TomoSeq data search

Data search

Results for MligTC455_53553

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_53553	1446	30.12	Mlig455_016137	Neo: - Age: -	WDSUB1	Mlig455_016137 {REF} {Length: 2155} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=159.6]; U-box domain [PF04564.17, score=74.8]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=48.1]; SAM domain (Sterile alpha motif) [PF07647.19, score=41.3]; SAM domain (Sterile alpha motif) [PF00536.32, score=36.7]; Eukaryotic translation initiation factor eIF2A [PF08662.13, score=22.4]; Zinc-finger of nitric oxide synthase-interacting protein [PF15906.7, score=22.1]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=20.0]} {Human: ENSG00000196151, WDSUB1, WD repeat, sterile alpha motif and U-box domain containing 1, [RH, Score=322, Expect=1e-104]} {Mouse: ENSMUSG00000026988, Wdsub1, WD repeat, SAM and U-box domain containing 1, [RH, Score=313, Expect=3e-101]} {Dmel: FBgn0040066, wds, will die slowly, [Score=100, Expect=7e-23]} {Celegans: WBGene00010572, wdr-5.2, WD repeat-containing protein wdr-5.2, [Score=96.3, Expect=2e-21]} {Smed: dd_Smed_v6_3359_0_1, dd_Smed_v6_3359_0_1, [Score=96.7, Expect=2e-21]} {RNA1509_10244, RNA1509_57723} {RNA1310_2937.1, RNA1509_10244, RNA1509_57723} {RNA1509_10244, RNA1509_57723, RNA815_1681.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_53553

1446

30.12

Mlig455_016137

Neo: -

Age: -

WDSUB1

Mlig455_016137 {REF} {Length: 2155} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=159.6]; U-box domain [PF04564.17, score=74.8]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=48.1]; SAM domain (Sterile alpha motif) [PF07647.19, score=41.3]; SAM domain (Sterile alpha motif) [PF00536.32, score=36.7]; Eukaryotic translation initiation factor eIF2A [PF08662.13, score=22.4]; Zinc-finger of nitric oxide synthase-interacting protein [PF15906.7, score=22.1]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=20.0]} {Human: ENSG00000196151, WDSUB1, WD repeat, sterile alpha motif and U-box domain containing 1, [RH, Score=322, Expect=1e-104]} {Mouse: ENSMUSG00000026988, Wdsub1, WD repeat, SAM and U-box domain containing 1, [RH, Score=313, Expect=3e-101]} {Dmel: FBgn0040066, wds, will die slowly, [Score=100, Expect=7e-23]} {Celegans: WBGene00010572, wdr-5.2, WD repeat-containing protein wdr-5.2, [Score=96.3, Expect=2e-21]} {Smed: dd_Smed_v6_3359_0_1, dd_Smed_v6_3359_0_1, [Score=96.7, Expect=2e-21]} {RNA1509_10244, RNA1509_57723} {RNA1310_2937.1, RNA1509_10244, RNA1509_57723} {RNA1509_10244, RNA1509_57723, RNA815_1681.1}

Cumulative graph for MligTC455_53553

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.599	5.116	0.48195	1.00000
RegionR2	-0.004	5.116	0.99053	1.00000
RegionR3	0.382	5.116	0.14736	0.65251
RegionR4	0.948	5.116	0.00090	0.00957
RegionR5	0.328	5.116	0.18093	0.45799
RegionR6	0.333	5.116	0.22320	0.80396
RegionR7	-1.233	5.116	0.00695	0.13761
RegionR8	-0.154	5.116	0.76553	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.021	5.116	0.98630	1.00000
RegenerationR2	0.183	5.116	0.45140	0.84791
RegenerationR3	-0.117	5.116	0.65931	0.93302
RegenerationR4	-0.448	5.116	0.08676	0.46325
RegenerationR5	0.265	5.116	0.27758	0.70679
RegenerationR6	-0.029	5.116	0.91524	1.00000
RegenerationBL	0.661	5.116	0.06134	0.28751
RegenerationTP	0.542	5.116	0.21315	0.65625

Genes with expression patterns similar to MligTC455_53553

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_53553	1446	30.12	Mlig455_016137	Neo: - Age: -	WDSUB1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_016137 {REF} {Length: 2155} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=159.6]; U-box domain [PF04564.17, score=74.8]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=48.1]; SAM domain (Sterile alpha motif) [PF07647.19, score=41.3]; SAM domain (Sterile alpha motif) [PF00536.32, score=36.7]; Eukaryotic translation initiation factor eIF2A [PF08662.13, score=22.4]; Zinc-finger of nitric oxide synthase-interacting protein [PF15906.7, score=22.1]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=20.0]} {Human: ENSG00000196151, WDSUB1, WD repeat, sterile alpha motif and U-box domain containing 1, [RH, Score=322, Expect=1e-104]} {Mouse: ENSMUSG00000026988, Wdsub1, WD repeat, SAM and U-box domain containing 1, [RH, Score=313, Expect=3e-101]} {Dmel: FBgn0040066, wds, will die slowly, [Score=100, Expect=7e-23]} {Celegans: WBGene00010572, wdr-5.2, WD repeat-containing protein wdr-5.2, [Score=96.3, Expect=2e-21]} {Smed: dd_Smed_v6_3359_0_1, dd_Smed_v6_3359_0_1, [Score=96.7, Expect=2e-21]} {RNA1509_10244, RNA1509_57723} {RNA1310_2937.1, RNA1509_10244, RNA1509_57723} {RNA1509_10244, RNA1509_57723, RNA815_1681.1}
2.	MligTC455_05843	1328	27.66	Mlig455_050073	Neo: - Age: -	STK38	0.955	-	-	-	0.955	-	-	Mlig455_050073 {REF} {Length: 2171} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=208.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=101.7]; ABC1 atypical kinase-like domain [PF03109.18, score=30.5]; Protein kinase C terminal domain [PF00433.26, score=20.0]; Kinase-like [PF14531.8, score=18.0]} {Human: ENSG00000112079, STK38, serine/threonine kinase 38, [RH, Score=626, Expect=0.0]} {Mouse: ENSMUSG00000024006, Stk38, serine/threonine kinase 38, [RH, Score=620, Expect=0.0]} {Dmel: FBgn0003744, trc, tricornered, [RH, Score=615, Expect=0.0]} {Celegans: WBGene00004727, sax-1, Serine/threonine-protein kinase sax-1, [RH, Score=558, Expect=0.0]} {Smed: dd_Smed_v6_6462_0_1, dd_Smed_v6_6462_0_1, [RH, Score=646, Expect=0.0]} {RNA1509_5097} {RNA1310_3307} {RNA815_3142.1}
3.	MligTC455_51637	1848	38.49	Mlig455_018984, Mlig455_055718	Neo: - Age: -	TOR1A, TOR1B	0.95	-	-	-	-	0.950	-	Mlig455_018984 {REF} {Length: 1227} {Pfam: Torsin [PF06309.13, score=124.3]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=22.6]; AAA domain (dynein-related subfamily) [PF07728.16, score=21.8]} {Human: ENSG00000136816, TOR1B, torsin family 1 member B, [RH, Score=240, Expect=2e-77]; ENSG00000136827, TOR1A, torsin family 1 member A, [RH, Score=234, Expect=6e-75]} {Mouse: ENSMUSG00000026848, Tor1b, torsin family 1, member B, [RH, Score=236, Expect=5e-76]; ENSMUSG00000026849, Tor1a, torsin family 1, member A (torsin A), [RH, Score=229, Expect=5e-73]} {Dmel: FBgn0025615, Torsin, [Score=160, Expect=2e-46]} {Celegans: WBGene00003870, ooc-5, Torsin-like protein, [Score=211, Expect=2e-66]} {Smed: dd_Smed_v6_7561_0_1, dd_Smed_v6_7561_0_1, [Score=199, Expect=6e-62]} {RNA1509_14091} {RNA1310_23425.1} {RNA815_9839.1} Mlig455_055718 {REF} {Length: 1275} {Pfam: Torsin [PF06309.13, score=123.7]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=22.4]; AAA domain (dynein-related subfamily) [PF07728.16, score=21.6]} {Human: ENSG00000136827, TOR1A, torsin family 1 member A, [RH, Score=236, Expect=2e-75]} {Mouse: ENSMUSG00000026848, Tor1b, torsin family 1, member B, [RH, Score=236, Expect=9e-76]; ENSMUSG00000026849, Tor1a, torsin family 1, member A (torsin A), [RH, Score=229, Expect=4e-73]} {Dmel: FBgn0025615, Torsin, [Score=159, Expect=7e-46]} {Celegans: WBGene00003870, ooc-5, Torsin-like protein, [Score=212, Expect=3e-66]} {Smed: dd_Smed_v6_7561_0_1, dd_Smed_v6_7561_0_1, [Score=199, Expect=1e-61]} {RNA1509_14091} {RNA1310_23425.1} {RNA815_9839.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_53553

