TomoSeq data search

Data search

Results for MligTC455_53568

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_53568	882	18.37	Mlig455_018156, Mlig455_018174	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.312 Region-enriched R6: 1.513/0.03623	TRPA1	Mlig455_018156 {REF} {Length: 4591} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=302.9]; Ankyrin repeat [PF00023.32, score=235.4]; Ankyrin repeats (many copies) [PF13637.8, score=235.1]; Ankyrin repeats (many copies) [PF13857.8, score=227.3]; Ankyrin repeat [PF13606.8, score=198.1]; Ion transport protein [PF00520.33, score=42.0]} {Human: ENSG00000104321, TRPA1, transient receptor potential cation channel subfamily A member 1, [Score=315, Expect=7e-89]} {Mouse: ENSMUSG00000032769, Trpa1, transient receptor potential cation channel, subfamily A, member 1, [Score=331, Expect=9e-95]} {Dmel: FBgn0035934, TrpA1, Transient receptor potential cation channel A1, [Score=322, Expect=6e-91]} {Celegans: WBGene00007801, trpa-1, Transient receptor potential cation channel subfamily A member 1 homolog, [RH, Score=544, Expect=9e-172]} {Smed: dd_Smed_v6_6201_0_2, dd_Smed_v6_6201_0_2, [RH, Score=746, Expect=0.0]} {RNA1509_8472} {RNA1310_1590.1} {RNA815_450.1} Mlig455_018174 {REF} {Length: 4611} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=304.3]; Ankyrin repeat [PF00023.32, score=236.8]; Ankyrin repeats (many copies) [PF13637.8, score=236.1]; Ankyrin repeats (many copies) [PF13857.8, score=228.4]; Ankyrin repeat [PF13606.8, score=199.5]; Ion transport protein [PF00520.33, score=42.1]} {Human: ENSG00000104321, TRPA1, transient receptor potential cation channel subfamily A member 1, [Score=309, Expect=3e-87]} {Mouse: ENSMUSG00000032769, Trpa1, transient receptor potential cation channel, subfamily A, member 1, [Score=326, Expect=3e-93]} {Dmel: FBgn0035934, TrpA1, Transient receptor potential cation channel A1, [Score=322, Expect=3e-91]} {Celegans: WBGene00007801, trpa-1, Transient receptor potential cation channel subfamily A member 1 homolog, [RH, Score=528, Expect=1e-166]} {Smed: dd_Smed_v6_6201_0_1, dd_Smed_v6_6201_0_1, [Score=727, Expect=0.0]} {RNA1509_8472} {RNA1310_1590.1} {RNA815_450.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_53568

882

18.37

Mlig455_018156, Mlig455_018174

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.312

Region-enriched R6: 1.513/0.03623

TRPA1

Mlig455_018156 {REF} {Length: 4591} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=302.9]; Ankyrin repeat [PF00023.32, score=235.4]; Ankyrin repeats (many copies) [PF13637.8, score=235.1]; Ankyrin repeats (many copies) [PF13857.8, score=227.3]; Ankyrin repeat [PF13606.8, score=198.1]; Ion transport protein [PF00520.33, score=42.0]} {Human: ENSG00000104321, TRPA1, transient receptor potential cation channel subfamily A member 1, [Score=315, Expect=7e-89]} {Mouse: ENSMUSG00000032769, Trpa1, transient receptor potential cation channel, subfamily A, member 1, [Score=331, Expect=9e-95]} {Dmel: FBgn0035934, TrpA1, Transient receptor potential cation channel A1, [Score=322, Expect=6e-91]} {Celegans: WBGene00007801, trpa-1, Transient receptor potential cation channel subfamily A member 1 homolog, [RH, Score=544, Expect=9e-172]} {Smed: dd_Smed_v6_6201_0_2, dd_Smed_v6_6201_0_2, [RH, Score=746, Expect=0.0]} {RNA1509_8472} {RNA1310_1590.1} {RNA815_450.1}

