Data search
Results for MligTC455_53525
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_53525 | 3934 | 81.96 | Mlig455_032214 | Neo: Irradiation Age: Down-Up-Up, logFC(26M/2M)=0.532 Region-enriched R4: 1.297/0.00961 |
PURA | Mlig455_032214 {REF} {Length: 1856} {TRANSSPLICED} {Pfam: PurA ssDNA and RNA-binding protein [PF04845.15, score=266.6]; Protein of unknown function (DUF3276) [PF11680.10, score=28.8]} {Human: ENSG00000185129, PURA, purine rich element binding protein A, [RH, Score=194, Expect=2e-60]; ENSG00000146676, PURB, purine rich element binding protein B, [RH, Score=185, Expect=6e-57]} {Mouse: ENSMUSG00000043991, Pura, purine rich element binding protein A, [RH, Score=194, Expect=1e-60]; ENSMUSG00000094483, Purb, purine rich element binding protein B, [RH, Score=185, Expect=6e-57]} {Dmel: FBgn0022361, Pur-alpha, Purine-rich binding protein-alpha, [RH, Score=231, Expect=7e-76]} {Celegans: WBGene00004046, plp-1, Pur alpha Like Protein, [Score=134, Expect=2e-38]} {Smed: dd_Smed_v6_346_0_1, dd_Smed_v6_346_0_1, [RH, Score=244, Expect=2e-81]} {RNA1509_623} {RNA1310_13231.1} {RNA815_5606.1} |
Cumulative graph for MligTC455_53525
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.251 | 6.486 | 0.68709 | 1.00000 | |
| RegionR2 | -1.348 | 6.486 | 0.00208 | 0.03603 | |
| RegionR3 | 0.061 | 6.486 | 0.85941 | 1.00000 | |
| RegionR4 | 1.297 | 6.486 | 0.00090 | 0.00961 | |
| RegionR5 | 0.937 | 6.486 | 0.00338 | 0.02582 | |
| RegionR6 | -0.07 | 6.486 | 0.84419 | 1.00000 | |
| RegionR7 | 0.018 | 6.486 | 0.96087 | 1.00000 | |
| RegionR8 | -1.146 | 6.486 | 0.01825 | 0.26237 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.134 | 6.486 | 0.86037 | 1.00000 | |
| RegenerationR2 | 0.772 | 6.486 | 0.08186 | 0.46061 | |
| RegenerationR3 | 0.455 | 6.486 | 0.31671 | 0.74569 | |
| RegenerationR4 | 0.289 | 6.486 | 0.52699 | 0.88295 | |
| RegenerationR5 | -0.096 | 6.486 | 0.82591 | 0.99626 | |
| RegenerationR6 | 0.926 | 6.486 | 0.03492 | 0.23419 | |
| RegenerationBL | 0.938 | 6.486 | 0.01793 | 0.14345 | |
| RegenerationTP | 0.8 | 6.486 | 0.07934 | 0.44939 |
Genes with expression patterns similar to MligTC455_53525
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_53525 | 3934 | 81.96 | Mlig455_032214 | Neo: Irradiation Age: Down-Up-Up, logFC(26M/2M)=0.532 Region-enriched R4: 1.297/0.00961 |
PURA | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_032214 {REF} {Length: 1856} {TRANSSPLICED} {Pfam: PurA ssDNA and RNA-binding protein [PF04845.15, score=266.6]; Protein of unknown function (DUF3276) [PF11680.10, score=28.8]} {Human: ENSG00000185129, PURA, purine rich element binding protein A, [RH, Score=194, Expect=2e-60]; ENSG00000146676, PURB, purine rich element binding protein B, [RH, Score=185, Expect=6e-57]} {Mouse: ENSMUSG00000043991, Pura, purine rich element binding protein A, [RH, Score=194, Expect=1e-60]; ENSMUSG00000094483, Purb, purine rich element binding protein B, [RH, Score=185, Expect=6e-57]} {Dmel: FBgn0022361, Pur-alpha, Purine-rich binding protein-alpha, [RH, Score=231, Expect=7e-76]} {Celegans: WBGene00004046, plp-1, Pur alpha Like Protein, [Score=134, Expect=2e-38]} {Smed: dd_Smed_v6_346_0_1, dd_Smed_v6_346_0_1, [RH, Score=244, Expect=2e-81]} {RNA1509_623} {RNA1310_13231.1} {RNA815_5606.1} |
| 2. | MligTC455_47897 | 1453 | 30.28 | Mlig455_057771 | Neo: Int S/G2/M Age: - Region-enriched R5: 2.541/0.00000 |
ASF1A | 0.985 | - | - | - | 0.985 | - | - | Mlig455_057771 {REF} {Length: 1164} {TRANSSPLICED} {Pfam: ASF1 like histone chaperone [PF04729.15, score=215.3]} {Human: ENSG00000111875, ASF1A, anti-silencing function 1A histone chaperone, [RH, Score=211, Expect=3e-68]; ENSG00000105011, ASF1B, anti-silencing function 1B histone chaperone, [RH, Score=201, Expect=1e-64]} {Mouse: ENSMUSG00000019857, Asf1a, anti-silencing function 1A histone chaperone, [RH, Score=211, Expect=1e-68]; ENSMUSG00000005470, Asf1b, anti-silencing function 1B histone chaperone, [RH, Score=205, Expect=3e-66]} {Dmel: FBgn0029094, asf1, anti-silencing factor 1, [RH, Score=206, Expect=1e-66]} {Celegans: WBGene00007277, asfl-1, Probable histone chaperone asf-1-like protein, [RH, Score=171, Expect=1e-52]} {Smed: dd_Smed_v6_5120_0_1, dd_Smed_v6_5120_0_1, [RH, Score=211, Expect=1e-68]} {RNA1509_22702, RNA1509_23173, RNA1509_32748} {RNA1310_10040, RNA1509_22702, RNA1509_23173, RNA1509_32748} {RNA1509_22702, RNA1509_23173, RNA1509_32748, RNA815_13388} |
Berezikov Lab - 2020-2021 © ERIBA