M. lignano Tomo-Seq
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Results for MligTC455_52824

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_52824 1225 25.52 Mlig455_061275

Neo: -

Age: -

 USE1 Mlig455_061275 {REF} {Length: 1153} {TRANSSPLICED} {Pfam: Membrane fusion protein Use1 [PF09753.11, score=153.2]} {Human: ENSG00000053501, USE1, unconventional SNARE in the ER 1, [RH, Score=83.6, Expect=5e-18]} {Mouse: ENSMUSG00000002395, Use1, unconventional SNARE in the ER 1 homolog (S. cerevisiae), [RH, Score=78.6, Expect=3e-16]} {Dmel: FBgn0035965, Use1, Unconventional SNARE in the ER 1, [RH, Score=78.2, Expect=2e-16]} {RNA1509_10490} {RNA1310_27716.1, RNA1509_10490} {RNA1509_10490, RNA815_34426}

Cumulative graph for MligTC455_52824

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.981 4.801 0.22705 0.87116
RegionR2 -0.131 4.801 0.72673 1.00000
RegionR3 0.006 4.801 0.98376 1.00000
RegionR4 -0.345 4.801 0.32106 0.63786
RegionR5 0.611 4.801 0.02726 0.12089
RegionR6 0.26 4.801 0.40295 0.97390
RegionR7 0.27 4.801 0.48449 1.00000
RegionR8 0.311 4.801 0.50751 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.845 4.801 0.51354 1.00000
RegenerationR2 -0.14 4.801 0.67136 0.94588
RegenerationR3 -0.006 4.801 0.98636 1.00000
RegenerationR4 0.305 4.801 0.37879 0.80062
RegenerationR5 -0.074 4.801 0.81140 0.99200
RegenerationR6 -0.339 4.801 0.34018 0.68621
RegenerationBL -0.723 4.801 0.07654 0.32303
RegenerationTP -0.051 4.801 0.90236 1.00000


Genes with expression patterns similar to MligTC455_52824

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_52824 1225 25.52 Mlig455_061275

Neo: -

Age: -

 USE1 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_061275 {REF} {Length: 1153} {TRANSSPLICED} {Pfam: Membrane fusion protein Use1 [PF09753.11, score=153.2]} {Human: ENSG00000053501, USE1, unconventional SNARE in the ER 1, [RH, Score=83.6, Expect=5e-18]} {Mouse: ENSMUSG00000002395, Use1, unconventional SNARE in the ER 1 homolog (S. cerevisiae), [RH, Score=78.6, Expect=3e-16]} {Dmel: FBgn0035965, Use1, Unconventional SNARE in the ER 1, [RH, Score=78.2, Expect=2e-16]} {RNA1509_10490} {RNA1310_27716.1, RNA1509_10490} {RNA1509_10490, RNA815_34426}
2. MligTC455_52825 458 9.53 Mlig455_061311

Neo: -

Age: -

 USE1 3.51 0.964 0.790 - 0.863 0.893 - Mlig455_061311 {REF} {Length: 1166} {TRANSSPLICED} {Pfam: Membrane fusion protein Use1 [PF09753.11, score=152.4]} {Human: ENSG00000053501, USE1, unconventional SNARE in the ER 1, [RH, Score=83.6, Expect=6e-18]} {Mouse: ENSMUSG00000002395, Use1, unconventional SNARE in the ER 1 homolog (S. cerevisiae), [RH, Score=78.6, Expect=4e-16]} {Dmel: FBgn0035965, Use1, Unconventional SNARE in the ER 1, [RH, Score=77.8, Expect=3e-16]} {RNA1509_10490} {RNA1310_27716.1} {RNA815_34426}
3. MligTC455_09703 1444 30.09 Mlig455_013166

Neo: -

Age: -

 ACAD9 0.956 - - - - - 0.956 Mlig455_013166 {REF} {Length: 2195} {TRANSSPLICED} {Pfam: Acyl-CoA dehydrogenase, middle domain [PF02770.21, score=63.8]; Acyl-CoA dehydrogenase, C-terminal domain [PF00441.26, score=57.4]; Acyl-CoA dehydrogenase, C-terminal domain [PF08028.13, score=26.2]} {Human: ENSG00000177646, ACAD9, acyl-CoA dehydrogenase family member 9, [Score=271, Expect=1e-81]} {Mouse: ENSMUSG00000027710, Acad9, acyl-Coenzyme A dehydrogenase family, member 9, [Score=267, Expect=3e-80]} {Dmel: FBgn0034432, CG7461, [Score=186, Expect=1e-50]} {Celegans: WBGene00017125, acdh-12, Acyl CoA DeHydrogenase, [Score=182, Expect=4e-49]} {Smed: dd_Smed_v6_2663_0_1, dd_Smed_v6_2663_0_1, [Score=186, Expect=1e-50]} {RNA1509_7906} {RNA1310_11262, RNA1509_7906} {RNA1509_7906, RNA815_3580}

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