Data search


search
Exact
Search

Results for MligTC455_52975

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_52975 190 3.95 Mlig455_015165

Neo: -

Age: -

UHRF1BP1L Mlig455_015165 {REF} {Length: 5862} {Pfam: N-terminal region of Chorein or VPS13 [PF12624.9, score=51.2]} {Human: ENSG00000111647, UHRF1BP1L, UHRF1 binding protein 1 like, [RH, Score=384, Expect=6e-111]} {Mouse: ENSMUSG00000019951, Uhrf1bp1l, UHRF1 (ICBP90) binding protein 1-like, [Score=382, Expect=2e-110]} {Dmel: FBgn0083962, CG34126, [RH, Score=275, Expect=7e-75]} {Celegans: WBGene00008094, C44H4.4, [RH, Score=239, Expect=1e-64]} {Smed: dd_Smed_v6_11401_0_1, dd_Smed_v6_11401_0_1, [RH, Score=389, Expect=1e-114]} {RNA1509_35214} {RNA1310_1848, RNA1509_35214} {RNA1509_35214, RNA815_13482}

Cumulative graph for MligTC455_52975

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -6.272 2.561 0.12533 0.72017
RegionR2 0.142 2.561 0.80998 1.00000
RegionR3 0.107 2.561 0.82276 1.00000
RegionR4 2.38 2.561 0.03942 0.16387
RegionR5 1.335 2.561 0.17382 0.44547
RegionR6 1.288 2.561 0.19669 0.76556
RegionR7 1.795 2.561 0.08319 0.55552
RegionR8 -0.776 2.561 0.97916 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.562 2.561 1.00000 1.00000
RegenerationR2 0.185 2.561 0.76885 0.97995
RegenerationR3 0.692 2.561 0.36749 0.78231
RegenerationR4 -0.34 2.561 0.69325 0.95070
RegenerationR5 -0.146 2.561 0.85567 1.00000
RegenerationR6 -0.101 2.561 0.88250 1.00000
RegenerationBL -0.11 2.561 0.91596 1.00000
RegenerationTP -0.067 2.561 0.96528 1.00000


Genes with expression patterns similar to MligTC455_52975

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_52975 190 3.95 Mlig455_015165

Neo: -

Age: -

UHRF1BP1L 5 - 1.000 1.000 1.000 1.000 1.000 Mlig455_015165 {REF} {Length: 5862} {Pfam: N-terminal region of Chorein or VPS13 [PF12624.9, score=51.2]} {Human: ENSG00000111647, UHRF1BP1L, UHRF1 binding protein 1 like, [RH, Score=384, Expect=6e-111]} {Mouse: ENSMUSG00000019951, Uhrf1bp1l, UHRF1 (ICBP90) binding protein 1-like, [Score=382, Expect=2e-110]} {Dmel: FBgn0083962, CG34126, [RH, Score=275, Expect=7e-75]} {Celegans: WBGene00008094, C44H4.4, [RH, Score=239, Expect=1e-64]} {Smed: dd_Smed_v6_11401_0_1, dd_Smed_v6_11401_0_1, [RH, Score=389, Expect=1e-114]} {RNA1509_35214} {RNA1310_1848, RNA1509_35214} {RNA1509_35214, RNA815_13482}
2. MligTC455_27001 269 5.6 Mlig455_015615

Neo: -

Age: -

NAV2 1.695 - - - 0.716 0.979 - Mlig455_015615 {REF} {Length: 5528} {TRANSSPLICED} {Human: ENSG00000166833, NAV2, neuron navigator 2, [Score=511, Expect=1e-151]} {Mouse: ENSMUSG00000052512, Nav2, neuron navigator 2, [Score=501, Expect=2e-148]; ENSMUSG00000020181, Nav3, neuron navigator 3, [Score=476, Expect=6e-140]} {Dmel: FBgn0263873, sick, sickie, [Score=358, Expect=1e-102]} {Celegans: WBGene00006788, unc-53, Adapter protein unc-53, [Score=140, Expect=3e-33]} {Smed: dd_Smed_v6_7701_0_2, dd_Smed_v6_7701_0_2, [Score=433, Expect=2e-128]} {RNA1509_12417} {RNA1310_596.1} {RNA815_2589}
3. MligTC455_28462 236 4.91 Mlig455_007790

Neo: -

Age: -

1.662 - 0.708 - - 0.954 - Mlig455_007790 {REF} {Length: 1924} {RNA1509_24727} {RNA1310_9330} {RNA815_6709}
4. MligTC455_42601 438 9.12 Mlig455_019930

Neo: -

Age: -

Region-enriched R7: 1.726/0.03073

0.969 - - - - 0.969 - Mlig455_019930 {REF} {Length: 618} {TRANSSPLICED} {Pfam: PLAC8 family [PF04749.19, score=78.5]} {Smed: dd_Smed_v6_477_0_1, dd_Smed_v6_477_0_1, [RH, Score=129, Expect=2e-40]} {RNA1509_14839} {RNA1310_21645} {RNA815_8854.1}
5. MligTC455_23941 1026 21.38 Mlig455_066720, Mlig455_069105

Neo: -

Age: -

PRR9 0.957 - - - 0.957 - -

Mlig455_066720 {REF} {Length: 2325} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=49.3, Expect=7e-08]} {RNA1509_33031, RNA1509_44931, RNA1509_55201, RNA1509_5894} {RNA1310_5847.1, RNA1509_33031, RNA1509_44931, RNA1509_55201} {RNA1509_33031, RNA1509_44931, RNA1509_55201, RNA815_1576.1}

Mlig455_069105 {REF} {Length: 2982} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=51.2, Expect=2e-08]} {RNA1509_5894} {RNA1310_33009} {RNA815_1576.1}
6. MligTC455_02515 538 11.21 Mlig455_036260, Mlig455_054531, Mlig455_055383

Neo: -

Age: -

0.955 - - - - 0.955 -

Mlig455_036260 {REF} {Length: 1371} {RNA1509_27757} {RNA1310_64500.1} {RNA815_18682}

Mlig455_054531 {REF} {Length: 1625} {RNA1509_27757} {RNA1310_62804} {RNA815_18682}

Mlig455_055383 {REF} {Length: 1697} {RNA1509_27757} {RNA1310_62804, RNA1509_27757} {RNA1509_27757, RNA815_18682}
7. MligTC455_49964 650 13.53 Mlig455_068163

Neo: Irradiation

Age: -

Region-specific R4: 2.893

Region-enriched R4: 1.519/0.00162

AGRN 0.954 - - - 0.954 - - Mlig455_068163 {REF} {Length: 4154} {Pfam: Kazal-type serine protease inhibitor domain [PF07648.17, score=143.9]; Kazal-type serine protease inhibitor domain [PF00050.23, score=74.6]} {Human: ENSG00000188157, AGRN, agrin, [Score=100, Expect=1e-21]} {Mouse: ENSMUSG00000041936, Agrn, agrin, [Score=111, Expect=9e-26]} {Dmel: FBgn0052354, CG32354, [Score=62.4, Expect=4e-10]} {Celegans: WBGene00018304, agr-1, AGRin (Synaptic protein) homolog; AGRin (Synaptic protein) homolog family member, [Score=139, Expect=3e-35]} {Smed: dd_Smed_v6_3649_0_1, dd_Smed_v6_3649_0_1, [Score=160, Expect=1e-42]} {RNA1509_14157, RNA1509_47154} {RNA1310_33618.1, RNA1509_14157, RNA1509_47154} {RNA1509_14157, RNA1509_47154, RNA815_11942}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA