TomoSeq data search

Data search

Results for MligTC455_53299

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_53299	168	3.49	Mlig455_025514	Neo: - Age: Up-Down-Down	PRKCA	Mlig455_025514 {REF} {Length: 4011} {Pfam: Protein kinase domain [PF00069.27, score=211.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=124.7]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=114.2]; C2 domain [PF00168.32, score=100.0]; Protein kinase C terminal domain [PF00433.26, score=23.5]; C1 domain [PF03107.18, score=22.5]} {Human: ENSG00000154229, PRKCA, protein kinase C alpha, [RH, Score=961, Expect=0.0]; ENSG00000166501, PRKCB, protein kinase C beta, [RH, Score=959, Expect=0.0]} {Mouse: ENSMUSG00000050965, Prkca, protein kinase C, alpha, [RH, Score=962, Expect=0.0]; ENSMUSG00000052889, Prkcb, protein kinase C, beta, [RH, Score=961, Expect=0.0]} {Dmel: FBgn0003091, Pkc53E, Protein C kinase 53E, [Score=924, Expect=0.0]} {Celegans: WBGene00004033, pkc-2, Protein kinase C-like 2, [RH, Score=914, Expect=0.0]} {Smed: dd_Smed_v6_4464_0_1, dd_Smed_v6_4464_0_1, [Score=998, Expect=0.0]} {RNA1509_44778} {RNA1310_7395} {RNA815_2012.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_53299

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-4.541	2.494	0.36367	1.00000
RegionR2	1.178	2.494	0.23684	0.61075
RegionR3	0.818	2.494	0.39516	0.92515
RegionR4	1.847	2.494	0.06558	0.23161
RegionR5	0.724	2.494	0.45417	0.81612
RegionR6	1.228	2.494	0.18016	0.74391
RegionR7	0.586	2.494	0.61255	1.00000
RegionR8	-1.84	2.494	0.99879	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.383	2.494	1.00000	1.00000
RegenerationR2	-0.385	2.494	0.42664	0.83205
RegenerationR3	-0.056	2.494	0.91968	1.00000
RegenerationR4	-0.644	2.494	0.34268	0.77399
RegenerationR5	-0.492	2.494	0.43274	0.81981
RegenerationR6	0.035	2.494	0.96108	1.00000
RegenerationBL	0.511	2.494	0.62568	0.96790
RegenerationTP	1.738	2.494	0.13180	0.54597

Genes with expression patterns similar to MligTC455_53299

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_53299	168	3.49	Mlig455_025514	Neo: - Age: Up-Down-Down	PRKCA	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_025514 {REF} {Length: 4011} {Pfam: Protein kinase domain [PF00069.27, score=211.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=124.7]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=114.2]; C2 domain [PF00168.32, score=100.0]; Protein kinase C terminal domain [PF00433.26, score=23.5]; C1 domain [PF03107.18, score=22.5]} {Human: ENSG00000154229, PRKCA, protein kinase C alpha, [RH, Score=961, Expect=0.0]; ENSG00000166501, PRKCB, protein kinase C beta, [RH, Score=959, Expect=0.0]} {Mouse: ENSMUSG00000050965, Prkca, protein kinase C, alpha, [RH, Score=962, Expect=0.0]; ENSMUSG00000052889, Prkcb, protein kinase C, beta, [RH, Score=961, Expect=0.0]} {Dmel: FBgn0003091, Pkc53E, Protein C kinase 53E, [Score=924, Expect=0.0]} {Celegans: WBGene00004033, pkc-2, Protein kinase C-like 2, [RH, Score=914, Expect=0.0]} {Smed: dd_Smed_v6_4464_0_1, dd_Smed_v6_4464_0_1, [Score=998, Expect=0.0]} {RNA1509_44778} {RNA1310_7395} {RNA815_2012.1}
2.	MligTC455_18501	200	4.16	Mlig455_031954	Neo: - Age: Down-Up-Up		1.806	-	0.846	-	-	-	0.960	Mlig455_031954 {REF} {Length: 1030} {RNA1509_49054} {RNA1310_32906} {RNA815_15169}
3.	MligTC455_54213	234	4.87	Mlig455_063513	Neo: - Age: Up-Up-Down		1.692	-	-	0.721	-	-	0.971	Mlig455_063513 {REF} {Length: 3523} {TRANSSPLICED} {RNA1509_50863, RNA1509_57676} {RNA1310_29489, RNA1509_50863, RNA1509_57676} {RNA1509_50863, RNA1509_57676, RNA815_22674}
4.	MligTC455_22411	240	4.99	Mlig455_027900	Neo: - Age: -		1.655	-	-	0.703	-	-	0.952	Mlig455_027900 {REF} {Length: 3133} {RNA1509_30929, RNA1509_38512} {RNA1310_27672, RNA1509_30929, RNA1509_38512} {RNA1509_30929, RNA1509_38512, RNA815_26534}
5.	MligTC455_51601	185	3.85	Mlig455_025475	Neo: - Age: -		0.988	-	-	-	-	-	0.988	Mlig455_025475 {REF} {Length: 3495} {TRANSSPLICED} {RNA1509_42536} {RNA1310_9013} {RNA815_28709}
6.	MligTC455_29782	179	3.72	Mlig455_061628	Neo: - Age: Down-Down-Up	PXDN	0.975	-	-	-	-	-	0.975	Mlig455_061628 {REF} {Length: 4688} {Pfam: Leucine rich repeat [PF13855.8, score=86.3]; Leucine Rich repeats (2 copies) [PF12799.9, score=39.4]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=31.9]} {Human: ENSG00000130508, PXDN, peroxidasin, [Score=64.7, Expect=1e-09]} {Mouse: ENSMUSG00000020674, Pxdn, peroxidasin, [Score=62.0, Expect=6e-09]} {Dmel: FBgn0035575, CG7509, [Score=60.5, Expect=8e-09]} {Celegans: WBGene00006593, tol-1, TOLl (Drosophila) family, [Score=82.8, Expect=1e-15]} {RNA1509_13450} {RNA1310_1452.3} {RNA815_668}
7.	MligTC455_47226	202	4.22	Mlig455_012306	Neo: - Age: - Region-enriched R4: 2.582/0.02845		0.975	-	-	-	-	-	0.975	Mlig455_012306 {REF} {Length: 1104} {Celegans: WBGene00021577, Y46B2A.2, [Score=45.4, Expect=8e-07]} {Smed: dd_Smed_v6_49255_0_1, dd_Smed_v6_49255_0_1, [Score=44.3, Expect=3e-07]} {RNA1509_48023} {RNA1310_18058} {RNA815_356.1}
8.	MligTC455_52689	1538	32.04	Mlig455_021076	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.447	CCNG1	0.971	-	-	-	-	-	0.971	Mlig455_021076 {REF} {Length: 3931} {Pfam: Cyclin, N-terminal domain [PF00134.25, score=48.8]} {Human: ENSG00000113328, CCNG1, cyclin G1, [Score=89.4, Expect=2e-19]; ENSG00000138764, CCNG2, cyclin G2, [Score=89.0, Expect=3e-19]} {Mouse: ENSMUSG00000029385, Ccng2, cyclin G2, [Score=96.3, Expect=1e-21]} {Dmel: FBgn0039858, CycG, Cyclin G, [Score=92.0, Expect=8e-20]} {Smed: dd_Smed_v6_6866_0_1, dd_Smed_v6_6866_0_1, [Score=112, Expect=6e-28]} {RNA1509_14519, RNA1509_26087} {RNA1310_3032.1, RNA1509_14519, RNA1509_26087} {RNA1509_14519, RNA1509_26087, RNA815_5725}