1446

30.12

Mlig455_016137

Neo: -

Age: -

WDSUB1

1.000

MligTC455_05843

1328

27.66

Mlig455_050073

Neo: -

Age: -

STK38

0.955

Mlig455_050073 {REF} {Length: 2171} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=208.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=101.7]; ABC1 atypical kinase-like domain [PF03109.18, score=30.5]; Protein kinase C terminal domain [PF00433.26, score=20.0]; Kinase-like [PF14531.8, score=18.0]} {Human: ENSG00000112079, STK38, serine/threonine kinase 38, [RH, Score=626, Expect=0.0]} {Mouse: ENSMUSG00000024006, Stk38, serine/threonine kinase 38, [RH, Score=620, Expect=0.0]} {Dmel: FBgn0003744, trc, tricornered, [RH, Score=615, Expect=0.0]} {Celegans: WBGene00004727, sax-1, Serine/threonine-protein kinase sax-1, [RH, Score=558, Expect=0.0]} {Smed: dd_Smed_v6_6462_0_1, dd_Smed_v6_6462_0_1, [RH, Score=646, Expect=0.0]} {RNA1509_5097} {RNA1310_3307} {RNA815_3142.1}

MligTC455_51637

1848

38.49

Mlig455_018984, Mlig455_055718

Neo: -

Age: -

TOR1A, TOR1B

0.95

0.950

Mlig455_018984 {REF} {Length: 1227} {Pfam: Torsin [PF06309.13, score=124.3]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=22.6]; AAA domain (dynein-related subfamily) [PF07728.16, score=21.8]} {Human: ENSG00000136816, TOR1B, torsin family 1 member B, [RH, Score=240, Expect=2e-77]; ENSG00000136827, TOR1A, torsin family 1 member A, [RH, Score=234, Expect=6e-75]} {Mouse: ENSMUSG00000026848, Tor1b, torsin family 1, member B, [RH, Score=236, Expect=5e-76]; ENSMUSG00000026849, Tor1a, torsin family 1, member A (torsin A), [RH, Score=229, Expect=5e-73]} {Dmel: FBgn0025615, Torsin, [Score=160, Expect=2e-46]} {Celegans: WBGene00003870, ooc-5, Torsin-like protein, [Score=211, Expect=2e-66]} {Smed: dd_Smed_v6_7561_0_1, dd_Smed_v6_7561_0_1, [Score=199, Expect=6e-62]} {RNA1509_14091} {RNA1310_23425.1} {RNA815_9839.1}

Mlig455_055718 {REF} {Length: 1275} {Pfam: Torsin [PF06309.13, score=123.7]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=22.4]; AAA domain (dynein-related subfamily) [PF07728.16, score=21.6]} {Human: ENSG00000136827, TOR1A, torsin family 1 member A, [RH, Score=236, Expect=2e-75]} {Mouse: ENSMUSG00000026848, Tor1b, torsin family 1, member B, [RH, Score=236, Expect=9e-76]; ENSMUSG00000026849, Tor1a, torsin family 1, member A (torsin A), [RH, Score=229, Expect=4e-73]} {Dmel: FBgn0025615, Torsin, [Score=159, Expect=7e-46]} {Celegans: WBGene00003870, ooc-5, Torsin-like protein, [Score=212, Expect=3e-66]} {Smed: dd_Smed_v6_7561_0_1, dd_Smed_v6_7561_0_1, [Score=199, Expect=1e-61]} {RNA1509_14091} {RNA1310_23425.1} {RNA815_9839.1}