TomoSeq data search

Data search

Results for MligTC455_53456

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_53456	1138	23.71	Mlig455_000042, Mlig455_063716	Neo: - Age: logFC(26M/2M)=0.221	GMIP	Mlig455_000042 {REF} {Length: 3840} {Pfam: RhoGAP domain [PF00620.29, score=128.0]} {Human: ENSG00000089639, GMIP, GEM interacting protein, [Score=120, Expect=3e-27]} {Mouse: ENSMUSG00000036452, Arhgap26, Rho GTPase activating protein 26, [RH, Score=97.1, Expect=5e-21]} {Dmel: FBgn0030685, Graf, GTPase regulator associated with FAK, [Score=93.6, Expect=4e-19]} {Celegans: WBGene00002040, hum-7, Heavy chain, Unconventional Myosin, [Score=87.8, Expect=2e-17]} {Smed: dd_Smed_v6_5208_0_2, dd_Smed_v6_5208_0_2, [Score=122, Expect=2e-28]} {RNA1509_7184} {RNA1310_1977} {RNA815_11380} Mlig455_063716 {REF} {Length: 4427} {Pfam: RhoGAP domain [PF00620.29, score=127.7]} {Human: ENSG00000089639, GMIP, GEM interacting protein, [Score=118, Expect=2e-26]} {Mouse: ENSMUSG00000036452, Arhgap26, Rho GTPase activating protein 26, [Score=93.6, Expect=4e-19]; ENSMUSG00000036246, Gmip, Gem-interacting protein, [Score=89.4, Expect=1e-17]} {Dmel: FBgn0025836, RhoGAP1A, Rho GTPase activating protein at 1A, [Score=89.7, Expect=8e-18]} {Celegans: WBGene00002040, hum-7, Heavy chain, Unconventional Myosin, [Score=87.4, Expect=3e-17]} {Smed: dd_Smed_v6_5208_0_2, dd_Smed_v6_5208_0_2, [Score=108, Expect=5e-24]} {RNA1509_7184} {RNA1310_1977} {RNA815_11380}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_53456

1138

23.71

Mlig455_000042, Mlig455_063716

Neo: -

Age: logFC(26M/2M)=0.221

GMIP

Mlig455_000042 {REF} {Length: 3840} {Pfam: RhoGAP domain [PF00620.29, score=128.0]} {Human: ENSG00000089639, GMIP, GEM interacting protein, [Score=120, Expect=3e-27]} {Mouse: ENSMUSG00000036452, Arhgap26, Rho GTPase activating protein 26, [RH, Score=97.1, Expect=5e-21]} {Dmel: FBgn0030685, Graf, GTPase regulator associated with FAK, [Score=93.6, Expect=4e-19]} {Celegans: WBGene00002040, hum-7, Heavy chain, Unconventional Myosin, [Score=87.8, Expect=2e-17]} {Smed: dd_Smed_v6_5208_0_2, dd_Smed_v6_5208_0_2, [Score=122, Expect=2e-28]} {RNA1509_7184} {RNA1310_1977} {RNA815_11380}

Mlig455_063716 {REF} {Length: 4427} {Pfam: RhoGAP domain [PF00620.29, score=127.7]} {Human: ENSG00000089639, GMIP, GEM interacting protein, [Score=118, Expect=2e-26]} {Mouse: ENSMUSG00000036452, Arhgap26, Rho GTPase activating protein 26, [Score=93.6, Expect=4e-19]; ENSMUSG00000036246, Gmip, Gem-interacting protein, [Score=89.4, Expect=1e-17]} {Dmel: FBgn0025836, RhoGAP1A, Rho GTPase activating protein at 1A, [Score=89.7, Expect=8e-18]} {Celegans: WBGene00002040, hum-7, Heavy chain, Unconventional Myosin, [Score=87.4, Expect=3e-17]} {Smed: dd_Smed_v6_5208_0_2, dd_Smed_v6_5208_0_2, [Score=108, Expect=5e-24]} {RNA1509_7184} {RNA1310_1977} {RNA815_11380}

Cumulative graph for MligTC455_53456

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.296	4.906	0.27922	0.93041
RegionR2	-0.291	4.906	0.53275	0.90392
RegionR3	-0.498	4.906	0.20399	0.74431
RegionR4	-0.008	4.906	0.99097	1.00000
RegionR5	0.878	4.906	0.00599	0.03974
RegionR6	0.02	4.906	0.95586	1.00000
RegionR7	0.279	4.906	0.51838	1.00000
RegionR8	0.916	4.906	0.06006	0.47813

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-6.777	4.906	0.14355	0.88288
RegenerationR2	0.338	4.906	0.37355	0.79753
RegenerationR3	0.4	4.906	0.34908	0.76994
RegenerationR4	-0.216	4.906	0.61576	0.91927
RegenerationR5	-0.11	4.906	0.77944	0.98185
RegenerationR6	-0.457	4.906	0.27403	0.62353
RegenerationBL	-1.178	4.906	0.01615	0.13453
RegenerationTP	-0.984	4.906	0.04655	0.35670

