M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_53519

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_53519 456 9.50 Mlig455_025467

Neo: -

Age: -

Region-enriched R8: 2.706/0.02321

 PHLDB2 Mlig455_025467 {REF} {Length: 4198} {Pfam: PH domain [PF00169.31, score=26.8]} {Human: ENSG00000144824, PHLDB2, pleckstrin homology like domain family B member 2, [Score=132, Expect=5e-32]; ENSG00000019144, PHLDB1, pleckstrin homology like domain family B member 1, [Score=132, Expect=8e-32]} {Mouse: ENSMUSG00000033149, Phldb2, pleckstrin homology like domain, family B, member 2, [Score=135, Expect=3e-33]; ENSMUSG00000048537, Phldb1, pleckstrin homology like domain, family B, member 1, [Score=130, Expect=3e-31]} {Dmel: FBgn0260748, CG5004, [Score=102, Expect=2e-22]} {Smed: dd_Smed_v6_7833_0_1, dd_Smed_v6_7833_0_1, [RH, Score=99.4, Expect=2e-22]} {RNA1509_30588} {RNA1310_7930, RNA1509_30588} {RNA1509_30588, RNA815_13468}

Cumulative graph for MligTC455_53519

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -5.608 3.629 0.17990 0.80842
RegionR2 -0.279 3.629 0.92265 1.00000
RegionR3 0.516 3.629 0.54859 1.00000
RegionR4 0.928 3.629 0.28440 0.59349
RegionR5 0.353 3.629 0.66555 1.00000
RegionR6 -0.164 3.629 0.89742 1.00000
RegionR7 1.547 3.629 0.05229 0.44004
RegionR8 2.706 3.629 0.00039 0.02321

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 5.695 3.629 0.21120 0.95060
RegenerationR2 0.242 3.629 0.59054 0.91143
RegenerationR3 0.179 3.629 0.71182 0.95199
RegenerationR4 0.473 3.629 0.33819 0.77039
RegenerationR5 0.402 3.629 0.35916 0.77089
RegenerationR6 0.902 3.629 0.07869 0.35044
RegenerationBL -1.446 3.629 0.02242 0.16366
RegenerationTP -1.224 3.629 0.03396 0.30730


Genes with expression patterns similar to MligTC455_53519

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_53519 456 9.5 Mlig455_025467

Neo: -

Age: -

Region-enriched R8: 2.706/0.02321

 PHLDB2 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_025467 {REF} {Length: 4198} {Pfam: PH domain [PF00169.31, score=26.8]} {Human: ENSG00000144824, PHLDB2, pleckstrin homology like domain family B member 2, [Score=132, Expect=5e-32]; ENSG00000019144, PHLDB1, pleckstrin homology like domain family B member 1, [Score=132, Expect=8e-32]} {Mouse: ENSMUSG00000033149, Phldb2, pleckstrin homology like domain, family B, member 2, [Score=135, Expect=3e-33]; ENSMUSG00000048537, Phldb1, pleckstrin homology like domain, family B, member 1, [Score=130, Expect=3e-31]} {Dmel: FBgn0260748, CG5004, [Score=102, Expect=2e-22]} {Smed: dd_Smed_v6_7833_0_1, dd_Smed_v6_7833_0_1, [RH, Score=99.4, Expect=2e-22]} {RNA1509_30588} {RNA1310_7930, RNA1509_30588} {RNA1509_30588, RNA815_13468}
2. MligTC455_27557 429 8.93 Mlig455_022499

Neo: -

Age: -

 2.463 - 0.738 - 0.983 0.742 - Mlig455_022499 {REF} {Length: 2413} {RNA1509_15552} {RNA1310_15792} {RNA815_5911}
3. MligTC455_16022 616 12.83 Mlig455_048556

