Data search


search
Exact
Search

Results for MligTC455_53478

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_53478 92 1.91 Mlig455_041666

Neo: -

Age: Up-Down-Down

Mlig455_041666 {REF} {Length: 423} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_29761} {RNA1310_57096} {RNA815_16500}

Cumulative graph for MligTC455_53478

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -5.416 1.959 0.32234 0.97205
RegionR2 1.03 1.959 0.54340 0.91027
RegionR3 1.746 1.959 0.09044 0.53117
RegionR4 1.825 1.959 0.13197 0.36844
RegionR5 1.605 1.959 0.09565 0.29632
RegionR6 1.797 1.959 0.09984 0.58034
RegionR7 -1.574 1.959 0.99821 1.00000
RegionR8 -1.014 1.959 0.99257 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.039 1.959 0.99988 1.00000
RegenerationR2 0.083 1.959 0.98805 1.00000
RegenerationR3 -0.06 1.959 0.90076 1.00000
RegenerationR4 0.342 1.959 0.81921 0.99355
RegenerationR5 -0.357 1.959 0.65683 0.93459
RegenerationR6 -0.395 1.959 0.68381 0.91637
RegenerationBL -3.556 1.959 0.17968 0.50874
RegenerationTP 1.762 1.959 0.25247 0.70033


Genes with expression patterns similar to MligTC455_53478

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_53478 92 1.91 Mlig455_041666

Neo: -

Age: Up-Down-Down

4 1.000 1.000 - 1.000 - 1.000 Mlig455_041666 {REF} {Length: 423} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_29761} {RNA1310_57096} {RNA815_16500}
2. MligTC455_20214 58 1.2 Mlig455_042923

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.264

0.98 - - - 0.980 - - Mlig455_042923 {REF} {Length: 1007} {RNA1310_23223} {RNA815_55110}
3. MligTC455_29773 152 3.18 Mlig455_061443

Neo: -

Age: -

MAP3K19 0.976 - - - - - 0.976 Mlig455_061443 {REF} {Length: 2940} {Pfam: Protein kinase domain [PF00069.27, score=185.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=134.9]; Ankyrin repeats (many copies) [PF13637.8, score=51.0]; Ankyrin repeats (3 copies) [PF12796.9, score=33.9]; Fungal protein kinase [PF17667.3, score=26.2]; Ankyrin repeats (many copies) [PF13857.8, score=25.6]; ABC1 atypical kinase-like domain [PF03109.18, score=22.1]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=160, Expect=1e-41]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=163, Expect=2e-42]} {Dmel: FBgn0266465, GckIII, Germinal centre kinase III, [Score=139, Expect=5e-35]} {Celegans: WBGene00001526, gck-1, Germinal center kinase 1, [Score=133, Expect=5e-33]} {Smed: dd_Smed_v6_2030_0_16, dd_Smed_v6_2030_0_16, [Score=137, Expect=2e-35]} {RNA1509_48626} {RNA1310_31580} {RNA815_5323.1}
4. MligTC455_38113 246 5.13 Mlig455_038735, Mlig455_041310, Mlig455_068428

Neo: -

Age: Up-Down-Up

0.97 - - - - - 0.970

Mlig455_038735 {REF} {Length: 11183} {RNA1509_26128, RNA1509_47004} {RNA1310_7005.1, RNA1509_26128, RNA1509_47004} {RNA1509_26128, RNA1509_47004, RNA815_23435}

Mlig455_041310 {REF} {Length: 2248} {NoTransDecoderORF} {RNA1509_58500} {RNA1310_19542.3, RNA1509_58500} {RNA1509_58500, RNA815_58957}

Mlig455_068428 {REF} {Length: 1021} {NoTransDecoderORF} {RNA1509_12775} {RNA1310_27018} {RNA815_50345}
5. MligTC455_21708 36 0.75 Mlig455_015590, Mlig455_055834

Neo: -

Age: -

Region-enriched R4: 4.065/0.02304

0.957 - - - 0.957 - -

Mlig455_015590 {REF} {Length: 587} {RNA1310_60669}

Mlig455_055834 {REF} {Length: 2893} {RNA1509_25664} {RNA1310_27489.1} {RNA815_31395}
6. MligTC455_35223 384 8 Mlig455_019066, Mlig455_064303, Mlig455_064338