Genes with expression patterns similar to MligTC455_53456

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_53456	1138	23.71	Mlig455_000042, Mlig455_063716	Neo: - Age: logFC(26M/2M)=0.221	GMIP	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_000042 {REF} {Length: 3840} {Pfam: RhoGAP domain [PF00620.29, score=128.0]} {Human: ENSG00000089639, GMIP, GEM interacting protein, [Score=120, Expect=3e-27]} {Mouse: ENSMUSG00000036452, Arhgap26, Rho GTPase activating protein 26, [RH, Score=97.1, Expect=5e-21]} {Dmel: FBgn0030685, Graf, GTPase regulator associated with FAK, [Score=93.6, Expect=4e-19]} {Celegans: WBGene00002040, hum-7, Heavy chain, Unconventional Myosin, [Score=87.8, Expect=2e-17]} {Smed: dd_Smed_v6_5208_0_2, dd_Smed_v6_5208_0_2, [Score=122, Expect=2e-28]} {RNA1509_7184} {RNA1310_1977} {RNA815_11380} Mlig455_063716 {REF} {Length: 4427} {Pfam: RhoGAP domain [PF00620.29, score=127.7]} {Human: ENSG00000089639, GMIP, GEM interacting protein, [Score=118, Expect=2e-26]} {Mouse: ENSMUSG00000036452, Arhgap26, Rho GTPase activating protein 26, [Score=93.6, Expect=4e-19]; ENSMUSG00000036246, Gmip, Gem-interacting protein, [Score=89.4, Expect=1e-17]} {Dmel: FBgn0025836, RhoGAP1A, Rho GTPase activating protein at 1A, [Score=89.7, Expect=8e-18]} {Celegans: WBGene00002040, hum-7, Heavy chain, Unconventional Myosin, [Score=87.4, Expect=3e-17]} {Smed: dd_Smed_v6_5208_0_2, dd_Smed_v6_5208_0_2, [Score=108, Expect=5e-24]} {RNA1509_7184} {RNA1310_1977} {RNA815_11380}
2.	MligTC455_53455	575	11.97	Mlig455_000007	Neo: - Age: -		5.957	1.000	1.000	0.965	0.996	0.999	0.997	Mlig455_000007 {REF} {Length: 3939} {TRANSSPLICED} {RNA1509_7184} {RNA1310_1977} {RNA815_9439}
3.	MligTC455_42154	1301	27.11	Mlig455_057280, Mlig455_059618	Neo: - Age: logFC(26M/2M)=-0.356 Region-enriched R2: 1.850/0.00451 Region-enriched R3: 1.206/0.02005	EFCAB5	0.954	-	-	-	0.954	-	-	Mlig455_057280 {REF} {Length: 5873} {Pfam: GAF domain [PF01590.28, score=28.1]; EF hand [PF00036.34, score=21.8]; EF-hand domain [PF13405.8, score=20.6]} {Human: ENSG00000176927, EFCAB5, EF-hand calcium binding domain 5, [RH, Score=399, Expect=2e-115]} {Mouse: ENSMUSG00000050944, Efcab5, EF-hand calcium binding domain 5, [RH, Score=367, Expect=8e-105]} {Smed: dd_Smed_v6_8209_0_1, dd_Smed_v6_8209_0_1, [RH, Score=529, Expect=2e-164]} {RNA1509_1330} {RNA1310_1624} {RNA815_449} Mlig455_059618 {REF} {Length: 5232} {TRANSSPLICED} {Pfam: GAF domain [PF01590.28, score=28.2]; EF hand [PF00036.34, score=21.8]; EF-hand domain [PF13405.8, score=20.7]} {Human: ENSG00000176927, EFCAB5, EF-hand calcium binding domain 5, [RH, Score=400, Expect=6e-116]} {Mouse: ENSMUSG00000050944, Efcab5, EF-hand calcium binding domain 5, [RH, Score=368, Expect=2e-105]} {Smed: dd_Smed_v6_8209_0_1, dd_Smed_v6_8209_0_1, [RH, Score=528, Expect=4e-164]} {RNA1509_1330, RNA1509_26864} {RNA1310_1439, RNA1509_26864} {RNA1509_26864, RNA815_449}
4.	MligTC455_40220	745	15.51	Mlig455_015916, Mlig455_059676	Neo: - Age: -	SH3D19	0.953	-	-	-	0.953	-	-	Mlig455_015916 {REF} {Length: 3055} {TRANSSPLICED} {Pfam: SH3 domain [PF00018.30, score=148.5]; Variant SH3 domain [PF14604.8, score=121.2]; Variant SH3 domain [PF07653.19, score=98.2]} {Human: ENSG00000109686, SH3D19, SH3 domain containing 19, [RH, Score=110, Expect=1e-24]} {Mouse: ENSMUSG00000028082, Sh3d19, SH3 domain protein D19, [RH, Score=111, Expect=3e-25]} {Dmel: FBgn0023388, Dap160, Dynamin associated protein 160, [Score=62.4, Expect=9e-10]} {Celegans: WBGene00006405, itsn-1, ITSN (Intersectin) family, [RH, Score=67.0, Expect=2e-11]} {Smed: dd_Smed_v6_3992_0_1, dd_Smed_v6_3992_0_1, [Score=62.0, Expect=8e-10]} {RNA1509_6888} {RNA1310_6388} {RNA815_21405} Mlig455_059676 {REF} {Length: 3156} {TRANSSPLICED} {Pfam: SH3 domain [PF00018.30, score=144.8]; Variant SH3 domain [PF14604.8, score=122.3]; Variant SH3 domain [PF07653.19, score=92.6]} {Human: ENSG00000109686, SH3D19, SH3 domain containing 19, [RH, Score=108, Expect=6e-24]} {Mouse: ENSMUSG00000028082, Sh3d19, SH3 domain protein D19, [RH, Score=110, Expect=8e-25]} {Dmel: FBgn0023388, Dap160, Dynamin associated protein 160, [Score=67.8, Expect=2e-11]} {Celegans: WBGene00006405, itsn-1, ITSN (Intersectin) family, [RH, Score=66.6, Expect=3e-11]} {Smed: dd_Smed_v6_3992_0_1, dd_Smed_v6_3992_0_1, [Score=56.2, Expect=4e-08]} {RNA1509_6888} {RNA1310_6388, RNA1509_6888} {RNA1509_6888, RNA815_21405}