Neo: -

Age: Down-Up-Down

Region-enriched R4: 1.801/0.00244
Region-enriched R3: 1.214/0.03772

 SLC10A3 1.764 - - - 0.954 - 0.810 Mlig455_048556 {REF} {Length: 1530} {Pfam: Sodium Bile acid symporter family [PF01758.18, score=56.7]} {Human: ENSG00000126903, SLC10A3, solute carrier family 10 member 3, [Score=95.5, Expect=6e-21]; ENSG00000100652, SLC10A1, solute carrier family 10 member 1, [Score=92.0, Expect=5e-20]} {Mouse: ENSMUSG00000023073, Slc10a2, solute carrier family 10, member 2, [Score=98.2, Expect=2e-22]} {Dmel: FBgn0030638, CG11655, [Score=141, Expect=2e-37]} {Celegans: WBGene00044650, Y71G10AR.4, [Score=161, Expect=2e-44]} {Smed: dd_Smed_v6_10199_0_1, dd_Smed_v6_10199_0_1, [Score=161, Expect=5e-45]} {RNA1509_13359} {RNA1310_13071} {RNA815_4905}
4. MligTC455_41428 1100 22.92 Mlig455_028046

Neo: -

Age: -

Region-enriched R5: 1.695/0.00005

 1.737 - - - 0.951 - 0.786 Mlig455_028046 {REF} {Length: 1663} {Pfam: Galactoside-binding lectin [PF00337.24, score=77.5]} {Mouse: ENSMUSG00000050335, Lgals3, lectin, galactose binding, soluble 3, [RH, Score=51.6, Expect=6e-07]; ENSMUSG00000053522, Lgals7, lectin, galactose binding, soluble 7, [RH, Score=49.3, Expect=6e-07]} {Dmel: FBgn0031214, CG11374, [RH, Score=70.1, Expect=7e-13]} {Celegans: WBGene00002265, lec-2, Galectin, [RH, Score=68.2, Expect=9e-13]} {RNA1509_56269} {RNA1310_22513} {RNA815_11359}
5. MligTC455_52451 1458 30.38 Mlig455_000136

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.272

Region-enriched R4: 1.299/0.04830

 1.727 - - - 0.956 - 0.771 Mlig455_000136 {REF} {Length: 2129} {Pfam: Pacifastin inhibitor (LCMII) [PF05375.15, score=71.0]} {RNA1509_1907, RNA1509_6719} {RNA1310_12956, RNA1509_1907, RNA1509_6719} {RNA1509_1907, RNA1509_6719, RNA815_4763}
6. MligTC455_45335 1483 30.89 Mlig455_048638, Mlig455_068862

Neo: -

Age: Up-Down-Up

 D2HGDH 1.696 - - - 0.965 - 0.731

Mlig455_048638 {REF} {Length: 2059} {Pfam: FAD linked oxidases, C-terminal domain [PF02913.21, score=137.0]; FAD binding domain [PF01565.25, score=126.8]} {Human: ENSG00000180902, D2HGDH, D-2-hydroxyglutarate dehydrogenase, [Score=405, Expect=4e-136]} {Mouse: ENSMUSG00000073609, D2hgdh, D-2-hydroxyglutarate dehydrogenase, [Score=411, Expect=3e-138]} {Dmel: FBgn0023507, D2hgdh, D-2-hydroxyglutaric acid dehydrogenase, [Score=371, Expect=1e-122]} {Celegans: WBGene00010055, F54D5.12, [Score=318, Expect=9e-103]} {Smed: dd_Smed_v6_6440_0_1, dd_Smed_v6_6440_0_1, [Score=413, Expect=1e-139]} {RNA1509_50905} {RNA1310_17895.1} {RNA815_10343.1}

Mlig455_068862 {REF} {Length: 1918} {TRANSSPLICED} {Pfam: FAD linked oxidases, C-terminal domain [PF02913.21, score=136.4]; FAD binding domain [PF01565.25, score=126.8]} {Human: ENSG00000180902, D2HGDH, D-2-hydroxyglutarate dehydrogenase, [Score=406, Expect=3e-136]} {Mouse: ENSMUSG00000073609, D2hgdh, D-2-hydroxyglutarate dehydrogenase, [Score=411, Expect=3e-138]} {Dmel: FBgn0023507, D2hgdh, D-2-hydroxyglutaric acid dehydrogenase, [Score=370, Expect=1e-122]} {Celegans: WBGene00010055, F54D5.12, [Score=318, Expect=8e-103]} {Smed: dd_Smed_v6_6440_0_1, dd_Smed_v6_6440_0_1, [Score=413, Expect=1e-139]} {RNA1509_50905} {RNA1310_17895.1} {RNA815_10343.1}
7. MligTC455_48227 540 11.25 Mlig455_068078