Neo: -

Age: Down-Up-Up

Region-enriched R2: 2.984/0.02326

LPIN2, LPIN3 0.956 - - - - - 0.956

Mlig455_019066 {REF} {Length: 1843} {Pfam: LNS2 (Lipin/Ned1/Smp2) [PF08235.15, score=274.9]; lipin, N-terminal conserved region [PF04571.16, score=79.9]} {Human: ENSG00000101577, LPIN2, lipin 2, [Score=240, Expect=2e-69]; ENSG00000132793, LPIN3, lipin 3, [Score=238, Expect=8e-69]} {Mouse: ENSMUSG00000024052, Lpin2, lipin 2, [Score=237, Expect=2e-68]; ENSMUSG00000027412, Lpin3, lipin 3, [Score=236, Expect=1e-68]} {Dmel: FBgn0263593, Lpin, Lipin, [Score=250, Expect=8e-73]} {Celegans: WBGene00010425, lpin-1, LiPIN (Mammalian lipodystrophy associated) homolog, [Score=226, Expect=3e-65]} {Smed: dd_Smed_v6_8002_0_1, dd_Smed_v6_8002_0_1, [Score=239, Expect=1e-70]} {RNA1509_50910} {RNA1310_14125.1} {RNA815_37382}

Mlig455_064303 {REF} {Length: 1843} {Pfam: LNS2 (Lipin/Ned1/Smp2) [PF08235.15, score=274.9]; lipin, N-terminal conserved region [PF04571.16, score=76.0]} {Human: ENSG00000101577, LPIN2, lipin 2, [Score=240, Expect=2e-69]; ENSG00000132793, LPIN3, lipin 3, [Score=238, Expect=7e-69]} {Mouse: ENSMUSG00000024052, Lpin2, lipin 2, [Score=237, Expect=2e-68]; ENSMUSG00000027412, Lpin3, lipin 3, [Score=236, Expect=2e-68]} {Dmel: FBgn0263593, Lpin, Lipin, [Score=250, Expect=7e-73]} {Celegans: WBGene00010425, lpin-1, LiPIN (Mammalian lipodystrophy associated) homolog, [Score=226, Expect=3e-65]} {Smed: dd_Smed_v6_8002_0_1, dd_Smed_v6_8002_0_1, [Score=239, Expect=1e-70]} {RNA1509_50910} {RNA1310_14125.1} {RNA815_37382}

Mlig455_064338 {REF} {Length: 1748} {Pfam: LNS2 (Lipin/Ned1/Smp2) [PF08235.15, score=275.1]; lipin, N-terminal conserved region [PF04571.16, score=78.9]} {Human: ENSG00000132793, LPIN3, lipin 3, [Score=239, Expect=2e-69]; ENSG00000101577, LPIN2, lipin 2, [Score=238, Expect=6e-69]} {Mouse: ENSMUSG00000027412, Lpin3, lipin 3, [Score=238, Expect=2e-69]; ENSMUSG00000024052, Lpin2, lipin 2, [Score=237, Expect=1e-68]} {Dmel: FBgn0263593, Lpin, Lipin, [Score=246, Expect=6e-72]} {Celegans: WBGene00010425, lpin-1, LiPIN (Mammalian lipodystrophy associated) homolog, [Score=225, Expect=2e-65]} {Smed: dd_Smed_v6_8002_0_1, dd_Smed_v6_8002_0_1, [Score=238, Expect=1e-70]} {RNA1509_50910} {RNA1310_14125.1} {RNA815_37382}
7. MligTC455_51957 427 8.9 Mlig455_001616

