Data search
Results for MligTC455_53446
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_53446 | 239 | 4.97 | Mlig455_007136 | Neo: - Age: Up-Down-Up |
RSPRY1 | Mlig455_007136 {REF} {Length: 2939} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=43.5]; SPRY domain [PF00622.30, score=40.5]; Prokaryotic RING finger family 4 [PF14447.8, score=28.2]} {Human: ENSG00000159579, RSPRY1, ring finger and SPRY domain containing 1, [Score=180, Expect=1e-48]} {Mouse: ENSMUSG00000050079, Rspry1, ring finger and SPRY domain containing 1, [Score=176, Expect=1e-48]} {Dmel: FBgn0038296, CG6752, [Score=70.9, Expect=2e-12]} {Celegans: WBGene00008876, F16A11.1, [Score=149, Expect=6e-38]} {Smed: dd_Smed_v6_5473_0_1, dd_Smed_v6_5473_0_1, [Score=157, Expect=4e-41]} {RNA1509_33841} {RNA1310_12130} {RNA815_33873} |
Cumulative graph for MligTC455_53446
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.689 | 2.891 | 0.58308 | 1.00000 | |
| RegionR2 | -0.27 | 2.891 | 0.71108 | 1.00000 | |
| RegionR3 | -0.258 | 2.891 | 0.66016 | 1.00000 | |
| RegionR4 | 0.743 | 2.891 | 0.24563 | 0.54395 | |
| RegionR5 | 0.489 | 2.891 | 0.30036 | 0.63574 | |
| RegionR6 | -0.205 | 2.891 | 0.72294 | 1.00000 | |
| RegionR7 | -0.724 | 2.891 | 0.36213 | 0.99764 | |
| RegionR8 | -0.465 | 2.891 | 0.61129 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.13 | 2.891 | 0.18875 | 0.92857 | |
| RegenerationR2 | -0.736 | 2.891 | 0.28531 | 0.72837 | |
| RegenerationR3 | -0.585 | 2.891 | 0.41026 | 0.80895 | |
| RegenerationR4 | -0.481 | 2.891 | 0.48561 | 0.86162 | |
| RegenerationR5 | 0.179 | 2.891 | 0.75202 | 0.97242 | |
| RegenerationR6 | -0.778 | 2.891 | 0.31696 | 0.66435 | |
| RegenerationBL | 0.372 | 2.891 | 0.67850 | 1.00000 | |
| RegenerationTP | 0.408 | 2.891 | 0.66616 | 0.99754 |
Genes with expression patterns similar to MligTC455_53446
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_53446 | 239 | 4.97 | Mlig455_007136 | Neo: - Age: Up-Down-Up |
RSPRY1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_007136 {REF} {Length: 2939} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=43.5]; SPRY domain [PF00622.30, score=40.5]; Prokaryotic RING finger family 4 [PF14447.8, score=28.2]} {Human: ENSG00000159579, RSPRY1, ring finger and SPRY domain containing 1, [Score=180, Expect=1e-48]} {Mouse: ENSMUSG00000050079, Rspry1, ring finger and SPRY domain containing 1, [Score=176, Expect=1e-48]} {Dmel: FBgn0038296, CG6752, [Score=70.9, Expect=2e-12]} {Celegans: WBGene00008876, F16A11.1, [Score=149, Expect=6e-38]} {Smed: dd_Smed_v6_5473_0_1, dd_Smed_v6_5473_0_1, [Score=157, Expect=4e-41]} {RNA1509_33841} {RNA1310_12130} {RNA815_33873} |
| 2. | MligTC455_43952 | 230 | 4.79 | Mlig455_068335 | Neo: Int S/G2/M Age: - |
NEMP1 | 0.976 | - | - | - | - | - | 0.976 | Mlig455_068335 {REF} {Length: 1736} {Pfam: NEMP family [PF10225.11, score=60.7]} {Human: ENSG00000166881, NEMP1, nuclear envelope integral membrane protein 1, [Score=66.6, Expect=1e-12]} {Mouse: ENSMUSG00000043015, Nemp2, nuclear envelope integral membrane protein 2, [Score=55.1, Expect=9e-09]} {RNA1509_42654} {RNA1310_10680} {RNA815_32705} |
| 3. | MligTC455_50382 | 247 | 5.15 | Mlig455_047837 | Neo: Int S/G2/M Age: - |
MCM10 | 0.969 | - | - | - | - | - | 0.969 | Mlig455_047837 {REF} {Length: 3679} {Pfam: Mcm10 replication factor [PF09332.13, score=164.7]; Primase zinc finger [PF09329.13, score=39.6]} {Human: ENSG00000065328, MCM10, minichromosome maintenance 10 replication initiation factor, [RH, Score=206, Expect=1e-54]} {Mouse: ENSMUSG00000026669, Mcm10, minichromosome maintenance 10 replication initiation factor, [RH, Score=201, Expect=3e-53]} {Dmel: FBgn0032929, Mcm10, Minichromosome maintenance 10, [RH, Score=104, Expect=1e-22]} {Celegans: WBGene00012935, mcm-10, Yeast MCM (Licensing factor) related, [RH, Score=75.9, Expect=7e-14]} {Smed: dd_Smed_v6_16334_0_2, dd_Smed_v6_16334_0_2, [RH, Score=100, Expect=6e-23]} {RNA1509_24694, RNA1509_44843, RNA1509_56719} {RNA1310_4470.1, RNA1509_24694, RNA1509_44843, RNA1509_56719} {RNA1509_24694, RNA1509_44843, RNA1509_56719, RNA815_12049} |
| 4. | MligTC455_51827 | 2868 | 59.75 | Mlig455_017594, Mlig455_058811 | Neo: Int S/G2/M Age: Down-Up-Up Region-enriched R5: 1.028/0.00020 |
POLR1C | 0.962 | - | - | - | - | - | 0.962 | Mlig455_017594 {REF} {Length: 4616} {Pfam: RNA polymerase Rpb3/Rpb11 dimerisation domain [PF01193.26, score=74.9]; RNA polymerase Rpb3/RpoA insert domain [PF01000.28, score=44.7]} {Human: ENSG00000171453, POLR1C, RNA polymerase I and III subunit C, [Score=213, Expect=2e-66]} {Mouse: ENSMUSG00000067148, Polr1c, polymerase (RNA) I polypeptide C, [Score=204, Expect=4e-63]} {Dmel: FBgn0031657, CG3756, [Score=197, Expect=8e-61]} {Celegans: WBGene00019275, rpac-40, RNA Polymerase I/III (A/C) shared subunit, [Score=210, Expect=1e-65]} {Smed: dd_Smed_v6_5608_0_5, dd_Smed_v6_5608_0_5, [Score=98.6, Expect=6e-23]} {RNA1509_8571} {RNA1310_29398} {RNA815_14725} Mlig455_058811 {REF} {Length: 1089} {TRANSSPLICED} {Pfam: RNA polymerase Rpb3/Rpb11 dimerisation domain [PF01193.26, score=75.0]; RNA polymerase Rpb3/RpoA insert domain [PF01000.28, score=71.6]} {Human: ENSG00000171453, POLR1C, RNA polymerase I and III subunit C, [RH, Score=257, Expect=1e-83]} {Mouse: ENSMUSG00000067148, Polr1c, polymerase (RNA) I polypeptide C, [RH, Score=248, Expect=2e-80]} {Dmel: FBgn0031657, CG3756, [RH, Score=238, Expect=1e-76]} {Celegans: WBGene00019275, rpac-40, RNA Polymerase I/III (A/C) shared subunit, [RH, Score=250, Expect=3e-81]} {Smed: dd_Smed_v6_5608_0_1, dd_Smed_v6_5608_0_1, [RH, Score=132, Expect=5e-35]} {RNA1509_8571} {RNA1310_29398, RNA1509_8571} {RNA1509_8571, RNA815_14725} |
| 5. | MligTC455_42318 | 752 | 15.66 | Mlig455_019377, Mlig455_059097 | Neo: Neoblast, stringent Age: Down-Up-Up, logFC(26M/2M)=0.587 Region-enriched R5: 1.571/0.00018 |
ZNHIT3 | 0.959 | - | - | - | - | - | 0.959 | Mlig455_019377 {REF} {Length: 1483} {TRANSSPLICED} {tRNA: Ala(CGC),pseudo, score=24.9} {Pfam: HIT zinc finger [PF04438.18, score=21.3]} {Human: ENSG00000278574, ZNHIT3, zinc finger HIT-type containing 3, [RH, Score=77.4, Expect=9e-18]; ENSG00000273611, ZNHIT3, zinc finger HIT-type containing 3, [RH, Score=77.4, Expect=9e-18]} {Mouse: ENSMUSG00000020526, Znhit3, zinc finger, HIT type 3, [RH, Score=74.3, Expect=7e-17]} {Dmel: FBgn0034033, CG8204, [RH, Score=77.4, Expect=3e-18]} {RNA1509_12423} {RNA1310_40751} {RNA815_21136} Mlig455_059097 {REF} {Length: 1484} {TRANSSPLICED} {tRNA: Undet(NNN),pseudo, score=27.6} {Pfam: HIT zinc finger [PF04438.18, score=21.2]} {Human: ENSG00000278574, ZNHIT3, zinc finger HIT-type containing 3, [RH, Score=77.4, Expect=9e-18]; ENSG00000273611, ZNHIT3, zinc finger HIT-type containing 3, [RH, Score=77.4, Expect=9e-18]} {Mouse: ENSMUSG00000020526, Znhit3, zinc finger, HIT type 3, [RH, Score=74.3, Expect=8e-17]} {Dmel: FBgn0034033, CG8204, [RH, Score=76.3, Expect=7e-18]} {RNA1509_12423} {RNA1310_40751} {RNA815_21136} |