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=2.423

Region-enriched R4: 2.853/0.00197

 1.687 - - - 0.977 - 0.710 Mlig455_068078 {REF} {Length: 1529} {Celegans: WBGene00014141, ZK899.2, [Score=48.5, Expect=2e-06]} {Smed: dd_Smed_v6_3689_0_1, dd_Smed_v6_3689_0_1, [Score=154, Expect=2e-44]} {RNA1509_42065} {RNA1310_19256} {RNA815_4158}
8. MligTC455_48226 475 9.89 Mlig455_006039

Neo: -

Age: logFC(26M/2M)=0.772

Region-enriched R4: 2.063/0.02194
Region-enriched R3: 1.959/0.00629

 1.665 - - - 0.956 - 0.709 Mlig455_006039 {REF} {Length: 3886} {Celegans: WBGene00014141, ZK899.2, [RH, Score=145, Expect=5e-39]} {Smed: dd_Smed_v6_3689_0_1, dd_Smed_v6_3689_0_1, [RH, Score=360, Expect=2e-122]} {RNA1509_34003, RNA1509_40119, RNA1509_42065} {RNA1310_14532, RNA1509_34003, RNA1509_40119, RNA1509_42065} {RNA1509_34003, RNA1509_40119, RNA1509_42065, RNA815_4158}
9. MligTC455_36347 2542 52.97 Mlig455_027675

Neo: -

Age: -

 ACP7 0.98 - - - 0.980 - - Mlig455_027675 {REF} {Length: 2194} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=89.6]; Iron/zinc purple acid phosphatase-like protein C [PF14008.8, score=79.5]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=75.2]; PhoD-like phosphatase [PF09423.12, score=19.2]} {Human: ENSG00000183760, ACP7, acid phosphatase 7, tartrate resistant (putative), [RH, Score=431, Expect=2e-148]} {Mouse: ENSMUSG00000037469, Acp7, acid phosphatase 7, tartrate resistant, [RH, Score=448, Expect=1e-154]} {Dmel: FBgn0030245, CG1637, [RH, Score=434, Expect=9e-150]} {Celegans: WBGene00219316, F21A3.11, Purple acid phosphatase, [RH, Score=406, Expect=2e-138]} {Smed: dd_Smed_v6_1053_0_1, dd_Smed_v6_1053_0_1, [RH, Score=537, Expect=0.0]} {RNA1509_2158} {RNA1310_12511.1, RNA1509_2158} {RNA1509_2158, RNA815_6230.1}
10. MligTC455_19214 797 16.61 Mlig455_067480, Mlig455_067488

Neo: -

Age: logFC(26M/2M)=0.411

Region-enriched R4: 2.048/0.00458

 HSD11B1 0.967 - - - 0.967 - -

Mlig455_067480 {REF} {Length: 1095} {Pfam: short chain dehydrogenase [PF00106.27, score=63.8]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=42.8]} {Human: ENSG00000117594, HSD11B1, hydroxysteroid 11-beta dehydrogenase 1, [Score=83.6, Expect=1e-18]} {Mouse: ENSMUSG00000029311, Hsd17b11, hydroxysteroid (17-beta) dehydrogenase 11, [Score=59.7, Expect=2e-10]} {Dmel: FBgn0039043, CG17121, [Score=49.7, Expect=7e-07]} {RNA1509_28182} {RNA1310_27439} {RNA815_13316}

Mlig455_067488 {REF} {Length: 1390} {Pfam: short chain dehydrogenase [PF00106.27, score=128.2]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=83.0]; KR domain [PF08659.12, score=25.0]; Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain [PF02882.21, score=18.0]} {Human: ENSG00000117594, HSD11B1, hydroxysteroid 11-beta dehydrogenase 1, [RH, Score=158, Expect=4e-46]} {Mouse: ENSMUSG00000016194, Hsd11b1, hydroxysteroid 11-beta dehydrogenase 1, [RH, Score=151, Expect=1e-43]} {Dmel: FBgn0051548, CG31548, [Score=80.9, Expect=2e-17]} {Celegans: WBGene00019885, R05D8.7, [Score=80.1, Expect=3e-17]} {Smed: dd_Smed_v6_3167_0_1, dd_Smed_v6_3167_0_1, [Score=71.6, Expect=2e-14]} {RNA1509_28182, RNA1509_29712, RNA1509_41682} {RNA1310_27439, RNA1509_28182, RNA1509_29712, RNA1509_41682} {RNA1509_28182, RNA1509_29712, RNA1509_41682, RNA815_13316}
11. MligTC455_27538 240 5 Mlig455_044414

Neo: -

Age: Down-Down-Up

 ANKRD44 0.966 - 0.966 - - - - Mlig455_044414 {REF} {Length: 5350} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=303.0]; Ankyrin repeats (many copies) [PF13637.8, score=217.4]; Ankyrin repeat [PF13606.8, score=159.3]; Ankyrin repeats (many copies) [PF13857.8, score=140.9]; Ankyrin repeat [PF00023.32, score=99.1]} {Human: ENSG00000065413, ANKRD44, ankyrin repeat domain 44, [Score=130, Expect=9e-30]} {Mouse: ENSMUSG00000052331, Ankrd44, ankyrin repeat domain 44, [Score=123, Expect=6e-28]} {Dmel: FBgn0016920, nompC, no mechanoreceptor potential C, [Score=107, Expect=4e-23]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=101, Expect=3e-21]} {Smed: dd_Smed_v6_13721_0_1, dd_Smed_v6_13721_0_1, [Score=131, Expect=2e-30]} {RNA1509_28032} {RNA1310_2236} {RNA815_18620}
12. MligTC455_20134 584 12.17 Mlig455_039542

Neo: -

Age: Down-Down-Up

 ATP1B2 0.965 - - - 0.965 - - Mlig455_039542 {REF} {Length: 1390} {Pfam: Sodium / potassium ATPase beta chain [PF00287.20, score=192.1]} {Human: ENSG00000129244, ATP1B2, ATPase Na+/K+ transporting subunit beta 2, [Score=101, Expect=5e-24]; ENSG00000101892, ATP1B4, ATPase Na+/K+ transporting family member beta 4, [Score=96.7, Expect=6e-22]} {Mouse: ENSMUSG00000041329, Atp1b2, ATPase, Na+/K+ transporting, beta 2 polypeptide, [Score=101, Expect=4e-24]; ENSMUSG00000032412, Atp1b3, ATPase, Na+/K+ transporting, beta 3 polypeptide, [Score=96.7, Expect=1e-22]} {Dmel: FBgn0015777, nrv2, nervana 2, [Score=145, Expect=2e-40]} {Celegans: WBGene00007646, nkb-1, Sodium/potassium-transporting ATPase subunit beta-1, [Score=151, Expect=1e-42]} {Smed: dd_Smed_v6_2230_0_4, dd_Smed_v6_2230_0_4, [RH, Score=213, Expect=7e-67]} {RNA1509_2976, RNA1509_59487} {RNA1310_26809, RNA1509_2976, RNA1509_59487} {RNA1509_2976, RNA1509_59487, RNA815_11848}
13. MligTC455_53742 73 1.51 Mlig455_057335

Neo: -

Age: Up-Down-Down

 0.965 - - - 0.965 - - Mlig455_057335 {REF} {Length: 4857} {Mouse: ENSMUSG00000051747, Ttn, titin, [Score=53.5, Expect=2e-06]} {RNA1310_20219} {RNA815_12949}
14. MligTC455_35989 290 6.04 Mlig455_062158, Mlig455_062190

Neo: -

Age: -

 0.964 - - - - - 0.964

Mlig455_062158 {REF} {Length: 3771} {Pfam: Germinal center-associated lymphoma [PF15666.7, score=35.6]} {RNA1509_53562} {RNA1310_4221.1, RNA1509_53562} {RNA1509_53562, RNA815_27957}

Mlig455_062190 {REF} {Length: 3908} {RNA1509_53562} {RNA1310_4221.1} {RNA815_28681}
15. MligTC455_36228 588 12.25 Mlig455_028918

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=1.158

 0.964 - - - 0.964 - - Mlig455_028918 {REF} {Length: 20820} {Pfam: Domain of unknown function (DUF4384) [PF14326.8, score=19.6]} {RNA1509_5854} {RNA1310_268.1} {RNA815_437}
16. MligTC455_37843 1027 21.4 Mlig455_036229

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.713

Region-enriched R4: 2.635/0.00618
Region-enriched R5: 2.090/0.01009

 0.964 - - - 0.964 - - Mlig455_036229 {REF} {Length: 3170} {RNA1509_37071} {RNA1310_75243} {RNA815_10582}
17. MligTC455_27556 557 11.6 Mlig455_020263

Neo: -

Age: Down-Down-Up

Region-enriched R3: 2.024/0.00741

 0.962 - - - 0.962 - - Mlig455_020263 {REF} {Length: 2267} {RNA1509_15552} {RNA1310_15792, RNA1509_15552} {RNA1509_15552, RNA815_5911}
18. MligTC455_16764 364 7.57 Mlig455_005718, Mlig455_059498

Neo: -

Age: logFC(26M/2M)=0.526

Region-enriched R4: 2.535/0.04619

 TRHR 0.96 - - - 0.960 - -

Mlig455_005718 {REF} {Length: 1648} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=56.8]} {Human: ENSG00000174417, TRHR, thyrotropin releasing hormone receptor, [Score=53.1, Expect=3e-07]} {Mouse: ENSMUSG00000038760, Trhr, thyrotropin releasing hormone receptor, [Score=53.9, Expect=1e-07]; ENSMUSG00000039079, Trhr2, thyrotropin releasing hormone receptor 2, [Score=52.0, Expect=7e-07]} {Dmel: FBgn0035385, FMRFaR, FMRFamide Receptor, [Score=73.2, Expect=8e-14]} {Celegans: WBGene00016246, daf-37, G-protein coupled receptor daf-37, [Score=53.1, Expect=2e-07]} {Smed: dd_Smed_v6_25364_0_1, dd_Smed_v6_25364_0_1, [Score=197, Expect=1e-59]} {RNA1509_11108} {RNA1310_22159} {RNA815_10331}

Mlig455_059498 {REF} {Length: 2130} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=59.8]} {Human: ENSG00000174417, TRHR, thyrotropin releasing hormone receptor, [Score=54.7, Expect=1e-07]} {Mouse: ENSMUSG00000038760, Trhr, thyrotropin releasing hormone receptor, [Score=55.5, Expect=4e-08]; ENSMUSG00000039079, Trhr2, thyrotropin releasing hormone receptor 2, [Score=53.1, Expect=2e-07]} {Dmel: FBgn0035385, FMRFaR, FMRFamide Receptor, [Score=72.8, Expect=1e-13]} {Celegans: WBGene00016246, daf-37, G-protein coupled receptor daf-37, [Score=54.3, Expect=8e-08]} {Smed: dd_Smed_v6_25364_0_1, dd_Smed_v6_25364_0_1, [RH, Score=198, Expect=6e-60]} {RNA1310_22159} {RNA815_10331}
19. MligTC455_22336 60 1.24 Mlig455_044002, Mlig455_064926

Neo: -

Age: -

Region-enriched R4: 4.339/0.00901

 0.959 - - - 0.959 - -

Mlig455_044002 {REF} {Length: 211} {NoTransDecoderORF} {RNA1509_23617} {RNA1310_25392} {RNA815_17640.1}

Mlig455_064926 {REF} {Length: 420} {NoTransDecoderORF} {RNA1509_23617} {RNA1310_67480} {RNA815_17640.1}
20. MligTC455_52488 21116 439.92 Mlig455_057029, Mlig455_057037

Neo: -

Age: -

Region-enriched R4: 1.108/0.00012

 ETFA 0.958 - - - 0.958 - -

Mlig455_057029 {REF} {Length: 1830} {Pfam: Electron transfer flavoprotein domain [PF01012.23, score=148.8]; Electron transfer flavoprotein FAD-binding domain [PF00766.21, score=123.0]} {Human: ENSG00000140374, ETFA, electron transfer flavoprotein subunit alpha, [RH, Score=424, Expect=4e-149]} {Mouse: ENSMUSG00000032314, Etfa, electron transferring flavoprotein, alpha polypeptide, [RH, Score=416, Expect=5e-146]} {Dmel: FBgn0010516, wal, walrus, [RH, Score=427, Expect=1e-150]} {Celegans: WBGene00009187, F27D4.1, Probable electron transfer flavoprotein subunit alpha, mitochondrial, [RH, Score=403, Expect=3e-141]} {Smed: dd_Smed_v6_1889_0_1, dd_Smed_v6_1889_0_1, [RH, Score=252, Expect=2e-84]} {RNA1509_1744, RNA1509_2729, RNA1509_5582} {RNA1310_19484, RNA1509_1744, RNA1509_2729, RNA1509_5582} {RNA1509_1744, RNA1509_2729, RNA1509_5582, RNA815_9233.1}

Mlig455_057037 {REF} {Length: 1496} {Pfam: Electron transfer flavoprotein domain [PF01012.23, score=148.8]; Electron transfer flavoprotein FAD-binding domain [PF00766.21, score=123.0]} {Human: ENSG00000140374, ETFA, electron transfer flavoprotein subunit alpha, [RH, Score=424, Expect=4e-149]} {Mouse: ENSMUSG00000032314, Etfa, electron transferring flavoprotein, alpha polypeptide, [RH, Score=416, Expect=5e-146]} {Dmel: FBgn0010516, wal, walrus, [RH, Score=427, Expect=1e-150]} {Celegans: WBGene00009187, F27D4.1, Probable electron transfer flavoprotein subunit alpha, mitochondrial, [RH, Score=403, Expect=3e-141]} {Smed: dd_Smed_v6_1889_0_1, dd_Smed_v6_1889_0_1, [RH, Score=252, Expect=2e-84]} {RNA1509_3718, RNA1509_44902} {RNA1310_19484, RNA1509_3718, RNA1509_44902} {RNA1509_3718, RNA1509_44902, RNA815_9233.1}
21. MligTC455_10390 6343 132.15 Mlig455_020021

Neo: Int S/G2/M

Age: Down-Down-Up

 RPS2 0.956 - - - 0.956 - - Mlig455_020021 {REF} {Length: 1068} {TRANSSPLICED} {Pfam: Ribosomal protein S5, N-terminal domain [PF00333.22, score=93.7]; Ribosomal protein S5, C-terminal domain [PF03719.17, score=76.2]} {Human: ENSG00000140988, RPS2, ribosomal protein S2, [RH, Score=362, Expect=2e-126]} {Mouse: ENSMUSG00000044533, Rps2, ribosomal protein S2, [RH, Score=361, Expect=4e-126]; ENSMUSG00000068604, Gm8225, predicted gene 8225, [RH, Score=345, Expect=7e-120]} {Dmel: FBgn0004867, RpS2, Ribosomal protein S2, [RH, Score=333, Expect=1e-115]} {Celegans: WBGene00004471, rps-2, 40S ribosomal protein S2, [RH, Score=330, Expect=2e-114]} {Smed: dd_Smed_v6_226_0_1, dd_Smed_v6_226_0_1, [RH, Score=330, Expect=6e-115]} {RNA1509_18491, RNA1509_26422, RNA1509_29469, RNA1509_29703, RNA1509_29823, RNA1509_54538, RNA1509_6808} {RNA1310_33196.1, RNA1509_18491, RNA1509_26422, RNA1509_29469, RNA1509_29703, RNA1509_29823, RNA1509_54538, RNA1509_6808} {RNA1509_18491, RNA1509_26422, RNA1509_29469, RNA1509_29703, RNA1509_29823, RNA1509_54538, RNA1509_6808, RNA815_15252}
22. MligTC455_51322 354 7.37 Mlig455_009426

Neo: -

Age: Up-Down-Down

 0.955 - 0.955 - - - - Mlig455_009426 {REF} {Length: 2420} {TRANSSPLICED} {RNA1310_11295.1} {RNA815_14627}
23. MligTC455_09032 2197 45.76 Mlig455_008555, Mlig455_018198

Neo: Int S/G2/M

Age: Down-Up-Up

 DPH2 0.954 - - - 0.954 - -

Mlig455_008555 {REF} {Length: 1773} {TRANSSPLICED} {Pfam: Putative diphthamide synthesis protein [PF01866.19, score=116.7]} {Human: ENSG00000132768, DPH2, DPH2 homolog, [RH, Score=114, Expect=9e-27]} {Mouse: ENSMUSG00000028540, Dph2, DPH2 homolog, [RH, Score=124, Expect=3e-30]} {Dmel: FBgn0038272, CG7265, [RH, Score=117, Expect=4e-28]} {Celegans: WBGene00007488, dph-2, 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2, [RH, Score=128, Expect=6e-32]} {Smed: dd_Smed_v6_9681_0_1, dd_Smed_v6_9681_0_1, [RH, Score=115, Expect=1e-27]} {RNA1509_11038} {RNA1310_14290, RNA1509_11038} {RNA1509_11038, RNA815_6505}

Mlig455_018198 {REF} {Length: 1773} {TRANSSPLICED} {Pfam: Putative diphthamide synthesis protein [PF01866.19, score=120.5]} {Human: ENSG00000132768, DPH2, DPH2 homolog, [RH, Score=109, Expect=4e-25]} {Mouse: ENSMUSG00000028540, Dph2, DPH2 homolog, [RH, Score=120, Expect=6e-29]} {Dmel: FBgn0038272, CG7265, [RH, Score=117, Expect=6e-28]} {Celegans: WBGene00007488, dph-2, 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2, [RH, Score=129, Expect=3e-32]} {Smed: dd_Smed_v6_9681_0_1, dd_Smed_v6_9681_0_1, [RH, Score=110, Expect=7e-26]} {RNA1509_11038} {RNA1310_14290} {RNA815_6505}
24. MligTC455_16033 137 2.85 Mlig455_046262

Neo: -

Age: -

 CASP7 0.953 0.953 - - - - - Mlig455_046262 {REF} {Length: 5060} {Pfam: Caspase domain [PF00656.24, score=75.1]} {Human: ENSG00000165806, CASP7, caspase 7, [Score=91.7, Expect=3e-19]} {Mouse: ENSMUSG00000025076, Casp7, caspase 7, [Score=88.6, Expect=1e-18]} {Dmel: FBgn0019972, Drice, Death related ICE-like caspase, [Score=67.4, Expect=2e-11]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=85.1, Expect=8e-18]} {Smed: dd_Smed_v6_1167_0_1, dd_Smed_v6_1167_0_1, [Score=95.5, Expect=1e-21]} {RNA1509_31265, RNA1509_47042} {RNA1310_6014.1, RNA1509_31265} {RNA1509_31265, RNA815_12585.1}
25. MligTC455_31336 134 2.79 Mlig455_008181, Mlig455_008225

Neo: -

Age: Up-Down-Up

Region-enriched R4: 3.692/0.00727
Region-enriched R3: 3.159/0.03019

Regeneration-upregulated R6: 3.625

Regeneration-enriched R6: 3.625

 NYNRIN, PTPRC 0.953 - - - 0.953 - -

Mlig455_008181 {REF} {Length: 5262} {Pfam: Protein-tyrosine phosphatase [PF00102.29, score=132.5]; Integrase zinc binding domain [PF17921.3, score=58.7]; Integrase core domain [PF00665.28, score=45.5]; Low-density lipoprotein receptor domain class A [PF00057.20, score=22.8]} {Human: ENSG00000081237, PTPRC, protein tyrosine phosphatase, receptor type C, [Score=113, Expect=2e-24]; ENSG00000132670, PTPRA, protein tyrosine phosphatase, receptor type A, [Score=108, Expect=5e-23]} {Mouse: ENSMUSG00000026395, Ptprc, protein tyrosine phosphatase, receptor type, C, [Score=110, Expect=9e-24]; ENSMUSG00000068748, Ptprz1, protein tyrosine phosphatase, receptor type Z, polypeptide 1, [Score=107, Expect=1e-22]; ENSMUSG00000027303, Ptpra, protein tyrosine phosphatase, receptor type, A, [Score=106, Expect=9e-23]} {Dmel: FBgn0014007, Ptp69D, Protein tyrosine phosphatase 69D, [Score=98.6, Expect=4e-20]} {Celegans: WBGene00000548, clr-1, Receptor-type tyrosine-protein phosphatase, [Score=96.3, Expect=1e-19]} {Smed: dd_Smed_v6_13361_0_1, dd_Smed_v6_13361_0_1, [RH, Score=122, Expect=1e-27]} {RNA1509_12551} {RNA1310_1005.1} {RNA815_895.1}

Mlig455_008225 {REF} {Length: 1385} {Pfam: Integrase zinc binding domain [PF17921.3, score=60.9]; Integrase core domain [PF00665.28, score=47.8]; Integrase core domain [PF13683.8, score=20.0]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=89.4, Expect=3e-18]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=94.4, Expect=6e-20]} {Smed: dd_Smed_v6_45837_0_1, dd_Smed_v6_45837_0_1, [RH, Score=67.8, Expect=3e-14]} {RNA1509_18367} {RNA1310_1117.1} {RNA815_895.1}
26. MligTC455_41048 764 15.92 Mlig455_045087

Neo: -

Age: logFC(26M/2M)=-0.302

 TBX2 0.952 0.952 - - - - - Mlig455_045087 {REF} {Length: 2264} {Pfam: T-box [PF00907.24, score=261.7]} {Human: ENSG00000121068, TBX2, T-box 2, [Score=321, Expect=3e-101]; ENSG00000135111, TBX3, T-box 3, [Score=317, Expect=3e-99]} {Mouse: ENSMUSG00000018604, Tbx3, T-box 3, [Score=325, Expect=7e-103]; ENSMUSG00000000093, Tbx2, T-box 2, [Score=320, Expect=6e-101]} {Dmel: FBgn0000179, bi, bifid, [Score=320, Expect=8e-99]} {Celegans: WBGene00006543, tbx-2, T-box protein 2, [Score=288, Expect=2e-92]} {Smed: dd_Smed_v6_11693_0_1, dd_Smed_v6_11693_0_1, [Score=322, Expect=8e-103]} {RNA1509_19743, RNA1509_48603} {RNA1310_24036, RNA1509_19743, RNA1509_48603} {RNA1509_19743, RNA1509_48603, RNA815_18470}
27. MligTC455_15684 119 2.47 Mlig455_011251

Neo: -

Age: Up-Down-Up

 SNED1 0.951 - 0.951 - - - - Mlig455_011251 {REF} {Length: 1934} {Pfam: EGF-like domain [PF00008.29, score=24.9]} {Human: ENSG00000162804, SNED1, sushi, nidogen and EGF like domains 1, [Score=54.7, Expect=3e-08]; ENSG00000148400, NOTCH1, notch 1, [Score=53.5, Expect=9e-08]; ENSG00000165124, SVEP1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=52.4, Expect=2e-07]} {Mouse: ENSMUSG00000047793, Sned1, sushi, nidogen and EGF-like domains 1, [Score=55.1, Expect=1e-08]; ENSMUSG00000038146, Notch3, notch 3, [Score=52.8, Expect=9e-08]} {RNA1509_48141} {RNA1310_40191} {RNA815_46710}
28. MligTC455_48070 1559 32.49 Mlig455_019661

Neo: -

Age: logFC(26M/2M)=-0.328

Region-enriched R3: 1.615/0.01457

 HSD11B1 0.951 - - - 0.951 - - Mlig455_019661 {REF} {Length: 1828} {Pfam: short chain dehydrogenase [PF00106.27, score=125.5]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=75.3]; KR domain [PF08659.12, score=27.1]} {Human: ENSG00000117594, HSD11B1, hydroxysteroid 11-beta dehydrogenase 1, [Score=157, Expect=2e-45]} {Mouse: ENSMUSG00000016194, Hsd11b1, hydroxysteroid 11-beta dehydrogenase 1, [RH, Score=154, Expect=1e-44]} {Dmel: FBgn0027583, CG7601, [Score=82.0, Expect=1e-17]} {Celegans: WBGene00014093, ZK829.1, [Score=74.3, Expect=4e-15]} {Smed: dd_Smed_v6_3167_0_1, dd_Smed_v6_3167_0_1, [Score=62.8, Expect=2e-11]} {RNA1509_11335, RNA1509_15148} {RNA1310_26648, RNA1509_11335, RNA1509_15148} {RNA1509_11335, RNA1509_15148, RNA815_11342}
29. MligTC455_53915 113 2.36 Mlig455_018452

Neo: -

Age: -

 0.951 - 0.951 - - - - Mlig455_018452 {REF} {Length: 3976} {TRANSSPLICED} {Pfam: Cadherin-like beta sandwich domain [PF12733.9, score=98.5]; TPR repeat [PF13414.8, score=29.6]; Tetratricopeptide repeat [PF07719.19, score=24.7]; Tetratricopeptide repeat [PF13428.8, score=23.1]; Tetratricopeptide repeat [PF13424.8, score=22.6]; Tetratricopeptide repeat [PF14559.8, score=22.0]} {Smed: dd_Smed_v6_13836_0_1, dd_Smed_v6_13836_0_1, [RH, Score=277, Expect=2e-77]} {RNA1509_15096} {RNA1310_1559.1} {RNA815_7116}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA