TomoSeq data search

Data search

Results for MligTC455_53104

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_53104	130	2.71	Mlig455_024146, Mlig455_024157	Neo: - Age: -	CHRNA10, CHRNA6	Mlig455_024146 {REF} {Length: 4155} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=157.9]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=80.0]} {Human: ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=191, Expect=1e-54]; ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=191, Expect=5e-55]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=189, Expect=1e-53]; ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=187, Expect=5e-53]} {Mouse: ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=196, Expect=2e-56]; ENSMUSG00000066279, Chrna10, cholinergic receptor, nicotinic, alpha polypeptide 10, [Score=194, Expect=2e-56]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=192, Expect=4e-55]} {Dmel: FBgn0266347, nAChRalpha4, nicotinic Acetylcholine Receptor alpha4, [Score=200, Expect=3e-58]} {Celegans: WBGene00006797, unc-63, Acetylcholine receptor subunit alpha-type unc-63, [Score=188, Expect=6e-54]} {Smed: dd_Smed_v6_2019_0_1, dd_Smed_v6_2019_0_1, [Score=337, Expect=2e-111]} {RNA1509_35396} {RNA1310_25168.1} {RNA815_2979.1} Mlig455_024157 {REF} {Length: 3920} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=157.6]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=79.9]} {Human: ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=191, Expect=1e-54]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=190, Expect=5e-54]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=189, Expect=1e-53]; ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=186, Expect=1e-52]} {Mouse: ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=194, Expect=8e-56]; ENSMUSG00000066279, Chrna10, cholinergic receptor, nicotinic, alpha polypeptide 10, [Score=193, Expect=6e-56]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=193, Expect=3e-55]; ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=186, Expect=8e-53]} {Dmel: FBgn0266347, nAChRalpha4, nicotinic Acetylcholine Receptor alpha4, [Score=205, Expect=5e-60]} {Celegans: WBGene00006797, unc-63, Acetylcholine receptor subunit alpha-type unc-63, [Score=188, Expect=1e-53]} {Smed: dd_Smed_v6_2019_0_1, dd_Smed_v6_2019_0_1, [Score=332, Expect=1e-109]} {RNA1509_35396} {RNA1310_25168.1} {RNA815_2979.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_53104

130

2.71

Mlig455_024146, Mlig455_024157

Neo: -

Age: -

CHRNA10, CHRNA6

Mlig455_024146 {REF} {Length: 4155} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=157.9]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=80.0]} {Human: ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=191, Expect=1e-54]; ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=191, Expect=5e-55]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=189, Expect=1e-53]; ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=187, Expect=5e-53]} {Mouse: ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=196, Expect=2e-56]; ENSMUSG00000066279, Chrna10, cholinergic receptor, nicotinic, alpha polypeptide 10, [Score=194, Expect=2e-56]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=192, Expect=4e-55]} {Dmel: FBgn0266347, nAChRalpha4, nicotinic Acetylcholine Receptor alpha4, [Score=200, Expect=3e-58]} {Celegans: WBGene00006797, unc-63, Acetylcholine receptor subunit alpha-type unc-63, [Score=188, Expect=6e-54]} {Smed: dd_Smed_v6_2019_0_1, dd_Smed_v6_2019_0_1, [Score=337, Expect=2e-111]} {RNA1509_35396} {RNA1310_25168.1} {RNA815_2979.1}

Mlig455_024157 {REF} {Length: 3920} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=157.6]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=79.9]} {Human: ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=191, Expect=1e-54]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=190, Expect=5e-54]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=189, Expect=1e-53]; ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=186, Expect=1e-52]} {Mouse: ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=194, Expect=8e-56]; ENSMUSG00000066279, Chrna10, cholinergic receptor, nicotinic, alpha polypeptide 10, [Score=193, Expect=6e-56]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=193, Expect=3e-55]; ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=186, Expect=8e-53]} {Dmel: FBgn0266347, nAChRalpha4, nicotinic Acetylcholine Receptor alpha4, [Score=205, Expect=5e-60]} {Celegans: WBGene00006797, unc-63, Acetylcholine receptor subunit alpha-type unc-63, [Score=188, Expect=1e-53]} {Smed: dd_Smed_v6_2019_0_1, dd_Smed_v6_2019_0_1, [Score=332, Expect=1e-109]} {RNA1509_35396} {RNA1310_25168.1} {RNA815_2979.1}