9.	MligTC455_47659	628	13.09	Mlig455_022344	Neo: - Age: Down-Up-Down		0.97	-	-	-	-	0.970	-	Mlig455_022344 {REF} {Length: 1030} {RNA1509_16874} {RNA1310_1071.1} {RNA815_313.1}
10.	MligTC455_14007	86	1.79	Mlig455_025913	Neo: - Age: -		0.964	-	-	-	-	-	0.964	Mlig455_025913 {REF} {Length: 1361} {RNA1509_45083} {RNA1310_6827.1} {RNA815_12324}
11.	MligTC455_48061	590	12.29	Mlig455_000203	Neo: - Age: Down-Down-Up		0.964	-	-	-	-	-	0.964	Mlig455_000203 {REF} {Length: 963} {RNA1509_42285, RNA1509_52921} {RNA1310_38575, RNA1509_52921}
12.	MligTC455_52688	3728	77.66	Mlig455_007709, Mlig455_021042	Neo: - Age: logFC(26M/2M)=-0.638	CCNG1, CCNG2	0.962	-	-	-	-	-	0.962	Mlig455_007709 {REF} {Length: 4050} {Pfam: Cyclin, N-terminal domain [PF00134.25, score=48.8]} {Human: ENSG00000113328, CCNG1, cyclin G1, [Score=89.4, Expect=2e-19]; ENSG00000138764, CCNG2, cyclin G2, [Score=89.0, Expect=3e-19]} {Mouse: ENSMUSG00000029385, Ccng2, cyclin G2, [Score=96.3, Expect=1e-21]} {Dmel: FBgn0039858, CycG, Cyclin G, [Score=92.0, Expect=8e-20]} {Smed: dd_Smed_v6_6866_0_1, dd_Smed_v6_6866_0_1, [Score=112, Expect=6e-28]} {RNA1509_12052, RNA1509_15456, RNA1509_19486, RNA1509_23028, RNA1509_23511, RNA1509_24441, RNA1509_4826, RNA1509_9187} {RNA1310_3032.1, RNA1509_12052, RNA1509_15456, RNA1509_19486, RNA1509_23028, RNA1509_23511, RNA1509_24441, RNA1509_4826, RNA1509_9187} {RNA1509_12052, RNA1509_15456, RNA1509_19486, RNA1509_23028, RNA1509_23511, RNA1509_24441, RNA1509_4826, RNA1509_9187, RNA815_4720.1} Mlig455_021042 {REF} {Length: 4076} {Pfam: Cyclin, N-terminal domain [PF00134.25, score=49.0]} {Human: ENSG00000138764, CCNG2, cyclin G2, [Score=90.1, Expect=1e-19]; ENSG00000113328, CCNG1, cyclin G1, [Score=89.0, Expect=3e-19]} {Mouse: ENSMUSG00000029385, Ccng2, cyclin G2, [Score=97.4, Expect=5e-22]} {Dmel: FBgn0039858, CycG, Cyclin G, [Score=90.9, Expect=2e-19]} {Smed: dd_Smed_v6_6866_0_1, dd_Smed_v6_6866_0_1, [Score=113, Expect=4e-28]} {RNA1509_20782, RNA1509_2957} {RNA1310_3032.1, RNA1509_20782, RNA1509_2957} {RNA1509_20782, RNA1509_2957, RNA815_5725}
13.	MligTC455_51745	267	5.56	Mlig455_007920	Neo: - Age: -	FOXJ3	0.959	-	-	-	-	-	0.959	Mlig455_007920 {REF} {Length: 2476} {Pfam: Forkhead domain [PF00250.20, score=126.3]} {Human: ENSG00000198815, FOXJ3, forkhead box J3, [RH, Score=165, Expect=4e-46]} {Mouse: ENSMUSG00000032998, Foxj3, forkhead box J3, [RH, Score=164, Expect=5e-44]} {Dmel: FBgn0004567, slp2, sloppy paired 2, [Score=118, Expect=8e-29]} {Celegans: WBGene00001434, fkh-2, ForKHead transcription factor family, [Score=115, Expect=3e-29]} {Smed: dd_Smed_v6_12170_0_1, dd_Smed_v6_12170_0_1, [RH, Score=112, Expect=2e-26]} {RNA1509_19637, RNA1509_37021, RNA1509_41082} {RNA1310_12207, RNA1509_37021, RNA1509_41082} {RNA1509_37021, RNA1509_41082, RNA815_17037}