Mlig455_018174 {REF} {Length: 4611} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=304.3]; Ankyrin repeat [PF00023.32, score=236.8]; Ankyrin repeats (many copies) [PF13637.8, score=236.1]; Ankyrin repeats (many copies) [PF13857.8, score=228.4]; Ankyrin repeat [PF13606.8, score=199.5]; Ion transport protein [PF00520.33, score=42.1]} {Human: ENSG00000104321, TRPA1, transient receptor potential cation channel subfamily A member 1, [Score=309, Expect=3e-87]} {Mouse: ENSMUSG00000032769, Trpa1, transient receptor potential cation channel, subfamily A, member 1, [Score=326, Expect=3e-93]} {Dmel: FBgn0035934, TrpA1, Transient receptor potential cation channel A1, [Score=322, Expect=3e-91]} {Celegans: WBGene00007801, trpa-1, Transient receptor potential cation channel subfamily A member 1 homolog, [RH, Score=528, Expect=1e-166]} {Smed: dd_Smed_v6_6201_0_1, dd_Smed_v6_6201_0_1, [Score=727, Expect=0.0]} {RNA1509_8472} {RNA1310_1590.1} {RNA815_450.1}

Cumulative graph for MligTC455_53568

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.256	4.534	0.13596	0.73934
RegionR2	1.307	4.534	0.02019	0.15421
RegionR3	0.285	4.534	0.55650	1.00000
RegionR4	-0.545	4.534	0.33930	0.65899
RegionR5	0.61	4.534	0.16736	0.43391
RegionR6	1.513	4.534	0.00091	0.03623
RegionR7	0.011	4.534	0.98307	1.00000
RegionR8	-0.925	4.534	0.31774	0.95076

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.772	4.534	0.71912	1.00000
RegenerationR2	-0.29	4.534	0.51504	0.87769
RegenerationR3	0.952	4.534	0.06069	0.41910
RegenerationR4	0.77	4.534	0.12820	0.54268
RegenerationR5	0.756	4.534	0.11331	0.50752
RegenerationR6	0.365	4.534	0.43663	0.76183
RegenerationBL	0.042	4.534	0.94112	1.00000
RegenerationTP	0.442	4.534	0.53133	0.92157