Cumulative graph for MligTC455_53104

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.939	2.084	0.60618	1.00000
RegionR2	1.311	2.084	0.31570	0.70658
RegionR3	0.126	2.084	0.80826	1.00000
RegionR4	1.24	2.084	0.38286	0.70746
RegionR5	-0.059	2.084	0.87954	1.00000
RegionR6	-2.289	2.084	0.99972	1.00000
RegionR7	1.531	2.084	0.24679	0.87320
RegionR8	1.08	2.084	0.46154	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.344	2.084	0.99995	1.00000
RegenerationR2	-0.88	2.084	0.37728	0.80010
RegenerationR3	0.269	2.084	0.81901	0.98723
RegenerationR4	-0.082	2.084	0.94073	1.00000
RegenerationR5	0.555	2.084	0.61535	0.91670
RegenerationR6	1.574	2.084	0.28900	0.63908
RegenerationBL	1.373	2.084	0.26796	0.62708
RegenerationTP	0.893	2.084	0.46070	0.87453

Genes with expression patterns similar to MligTC455_53104

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_53104	130	2.71	Mlig455_024146, Mlig455_024157	Neo: - Age: -	CHRNA10, CHRNA6	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_024146 {REF} {Length: 4155} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=157.9]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=80.0]} {Human: ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=191, Expect=1e-54]; ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=191, Expect=5e-55]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=189, Expect=1e-53]; ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=187, Expect=5e-53]} {Mouse: ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=196, Expect=2e-56]; ENSMUSG00000066279, Chrna10, cholinergic receptor, nicotinic, alpha polypeptide 10, [Score=194, Expect=2e-56]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=192, Expect=4e-55]} {Dmel: FBgn0266347, nAChRalpha4, nicotinic Acetylcholine Receptor alpha4, [Score=200, Expect=3e-58]} {Celegans: WBGene00006797, unc-63, Acetylcholine receptor subunit alpha-type unc-63, [Score=188, Expect=6e-54]} {Smed: dd_Smed_v6_2019_0_1, dd_Smed_v6_2019_0_1, [Score=337, Expect=2e-111]} {RNA1509_35396} {RNA1310_25168.1} {RNA815_2979.1} Mlig455_024157 {REF} {Length: 3920} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=157.6]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=79.9]} {Human: ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=191, Expect=1e-54]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=190, Expect=5e-54]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=189, Expect=1e-53]; ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=186, Expect=1e-52]} {Mouse: ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=194, Expect=8e-56]; ENSMUSG00000066279, Chrna10, cholinergic receptor, nicotinic, alpha polypeptide 10, [Score=193, Expect=6e-56]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=193, Expect=3e-55]; ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=186, Expect=8e-53]} {Dmel: FBgn0266347, nAChRalpha4, nicotinic Acetylcholine Receptor alpha4, [Score=205, Expect=5e-60]} {Celegans: WBGene00006797, unc-63, Acetylcholine receptor subunit alpha-type unc-63, [Score=188, Expect=1e-53]} {Smed: dd_Smed_v6_2019_0_1, dd_Smed_v6_2019_0_1, [Score=332, Expect=1e-109]} {RNA1509_35396} {RNA1310_25168.1} {RNA815_2979.1}
2.	MligTC455_37629	75	1.56	Mlig455_051157	Neo: - Age: -		0.963	-	-	-	-	0.963	-	Mlig455_051157 {REF} {Length: 1499} {Pfam: Integrase core domain [PF00665.28, score=31.3]} {Smed: dd_Smed_v6_11155_0_2, dd_Smed_v6_11155_0_2, [Score=55.8, Expect=8e-10]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}
3.	MligTC455_43303	180	3.75	Mlig455_001813	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.918		0.954	-	-	-	-	0.954	-	Mlig455_001813 {REF} {Length: 2537} {RNA1509_14667} {RNA1310_23413} {RNA815_13658}
4.	MligTC455_28774	97	2.01	Mlig455_013476, Mlig455_033890, Mlig455_068702	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_013476 {REF} {Length: 260} {NoTransDecoderORF} {RNA1509_31462} {RNA1310_2574} {RNA815_18445} Mlig455_033890 {REF} {Length: 223} {NoTransDecoderORF} {RNA1509_31462} {RNA1310_23820} {RNA815_18445} Mlig455_068702 {REF} {Length: 77} {NoTransDecoderORF} {RNA1509_31462} {RNA1310_23820} {RNA815_37446}