Neo: -

Age: logFC(26M/2M)=0.792

LCK 0.956 - - - 0.956 - - Mlig455_001616 {REF} {Length: 2834} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=195.1]; Protein kinase domain [PF00069.27, score=130.1]; Variant SH3 domain [PF14604.8, score=43.0]; SH2 domain [PF00017.26, score=42.8]; Variant SH3 domain [PF07653.19, score=36.6]; SH3 domain [PF00018.30, score=35.8]; ABC1 atypical kinase-like domain [PF03109.18, score=28.0]} {Human: ENSG00000182866, LCK, LCK proto-oncogene, Src family tyrosine kinase, [Score=251, Expect=7e-78]; ENSG00000101336, HCK, HCK proto-oncogene, Src family tyrosine kinase, [Score=250, Expect=5e-77]; ENSG00000254087, LYN, LYN proto-oncogene, Src family tyrosine kinase, [Score=241, Expect=1e-73]} {Mouse: ENSMUSG00000000409, Lck, lymphocyte protein tyrosine kinase, [Score=255, Expect=4e-79]; ENSMUSG00000042228, Lyn, LYN proto-oncogene, Src family tyrosine kinase, [Score=243, Expect=7e-75]} {Dmel: FBgn0264959, Src42A, Src oncogene at 42A, [Score=239, Expect=4e-73]} {Celegans: WBGene00005077, src-1, Tyrosine protein-kinase src-1, [Score=213, Expect=5e-64]} {Smed: dd_Smed_v6_3363_0_2, dd_Smed_v6_3363_0_2, [Score=304, Expect=6e-99]} {RNA1509_10615, RNA1509_47356} {RNA1310_9006.1, RNA1509_47356} {RNA1509_47356, RNA815_3005.1}
8. MligTC455_19980 271 5.64 Mlig455_065810

Neo: -

Age: Up-Down-Down

MBOAT2 0.955 - - - - - 0.955 Mlig455_065810 {REF} {Length: 1753} {Pfam: MBOAT, membrane-bound O-acyltransferase family [PF03062.21, score=85.8]} {Human: ENSG00000143797, MBOAT2, membrane bound O-acyltransferase domain containing 2, [Score=216, Expect=1e-63]} {Mouse: ENSMUSG00000020646, Mboat2, membrane bound O-acyltransferase domain containing 2, [Score=237, Expect=6e-72]} {Dmel: FBgn0033476, oys, oysgedart, [Score=273, Expect=1e-83]} {Celegans: WBGene00016934, mboa-3, Lysophospholipid acyltransferase; Membrane Bound O-Acyl transferase, MBOAT, [RH, Score=213, Expect=2e-63]} {Smed: dd_Smed_v6_3131_0_1, dd_Smed_v6_3131_0_1, [RH, Score=360, Expect=7e-120]} {RNA1509_42786} {RNA1310_11781.1} {RNA815_11734}
9. MligTC455_28468 27 0.57 Mlig455_014243

Neo: -

Age: Up-Down-Up

0.952 - - - 0.952 - - Mlig455_014243 {REF} {Length: 5071} {Dmel: FBgn0030052, CG12065, [Score=96.7, Expect=4e-20]} {Celegans: WBGene00019199, H14E04.2, [Score=84.3, Expect=1e-16]} {Smed: dd_Smed_v6_2100_0_2, dd_Smed_v6_2100_0_2, [Score=116, Expect=9e-27]} {RNA1509_30308} {RNA1310_3001} {RNA815_45999}
10. MligTC455_24469 230 4.79 Mlig455_045884

Neo: -

Age: -

ANK1 0.951 - - - - - 0.951 Mlig455_045884 {REF} {Length: 3158} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=127.3]; Ankyrin repeat [PF00023.32, score=67.7]; Ankyrin repeat [PF13606.8, score=55.9]; Ankyrin repeats (many copies) [PF13637.8, score=52.4]; Ankyrin repeats (many copies) [PF13857.8, score=52.3]; Mab-21 protein [PF03281.16, score=20.7]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=114, Expect=3e-25]; ENSG00000154065, ANKRD29, ankyrin repeat domain 29, [Score=114, Expect=2e-27]; ENSG00000151458, ANKRD50, ankyrin repeat domain 50, [Score=111, Expect=2e-24]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=115, Expect=1e-25]; ENSMUSG00000057766, Ankrd29, ankyrin repeat domain 29, [Score=111, Expect=7e-27]} {Dmel: FBgn0031473, CG3104, [Score=131, Expect=2e-33]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=112, Expect=7e-25]} {Smed: dd_Smed_v6_9936_0_1, dd_Smed_v6_9936_0_1, [Score=136, Expect=1e-33]} {RNA1509_27461} {RNA1310_3838.1, RNA1509_27461} {RNA1509_27461, RNA815_988}
11. MligTC455_54110 148 3.08 Mlig455_035263

Neo: -

Age: -

0.951 - - - 0.951 - - Mlig455_035263 {REF} {Length: 3676} {TRANSSPLICED} {RNA1509_36649} {RNA1310_5371} {RNA815_31423}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA