985, odd, odd skipped, [RH, Score=159, Expect=2e-46]} {Celegans: WBGene00003846, odd-2, Protein odd-skipped-related 2, [RH, Score=170, Expect=4e-52]} {Smed: dd_Smed_v6_10039_0_1, dd_Smed_v6_10039_0_1, [RH, Score=189, Expect=3e-59]} {RNA1509_57522} {RNA1310_38770} {RNA815_13682.1}

MligTC455_48647

2.07

Mlig455_053994

Neo: -

Age: -

ASIC5

0.956

Mlig455_053994 {REF} {Length: 2559} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=165.2]} {Human: ENSG00000256394, ASIC5, acid sensing ion channel subunit family member 5, [Score=53.1, Expect=1e-06]; ENSG00000262505, AC093830.1, acid sensing ion channel subunit family member 5, [Score=53.1, Expect=9e-07]; ENSG00000213199, ASIC3, acid sensing ion channel subunit 3, [Score=52.8, Expect=1e-06]} {Mouse: ENSMUSG00000028008, Asic5, acid-sensing (proton-gated) ion channel family member 5, [Score=56.2, Expect=9e-08]; ENSMUSG00000038276, Asic3, acid-sensing (proton-gated) ion channel 3, [Score=55.1, Expect=2e-07]} {Celegans: WBGene00012116, del-4, DEgenerin Like, [Score=63.2, Expect=3e-10]} {Smed: dd_Smed_v6_22533_0_1, dd_Smed_v6_22533_0_1, [Score=79.3, Expect=2e-15]} {RNA1509_35422} {RNA1310_9082.1} {RNA815_4853}