14.	MligTC455_43967	425	8.85	Mlig455_065490	Neo: - Age: -		0.956	-	-	-	-	-	0.956	Mlig455_065490 {REF} {Length: 2675} {RNA1509_30980} {RNA1310_11778, RNA1509_30980} {RNA1509_30980, RNA815_5468}
15.	MligTC455_49014	544	11.33	Mlig455_006294	Neo: - Age: -	UBL3	0.955	-	-	-	-	0.955	-	Mlig455_006294 {REF} {Length: 2229} {TRANSSPLICED} {Pfam: Ubiquitin-2 like Rad60 SUMO-like [PF13881.8, score=89.0]} {Human: ENSG00000122042, UBL3, ubiquitin like 3, [RH, Score=152, Expect=5e-48]} {Mouse: ENSMUSG00000001687, Ubl3, ubiquitin-like 3, [RH, Score=151, Expect=8e-48]} {Dmel: FBgn0026076, UBL3, Ubiquitin like 3, [Score=141, Expect=2e-41]} {Celegans: WBGene00008121, C46F11.6, Ubiquitin-like protein, [Score=115, Expect=7e-34]} {Smed: dd_Smed_v6_10574_0_1, dd_Smed_v6_10574_0_1, [Score=107, Expect=1e-30]} {RNA1509_29746, RNA1509_45031, RNA1509_49077} {RNA1310_53434, RNA1509_29746, RNA1509_45031, RNA1509_49077} {RNA1509_29746, RNA1509_45031, RNA1509_49077, RNA815_28925}
16.	MligTC455_18417	313	6.52	Mlig455_053948, Mlig455_060585	Neo: - Age: -		0.954	-	-	-	-	-	0.954	Mlig455_053948 {REF} {Length: 594} {NoTransDecoderORF} {RNA1509_52816} {RNA1310_3937} {RNA815_30143} Mlig455_060585 {REF} {Length: 562} {NoTransDecoderORF} {RNA1509_52816} {RNA1310_3937} {RNA815_30143}
17.	MligTC455_21043	200	4.16	Mlig455_005970	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.437		0.954	-	-	-	-	-	0.954	Mlig455_005970 {REF} {Length: 2137} {RNA1509_55141} {RNA1310_17966} {RNA815_4985.1}
18.	MligTC455_18596	239	4.97	Mlig455_025973	Neo: - Age: Down-Up-Up		0.952	-	-	-	-	-	0.952	Mlig455_025973 {REF} {Length: 1665} {RNA1509_42046, RNA1509_50718} {RNA1310_11150, RNA1509_42046} {RNA1509_42046, RNA815_6197}
19.	MligTC455_25199	293	6.11	Mlig455_018714, Mlig455_046011	Neo: - Age: - Region-enriched R8: 3.470/0.01211	DISP1	0.952	-	-	-	-	-	0.952	Mlig455_018714 {REF} {Length: 6113} {Pfam: Patched family [PF02460.20, score=77.9]; Sterol-sensing domain of SREBP cleavage-activation [PF12349.10, score=52.2]; MMPL family [PF03176.17, score=22.8]} {Human: ENSG00000154309, DISP1, dispatched RND transporter family member 1, [RH, Score=239, Expect=7e-64]} {Mouse: ENSMUSG00000030768, Disp1, dispatched RND transporter family member 1, [RH, Score=246, Expect=2e-66]} {Dmel: FBgn0029088, disp, dispatched, [RH, Score=223, Expect=3e-59]} {Celegans: WBGene00000493, che-14, CHE-14 protein, [RH, Score=84.0, Expect=4e-16]} {RNA1509_35130} {RNA1310_3225.1} {RNA815_745} Mlig455_046011 {REF} {Length: 3051} {RNA1509_11398} {RNA1310_877.1} {RNA815_745}
20.	Mlig999005.1						0.95	-	-	-	-	-	0.950
21.	MligTC455_13280	164	3.42	Mlig455_042501	Neo: - Age: Down-Up-Down		0.95	-	-	-	-	-	0.950	Mlig455_042501 {REF} {Length: 3811} {Pfam: Caspase domain [PF00656.24, score=30.2]} {RNA1509_43988} {RNA1310_8586} {RNA815_7730.1}