TomoSeq data search

Data search

Results for MligTC455_53551

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_53551	1715	35.73	Mlig455_053850	Neo: - Age: Down-Up-Up	TMCO1	Mlig455_053850 {REF} {Length: 1187} {TRANSSPLICED} {Pfam: Integral membrane protein EMC3/TMCO1-like [PF01956.18, score=134.8]; CHD5-like protein [PF04420.16, score=19.1]} {Human: ENSG00000143183, TMCO1, transmembrane and coiled-coil domains 1, [RH, Score=223, Expect=2e-74]} {Mouse: ENSMUSG00000052428, Tmco1, transmembrane and coiled-coil domains 1, [RH, Score=223, Expect=1e-74]} {Dmel: FBgn0032746, CG10470, [RH, Score=254, Expect=3e-87]} {Celegans: WBGene00009045, F22B5.10, Calcium load-activated calcium channel homolog, [RH, Score=214, Expect=2e-71]} {Smed: dd_Smed_v6_2854_0_1, dd_Smed_v6_2854_0_1, [RH, Score=280, Expect=2e-97]} {RNA1509_11030} {RNA1310_868} {RNA815_1694.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_53551

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.244	5.35	0.70574	1.00000
RegionR2	-0.199	5.35	0.53633	0.90592
RegionR3	0.352	5.35	0.16901	0.69311
RegionR4	0.356	5.35	0.20867	0.49246
RegionR5	0.661	5.35	0.00430	0.03090
RegionR6	0.267	5.35	0.31257	0.90174
RegionR7	-0.522	5.35	0.14586	0.71025
RegionR8	-0.67	5.35	0.13121	0.66314

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-1.314	5.35	0.20403	0.94442
RegenerationR2	0.278	5.35	0.32918	0.76695
RegenerationR3	-0.074	5.35	0.80156	0.98310
RegenerationR4	0.239	5.35	0.41511	0.82340
RegenerationR5	0.115	5.35	0.67360	0.94247
RegenerationR6	0.262	5.35	0.38747	0.72758
RegenerationBL	0.747	5.35	0.02538	0.17518
RegenerationTP	0.36	5.35	0.37503	0.81146