| 6. | MligTC455_52190 | 488 | 10.17 | Mlig455_065357 | Neo: Int S/G2/M Age: - |
SMNDC1 | 0.959 | - | - | - | - | - | 0.959 | Mlig455_065357 {REF} {Length: 1981} {Pfam: Survival motor neuron protein (SMN) [PF06003.14, score=39.2]} {Human: ENSG00000119953, SMNDC1, survival motor neuron domain containing 1, [RH, Score=123, Expect=1e-33]} {Mouse: ENSMUSG00000025024, Smndc1, survival motor neuron domain containing 1, [RH, Score=123, Expect=9e-34]} {Dmel: FBgn0039977, CG17454, [RH, Score=110, Expect=7e-29]} {Celegans: WBGene00004891, smr-1, SMN (Survival of Motor Neuron protein) Related, [RH, Score=59.7, Expect=2e-10]} {Smed: dd_Smed_v6_5356_0_1, dd_Smed_v6_5356_0_1, [RH, Score=79.0, Expect=5e-18]} {RNA1509_22547, RNA1509_54494} {RNA1310_19986, RNA1509_22547, RNA1509_54494} {RNA1509_22547, RNA1509_54494, RNA815_8484.1} |
| 7. | MligTC455_03675 | 1379 | 28.72 | Mlig455_050846 | Neo: Int S/G2/M Age: Down-Up-Up Region-enriched R5: 1.490/0.00000 Regeneration-upregulated BL: 1.734 Regeneration-enriched BL: 1.734 |
TSFM | 0.956 | - | - | - | - | - | 0.956 | Mlig455_050846 {REF} {Length: 1275} {TRANSSPLICED} {Pfam: Elongation factor TS [PF00889.21, score=68.9]} {Human: ENSG00000123297, TSFM, Ts translation elongation factor, mitochondrial, [RH, Score=141, Expect=2e-39]} {Mouse: ENSMUSG00000040521, Tsfm, Ts translation elongation factor, mitochondrial, [RH, Score=139, Expect=6e-39]} {Dmel: FBgn0032646, mEFTs, mitochondrial translation elongation factor Ts, [RH, Score=154, Expect=9e-45]} {Celegans: WBGene00010094, tsfm-1, Elongation factor Ts, mitochondrial, [RH, Score=144, Expect=4e-41]} {Smed: dd_Smed_v6_4240_0_1, dd_Smed_v6_4240_0_1, [RH, Score=150, Expect=2e-43]} {RNA1509_10753, RNA1509_39902, RNA1509_52578} {RNA1310_24906.1, RNA1509_10753, RNA1509_39902, RNA1509_52578} {RNA1509_10753, RNA1509_39902, RNA1509_52578, RNA815_11915} |
| 8. | MligTC455_39927 | 462 | 9.62 | Mlig455_003440, Mlig455_030666 | Neo: - Age: - Region-enriched R5: 1.172/0.01173 |
0.953 | - | - | - | - | - | 0.953 | Mlig455_003440 {REF} {Length: 3294} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=22.7]} {RNA1509_51800} {RNA1310_33993} {RNA815_19951} Mlig455_030666 {REF} {Length: 3777} {Pfam: Mitochondrial carrier protein [PF00153.29, score=22.1]} {RNA1509_51800} {RNA1310_33993, RNA1509_51800} {RNA1509_51800, RNA815_19951} |
|
| 9. | MligTC455_47104 | 1250 | 26.05 | Mlig455_037914, Mlig455_038993 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.409/0.00127 |
0.952 | - | - | - | - | - | 0.952 | Mlig455_037914 {REF} {Length: 2292} {TRANSSPLICED} {Pfam: OST-HTH/LOTUS domain [PF12872.9, score=49.7]; Tudor domain [PF00567.26, score=23.5]} {RNA1509_12870} {RNA1310_8358} {RNA815_12194.1} Mlig455_038993 {REF} {Length: 2294} {TRANSSPLICED} {Pfam: OST-HTH/LOTUS domain [PF12872.9, score=50.5]; Tudor domain [PF00567.26, score=21.9]} {RNA1509_12870} {RNA1310_8358, RNA1509_12870} {RNA1509_12870, RNA815_12194.1} |