Genes with expression patterns similar to MligTC455_53568

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_53568	882	18.37	Mlig455_018156, Mlig455_018174	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.312 Region-enriched R6: 1.513/0.03623	TRPA1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_018156 {REF} {Length: 4591} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=302.9]; Ankyrin repeat [PF00023.32, score=235.4]; Ankyrin repeats (many copies) [PF13637.8, score=235.1]; Ankyrin repeats (many copies) [PF13857.8, score=227.3]; Ankyrin repeat [PF13606.8, score=198.1]; Ion transport protein [PF00520.33, score=42.0]} {Human: ENSG00000104321, TRPA1, transient receptor potential cation channel subfamily A member 1, [Score=315, Expect=7e-89]} {Mouse: ENSMUSG00000032769, Trpa1, transient receptor potential cation channel, subfamily A, member 1, [Score=331, Expect=9e-95]} {Dmel: FBgn0035934, TrpA1, Transient receptor potential cation channel A1, [Score=322, Expect=6e-91]} {Celegans: WBGene00007801, trpa-1, Transient receptor potential cation channel subfamily A member 1 homolog, [RH, Score=544, Expect=9e-172]} {Smed: dd_Smed_v6_6201_0_2, dd_Smed_v6_6201_0_2, [RH, Score=746, Expect=0.0]} {RNA1509_8472} {RNA1310_1590.1} {RNA815_450.1} Mlig455_018174 {REF} {Length: 4611} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=304.3]; Ankyrin repeat [PF00023.32, score=236.8]; Ankyrin repeats (many copies) [PF13637.8, score=236.1]; Ankyrin repeats (many copies) [PF13857.8, score=228.4]; Ankyrin repeat [PF13606.8, score=199.5]; Ion transport protein [PF00520.33, score=42.1]} {Human: ENSG00000104321, TRPA1, transient receptor potential cation channel subfamily A member 1, [Score=309, Expect=3e-87]} {Mouse: ENSMUSG00000032769, Trpa1, transient receptor potential cation channel, subfamily A, member 1, [Score=326, Expect=3e-93]} {Dmel: FBgn0035934, TrpA1, Transient receptor potential cation channel A1, [Score=322, Expect=3e-91]} {Celegans: WBGene00007801, trpa-1, Transient receptor potential cation channel subfamily A member 1 homolog, [RH, Score=528, Expect=1e-166]} {Smed: dd_Smed_v6_6201_0_1, dd_Smed_v6_6201_0_1, [Score=727, Expect=0.0]} {RNA1509_8472} {RNA1310_1590.1} {RNA815_450.1}
2.	MligTC455_53567	410	8.55	Mlig455_008583	Neo: - Age: Up-Down-Down	TRPA1	5.856	0.988	0.983	0.972	0.951	0.977	0.985	Mlig455_008583 {REF} {Length: 4608} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=283.0]; Ankyrin repeats (many copies) [PF13637.8, score=235.7]; Ankyrin repeat [PF00023.32, score=234.2]; Ankyrin repeats (many copies) [PF13857.8, score=225.7]; Ankyrin repeat [PF13606.8, score=200.8]; Ion transport protein [PF00520.33, score=41.3]} {Human: ENSG00000104321, TRPA1, transient receptor potential cation channel subfamily A member 1, [Score=314, Expect=1e-88]} {Mouse: ENSMUSG00000032769, Trpa1, transient receptor potential cation channel, subfamily A, member 1, [Score=328, Expect=8e-94]} {Dmel: FBgn0035934, TrpA1, Transient receptor potential cation channel A1, [Score=324, Expect=7e-92]} {Celegans: WBGene00007801, trpa-1, Transient receptor potential cation channel subfamily A member 1 homolog, [RH, Score=538, Expect=1e-169]} {Smed: dd_Smed_v6_6201_0_2, dd_Smed_v6_6201_0_2, [RH, Score=749, Expect=0.0]} {RNA1509_8472} {RNA1310_1590.1} {RNA815_450.1}
3.	MligTC455_33767	110	2.29	Mlig455_017008	Neo: - Age: -	ACBD5	0.966	-	-	-	-	-	0.966	Mlig455_017008 {REF} {Length: 6280} {TRANSSPLICED} {Pfam: Acyl CoA binding protein [PF00887.21, score=51.5]; Zinc finger, C2H2 type [PF00096.28, score=21.9]; C2H2-type zinc finger [PF13894.8, score=21.3]} {Human: ENSG00000107897, ACBD5, acyl-CoA binding domain containing 5, [Score=79.0, Expect=3e-14]; ENSG00000181513, ACBD4, acyl-CoA binding domain containing 4, [Score=75.9, Expect=4e-14]} {Mouse: ENSMUSG00000026781, Acbd5, acyl-Coenzyme A binding domain containing 5, [Score=77.8, Expect=5e-14]} {Dmel: FBgn0064116, CG33713, [Score=58.5, Expect=8e-09]} {Smed: dd_Smed_v6_5745_0_1, dd_Smed_v6_5745_0_1, [Score=57.8, Expect=9e-09]} {RNA1509_21133} {RNA1310_8873.1} {RNA815_3374}
4.	MligTC455_19886	82	1.72	Mlig455_062209	Neo: - Age: -		0.961	-	-	-	-	-	0.961	Mlig455_062209 {REF} {Length: 3409} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=42.5]} {Smed: dd_Smed_v6_8649_0_1, dd_Smed_v6_8649_0_1, [RH, Score=334, Expect=7e-106]} {RNA1509_22422} {RNA1310_4548} {RNA815_8182}
5.	MligTC455_13982	391	8.15	Mlig455_028538, Mlig455_064728	Neo: - Age: -		0.952	-	-	-	-	-	0.952	Mlig455_028538 {REF} {Length: 1943} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=32.4]} {Celegans: WBGene00011156, R09B3.3, [Score=50.1, Expect=5e-08]} {RNA1509_40007} {RNA1310_25577, RNA1509_40007} {RNA1509_40007, RNA815_11617} Mlig455_064728 {REF} {Length: 1950} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=36.0]} {Celegans: WBGene00011156, R09B3.3, [Score=48.9, Expect=1e-07]} {RNA1509_40007} {RNA1310_25577} {RNA815_11617}