TomoSeq data search

Data search

Results for MligTC455_53065

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_53065	434	9.05	Mlig455_022215	Neo: - Age: - Region-enriched R5: 1.086/0.03332	TOPORS	Mlig455_022215 {REF} {Length: 4565} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=31.0]; Ring finger domain [PF13639.8, score=25.1]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=23.7]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=20.3]} {Human: ENSG00000197579, TOPORS, TOP1 binding arginine/serine rich protein, [Score=80.1, Expect=1e-14]} {Mouse: ENSMUSG00000036822, Topors, topoisomerase I binding, arginine/serine-rich, [Score=87.0, Expect=4e-17]} {Dmel: FBgn0267351, Topors, Topoisomerase I-interacting protein, [Score=92.4, Expect=7e-19]} {Smed: dd_Smed_v6_18055_0_1, dd_Smed_v6_18055_0_1, [RH, Score=49.7, Expect=4e-06]} {RNA1509_20302, RNA1509_28214} {RNA1310_7655, RNA1509_20302, RNA1509_28214} {RNA1509_20302, RNA1509_28214, RNA815_4276}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_53065

434

9.05

Mlig455_022215

Neo: -

Age: -

Region-enriched R5: 1.086/0.03332

TOPORS

Mlig455_022215 {REF} {Length: 4565} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=31.0]; Ring finger domain [PF13639.8, score=25.1]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=23.7]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=20.3]} {Human: ENSG00000197579, TOPORS, TOP1 binding arginine/serine rich protein, [Score=80.1, Expect=1e-14]} {Mouse: ENSMUSG00000036822, Topors, topoisomerase I binding, arginine/serine-rich, [Score=87.0, Expect=4e-17]} {Dmel: FBgn0267351, Topors, Topoisomerase I-interacting protein, [Score=92.4, Expect=7e-19]} {Smed: dd_Smed_v6_18055_0_1, dd_Smed_v6_18055_0_1, [RH, Score=49.7, Expect=4e-06]} {RNA1509_20302, RNA1509_28214} {RNA1310_7655, RNA1509_20302, RNA1509_28214} {RNA1509_20302, RNA1509_28214, RNA815_4276}

Cumulative graph for MligTC455_53065

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.323	3.692	0.36085	1.00000
RegionR2	0.284	3.692	0.61307	0.95994
RegionR3	0.989	3.692	0.02077	0.24210
RegionR4	0.454	3.692	0.35953	0.68229
RegionR5	1.086	3.692	0.00475	0.03332
RegionR6	0.138	3.692	0.77117	1.00000
RegionR7	-0.215	3.692	0.74024	1.00000
RegionR8	-1.413	3.692	0.13344	0.66856

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-5.478	3.692	0.30657	0.99989
RegenerationR2	0.4	3.692	0.35020	0.78180
RegenerationR3	-0.229	3.692	0.60837	0.91187
RegenerationR4	-0.291	3.692	0.54217	0.88942
RegenerationR5	-0.601	3.692	0.14137	0.55473
RegenerationR6	0.741	3.692	0.11335	0.41457
RegenerationBL	-0.219	3.692	0.77401	1.00000
RegenerationTP	0.93	3.692	0.21129	0.65418

Genes with expression patterns similar to MligTC455_53065

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_53065	434	9.05	Mlig455_022215	Neo: - Age: - Region-enriched R5: 1.086/0.03332	TOPORS	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_022215 {REF} {Length: 4565} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=31.0]; Ring finger domain [PF13639.8, score=25.1]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=23.7]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=20.3]} {Human: ENSG00000197579, TOPORS, TOP1 binding arginine/serine rich protein, [Score=80.1, Expect=1e-14]} {Mouse: ENSMUSG00000036822, Topors, topoisomerase I binding, arginine/serine-rich, [Score=87.0, Expect=4e-17]} {Dmel: FBgn0267351, Topors, Topoisomerase I-interacting protein, [Score=92.4, Expect=7e-19]} {Smed: dd_Smed_v6_18055_0_1, dd_Smed_v6_18055_0_1, [RH, Score=49.7, Expect=4e-06]} {RNA1509_20302, RNA1509_28214} {RNA1310_7655, RNA1509_20302, RNA1509_28214} {RNA1509_20302, RNA1509_28214, RNA815_4276}
2.	MligTC455_13047	662	13.78	Mlig455_043461	Neo: - Age: - Region-enriched R6: 1.614/0.00009		0.976	-	-	-	-	0.976	-	Mlig455_043461 {REF} {Length: 3112} {Pfam: PMP-22/EMP/MP20/Claudin tight junction [PF13903.8, score=48.4]; Lipoma HMGIC fusion partner-like protein [PF10242.11, score=24.0]} {Dmel: FBgn0010894, sinu, sinuous, [RH, Score=100, Expect=4e-25]} {Smed: dd_Smed_v6_2132_0_1, dd_Smed_v6_2132_0_1, [RH, Score=201, Expect=8e-64]} {RNA1509_30798, RNA1509_31427, RNA1509_60124} {RNA1310_20953.2, RNA1509_30798, RNA1509_31427, RNA1509_60124} {RNA1509_30798, RNA1509_31427, RNA1509_60124, RNA815_18897.1}
3.	MligTC455_32410	120	2.5	Mlig455_050637	Neo: - Age: Down-Up-Up	FOXG1	0.96	-	-	-	-	0.960	-	Mlig455_050637 {REF} {Length: 1174} {Pfam: Forkhead domain [PF00250.20, score=130.6]} {Human: ENSG00000176165, FOXG1, forkhead box G1, [Score=192, Expect=2e-57]} {Mouse: ENSMUSG00000020950, Foxg1, forkhead box G1, [Score=193, Expect=4e-58]} {Dmel: FBgn0004567, slp2, sloppy paired 2, [Score=198, Expect=2e-60]} {Celegans: WBGene00001434, fkh-2, ForKHead transcription factor family, [RH, Score=191, Expect=1e-59]} {Smed: dd_Smed_v6_16466_0_1, dd_Smed_v6_16466_0_1, [Score=151, Expect=2e-45]} {RNA1310_31219} {RNA815_15954.1}
4.	MligTC455_11496	45	0.94	Mlig455_038429	Neo: - Age: -		0.953	-	-	-	-	0.953	-	Mlig455_038429 {REF} {Length: 603} {NoTransDecoderORF} {RNA1509_51837} {RNA1310_8956.1} {RNA815_41033.2}
5.	MligTC455_46145	186	3.88	Mlig455_037570	Neo: - Age: logFC(26M/2M)=0.895		0.95	-	-	-	-	0.950	-	Mlig455_037570 {REF} {Length: 3501} {TRANSSPLICED} {RNA1509_46246} {RNA1310_41200} {RNA815_8606}