Genes with expression patterns similar to MligTC455_53551

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_53551	1715	35.73	Mlig455_053850	Neo: - Age: Down-Up-Up	TMCO1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_053850 {REF} {Length: 1187} {TRANSSPLICED} {Pfam: Integral membrane protein EMC3/TMCO1-like [PF01956.18, score=134.8]; CHD5-like protein [PF04420.16, score=19.1]} {Human: ENSG00000143183, TMCO1, transmembrane and coiled-coil domains 1, [RH, Score=223, Expect=2e-74]} {Mouse: ENSMUSG00000052428, Tmco1, transmembrane and coiled-coil domains 1, [RH, Score=223, Expect=1e-74]} {Dmel: FBgn0032746, CG10470, [RH, Score=254, Expect=3e-87]} {Celegans: WBGene00009045, F22B5.10, Calcium load-activated calcium channel homolog, [RH, Score=214, Expect=2e-71]} {Smed: dd_Smed_v6_2854_0_1, dd_Smed_v6_2854_0_1, [RH, Score=280, Expect=2e-97]} {RNA1509_11030} {RNA1310_868} {RNA815_1694.1}
2.	MligTC455_22081	2321	48.34	Mlig455_009897, Mlig455_056999, Mlig455_057059	Neo: - Age: Up-Down-Down	ROCK2	1.768	-	-	-	0.953	-	0.815	Mlig455_009897 {REF} {Length: 6228} {TRANSSPLICED} {Pfam: Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=28.6]; PH domain [PF00169.31, score=22.6]; Rho Binding [PF08912.13, score=21.6]} {Human: ENSG00000134318, ROCK2, Rho associated coiled-coil containing protein kinase 2, [RH, Score=224, Expect=2e-62]} {Mouse: ENSMUSG00000020580, Rock2, Rho-associated coiled-coil containing protein kinase 2, [Score=220, Expect=2e-59]; ENSMUSG00000024290, Rock1, Rho-associated coiled-coil containing protein kinase 1, [Score=213, Expect=4e-57]} {Dmel: FBgn0026181, Rok, Rho kinase, [Score=200, Expect=7e-53]} {Celegans: WBGene00002694, let-502, Rho-associated protein kinase let-502, [Score=99.4, Expect=4e-21]} {Smed: dd_Smed_v6_2914_0_1, dd_Smed_v6_2914_0_1, [Score=108, Expect=5e-24]} {RNA1509_14728, RNA1509_6249} {RNA1310_2176.1, RNA1509_14728} {RNA1509_14728, RNA815_633} Mlig455_056999 {REF} {Length: 6180} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=166.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=84.9]; Kinase-like [PF14531.8, score=42.3]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=27.0]; PH domain [PF00169.31, score=21.3]; Rho Binding [PF08912.13, score=21.0]; ABC1 atypical kinase-like domain [PF03109.18, score=19.6]} {Human: ENSG00000134318, ROCK2, Rho associated coiled-coil containing protein kinase 2, [RH, Score=474, Expect=7e-146]} {Mouse: ENSMUSG00000020580, Rock2, Rho-associated coiled-coil containing protein kinase 2, [RH, Score=477, Expect=7e-147]} {Dmel: FBgn0026181, Rok, Rho kinase, [Score=462, Expect=7e-142]} {Celegans: WBGene00002694, let-502, Rho-associated protein kinase let-502, [Score=333, Expect=2e-96]} {Smed: dd_Smed_v6_2914_0_1, dd_Smed_v6_2914_0_1, [RH, Score=324, Expect=3e-93]} {RNA1509_14728} {RNA1310_2176.1} {RNA815_633} Mlig455_057059 {REF} {Length: 6178} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=166.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=84.9]; Kinase-like [PF14531.8, score=42.3]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=27.0]; PH domain [PF00169.31, score=21.3]; Rho Binding [PF08912.13, score=21.0]; ABC1 atypical kinase-like domain [PF03109.18, score=19.6]} {Human: ENSG00000134318, ROCK2, Rho associated coiled-coil containing protein kinase 2, [RH, Score=474, Expect=7e-146]} {Mouse: ENSMUSG00000020580, Rock2, Rho-associated coiled-coil containing protein kinase 2, [RH, Score=477, Expect=7e-147]} {Dmel: FBgn0026181, Rok, Rho kinase, [Score=462, Expect=7e-142]} {Celegans: WBGene00002694, let-502, Rho-associated protein kinase let-502, [Score=333, Expect=2e-96]} {Smed: dd_Smed_v6_2914_0_1, dd_Smed_v6_2914_0_1, [RH, Score=324, Expect=3e-93]} {RNA1509_11990, RNA1509_14728, RNA1509_37309, RNA1509_50417} {RNA1310_2176.1, RNA1509_11990, RNA1509_37309, RNA1509_50417} {RNA1509_11990, RNA1509_37309, RNA1509_50417, RNA815_633}
3.	MligTC455_50019	248	5.17	Mlig455_050542	Neo: Int S/G2/M Age: Up-Up-Down	NSD2	0.951	-	-	-	0.951	-	-	Mlig455_050542 {REF} {Length: 4778} {TRANSSPLICED} {Pfam: PWWP domain [PF00855.19, score=113.6]; SET domain [PF00856.30, score=80.1]; AWS domain [PF17907.3, score=47.6]; PHD-finger [PF00628.31, score=38.8]; NSD Cys-His rich domain [PF17982.3, score=32.8]} {Human: ENSG00000109685, NSD2, nuclear receptor binding SET domain protein 2, [RH, Score=691, Expect=0.0]; ENSG00000165671, NSD1, nuclear receptor binding SET domain protein 1, [RH, Score=667, Expect=0.0]; ENSG00000147548, NSD3, nuclear receptor binding SET domain protein 3, [RH, Score=664, Expect=0.0]} {Mouse: ENSMUSG00000057406, Nsd2, nuclear receptor binding SET domain protein 2, [RH, Score=696, Expect=0.0]; ENSMUSG00000021488, Nsd1, nuclear receptor-binding SET-domain protein 1, [RH, Score=674, Expect=0.0]} {Dmel: FBgn0039559, NSD, Nuclear receptor binding SET domain protein, [RH, Score=431, Expect=1e-130]} {Celegans: WBGene00016603, met-1, Histone-lysine N-methyltransferase, [Score=142, Expect=5e-34]} {Smed: dd_Smed_v6_4755_0_1, dd_Smed_v6_4755_0_1, [RH, Score=582, Expect=0.0]} {RNA1509_8385} {RNA1310_4002, RNA1509_8385} {RNA1509_8385, RNA815_849}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_53551

1715

35.73

Mlig455_053850

Neo: -

Age: Down-Up-Up

TMCO1

1.000

MligTC455_22081

2321

48.34

Mlig455_009897, Mlig455_056999, Mlig455_057059

Neo: -

Age: Up-Down-Down

ROCK2

1.768

0.953

0.815

Mlig455_009897 {REF} {Length: 6228} {TRANSSPLICED} {Pfam: Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=28.6]; PH domain [PF00169.31, score=22.6]; Rho Binding [PF08912.13, score=21.6]} {Human: ENSG00000134318, ROCK2, Rho associated coiled-coil containing protein kinase 2, [RH, Score=224, Expect=2e-62]} {Mouse: ENSMUSG00000020580, Rock2, Rho-associated coiled-coil containing protein kinase 2, [Score=220, Expect=2e-59]; ENSMUSG00000024290, Rock1, Rho-associated coiled-coil containing protein kinase 1, [Score=213, Expect=4e-57]} {Dmel: FBgn0026181, Rok, Rho kinase, [Score=200, Expect=7e-53]} {Celegans: WBGene00002694, let-502, Rho-associated protein kinase let-502, [Score=99.4, Expect=4e-21]} {Smed: dd_Smed_v6_2914_0_1, dd_Smed_v6_2914_0_1, [Score=108, Expect=5e-24]} {RNA1509_14728, RNA1509_6249} {RNA1310_2176.1, RNA1509_14728} {RNA1509_14728, RNA815_633}

Mlig455_056999 {REF} {Length: 6180} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=166.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=84.9]; Kinase-like [PF14531.8, score=42.3]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=27.0]; PH domain [PF00169.31, score=21.3]; Rho Binding [PF08912.13, score=21.0]; ABC1 atypical kinase-like domain [PF03109.18, score=19.6]} {Human: ENSG00000134318, ROCK2, Rho associated coiled-coil containing protein kinase 2, [RH, Score=474, Expect=7e-146]} {Mouse: ENSMUSG00000020580, Rock2, Rho-associated coiled-coil containing protein kinase 2, [RH, Score=477, Expect=7e-147]} {Dmel: FBgn0026181, Rok, Rho kinase, [Score=462, Expect=7e-142]} {Celegans: WBGene00002694, let-502, Rho-associated protein kinase let-502, [Score=333, Expect=2e-96]} {Smed: dd_Smed_v6_2914_0_1, dd_Smed_v6_2914_0_1, [RH, Score=324, Expect=3e-93]} {RNA1509_14728} {RNA1310_2176.1} {RNA815_633}

Mlig455_057059 {REF} {Length: 6178} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=166.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=84.9]; Kinase-like [PF14531.8, score=42.3]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=27.0]; PH domain [PF00169.31, score=21.3]; Rho Binding [PF08912.13, score=21.0]; ABC1 atypical kinase-like domain [PF03109.18, score=19.6]} {Human: ENSG00000134318, ROCK2, Rho associated coiled-coil containing protein kinase 2, [RH, Score=474, Expect=7e-146]} {Mouse: ENSMUSG00000020580, Rock2, Rho-associated coiled-coil containing protein kinase 2, [RH, Score=477, Expect=7e-147]} {Dmel: FBgn0026181, Rok, Rho kinase, [Score=462, Expect=7e-142]} {Celegans: WBGene00002694, let-502, Rho-associated protein kinase let-502, [Score=333, Expect=2e-96]} {Smed: dd_Smed_v6_2914_0_1, dd_Smed_v6_2914_0_1, [RH, Score=324, Expect=3e-93]} {RNA1509_11990, RNA1509_14728, RNA1509_37309, RNA1509_50417} {RNA1310_2176.1, RNA1509_11990, RNA1509_37309, RNA1509_50417} {RNA1509_11990, RNA1509_37309, RNA1509_50417, RNA815_633}

MligTC455_50019

248

5.17

Mlig455_050542

Neo: Int S/G2/M

Age: Up-Up-Down

NSD2

0.951

Mlig455_050542 {REF} {Length: 4778} {TRANSSPLICED} {Pfam: PWWP domain [PF00855.19, score=113.6]; SET domain [PF00856.30, score=80.1]; AWS domain [PF17907.3, score=47.6]; PHD-finger [PF00628.31, score=38.8]; NSD Cys-His rich domain [PF17982.3, score=32.8]} {Human: ENSG00000109685, NSD2, nuclear receptor binding SET domain protein 2, [RH, Score=691, Expect=0.0]; ENSG00000165671, NSD1, nuclear receptor binding SET domain protein 1, [RH, Score=667, Expect=0.0]; ENSG00000147548, NSD3, nuclear receptor binding SET domain protein 3, [RH, Score=664, Expect=0.0]} {Mouse: ENSMUSG00000057406, Nsd2, nuclear receptor binding SET domain protein 2, [RH, Score=696, Expect=0.0]; ENSMUSG00000021488, Nsd1, nuclear receptor-binding SET-domain protein 1, [RH, Score=674, Expect=0.0]} {Dmel: FBgn0039559, NSD, Nuclear receptor binding SET domain protein, [RH, Score=431, Expect=1e-130]} {Celegans: WBGene00016603, met-1, Histone-lysine N-methyltransferase, [Score=142, Expect=5e-34]} {Smed: dd_Smed_v6_4755_0_1, dd_Smed_v6_4755_0_1, [RH, Score=582, Expect=0.0]} {RNA1509_8385} {RNA1310_4002, RNA1509_8385} {RNA1509_8385, RNA815_849}