TomoSeq data search

Data search

Results for MligTC455_53282

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_53282

140

2.91

Mlig455_004535

Neo: -

Age: logFC(26M/2M)=1.492

Mlig455_004535 {REF} {Length: 3090} {RNA1509_31205} {RNA1310_17001} {RNA815_22384}

Cumulative graph for MligTC455_53282

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.051	2.112	1.00000	1.00000
RegionR2	-0.991	2.112	0.89408	1.00000
RegionR3	-4.405	2.112	0.99964	1.00000
RegionR4	1.65	2.112	0.21622	0.50323
RegionR5	-0.349	2.112	0.75701	1.00000
RegionR6	0.697	2.112	0.39377	0.96805
RegionR7	2.15	2.112	0.08867	0.57075
RegionR8	2.299	2.112	0.12004	0.63800

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	3.828	2.112	0.52238	1.00000
RegenerationR2	2.034	2.112	0.05341	0.38086
RegenerationR3	4.476	2.112	0.01070	0.18920
RegenerationR4	1.155	2.112	0.36154	0.78814
RegenerationR5	1.816	2.112	0.13057	0.53637
RegenerationR6	0.952	2.112	0.43895	0.76307
RegenerationBL	0.816	2.112	0.50975	0.87348
RegenerationTP	-0.757	2.112	0.54593	0.93061

Genes with expression patterns similar to MligTC455_53282

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_53282	140	2.91	Mlig455_004535	Neo: - Age: logFC(26M/2M)=1.492		4	-	-	1.000	1.000	1.000	1.000	Mlig455_004535 {REF} {Length: 3090} {RNA1509_31205} {RNA1310_17001} {RNA815_22384}
2.	MligTC455_12795	29	0.6	Mlig455_018625	Neo: - Age: -		1.722	-	-	-	0.961	0.761	-	Mlig455_018625 {REF} {Length: 2962} {NoTransDecoderORF} {RNA1509_31653} {RNA1310_61132.1} {RNA815_20852}
3.	MligTC455_18479	293	6.11	Mlig455_029348	Neo: - Age: - Region-enriched R2: 2.256/0.00988		0.969	-	-	-	0.969	-	-	Mlig455_029348 {REF} {Length: 2771} {Pfam: Leucine Rich repeat [PF13516.8, score=43.0]} {Mouse: ENSMUSG00000099564, Gm28729, predicted gene 28729, [RH, Score=125, Expect=4e-31]} {Smed: dd_Smed_v6_16437_0_1, dd_Smed_v6_16437_0_1, [RH, Score=268, Expect=2e-84]} {RNA1509_18255, RNA1509_55057} {RNA1310_16954, RNA1509_18255, RNA1509_55057} {RNA1509_18255, RNA1509_55057, RNA815_6360}
4.	MligTC455_45543	2247	46.82	Mlig455_022882, Mlig455_022900	Neo: - Age: -	CHMP1A	0.95	-	-	-	-	0.950	-	Mlig455_022882 {REF} {Length: 1889} {TRANSSPLICED} {Pfam: Snf7 [PF03357.23, score=44.0]; Regulator of Vps4 activity in the MVB pathway [PF03398.16, score=20.5]} {Human: ENSG00000131165, CHMP1A, charged multivesicular body protein 1A, [RH, Score=225, Expect=9e-75]} {Mouse: ENSMUSG00000000743, Chmp1a, charged multivesicular body protein 1A, [RH, Score=225, Expect=7e-75]} {Dmel: FBgn0036805, Chmp1, Charged multivesicular body protein 1, [Score=155, Expect=3e-47]} {Celegans: WBGene00017735, did-2, Doa4-Independent Degradation, homologous to yeast Did2, [Score=167, Expect=3e-52]} {Smed: dd_Smed_v6_1645_0_1, dd_Smed_v6_1645_0_1, [RH, Score=249, Expect=2e-84]} {RNA1509_18465, RNA1509_3349} {RNA1310_38199, RNA1509_18465, RNA1509_3349} {RNA1509_18465, RNA1509_3349, RNA815_18786} Mlig455_022900 {REF} {Length: 1828} {TRANSSPLICED} {Pfam: Snf7 [PF03357.23, score=44.0]; Regulator of Vps4 activity in the MVB pathway [PF03398.16, score=20.5]} {Human: ENSG00000131165, CHMP1A, charged multivesicular body protein 1A, [RH, Score=225, Expect=9e-75]} {Mouse: ENSMUSG00000000743, Chmp1a, charged multivesicular body protein 1A, [RH, Score=225, Expect=7e-75]} {Dmel: FBgn0036805, Chmp1, Charged multivesicular body protein 1, [Score=155, Expect=3e-47]} {Celegans: WBGene00017735, did-2, Doa4-Independent Degradation, homologous to yeast Did2, [Score=167, Expect=3e-52]} {Smed: dd_Smed_v6_1645_0_1, dd_Smed_v6_1645_0_1, [RH, Score=249, Expect=2e-84]} {RNA1509_3349} {RNA1310_38199} {RNA815_18786}

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