TomoSeq data search

Data search

Results for MligTC455_53620

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_53620	848	17.67	Mlig455_045947, Mlig455_045975	Neo: - Age: -	IRS2	Mlig455_045947 {REF} {Length: 3505} {TRANSSPLICED} {Pfam: PTB domain (IRS-1 type) [PF02174.19, score=42.9]; PH domain [PF00169.31, score=27.3]} {Human: ENSG00000185950, IRS2, insulin receptor substrate 2, [RH, Score=69.3, Expect=2e-11]} {Mouse: ENSMUSG00000038894, Irs2, insulin receptor substrate 2, [RH, Score=64.7, Expect=4e-10]; ENSMUSG00000055980, Irs1, insulin receptor substrate 1, [RH, Score=63.5, Expect=7e-10]} {RNA1509_44686} {RNA1310_3305.1, RNA1509_44686} {RNA1509_44686, RNA815_950.1} Mlig455_045975 {REF} {Length: 3466} {TRANSSPLICED} {Pfam: PTB domain (IRS-1 type) [PF02174.19, score=42.9]; PH domain [PF00169.31, score=27.4]} {Human: ENSG00000185950, IRS2, insulin receptor substrate 2, [RH, Score=69.3, Expect=2e-11]} {Mouse: ENSMUSG00000038894, Irs2, insulin receptor substrate 2, [RH, Score=64.7, Expect=3e-10]; ENSMUSG00000055980, Irs1, insulin receptor substrate 1, [RH, Score=63.9, Expect=6e-10]} {RNA1509_44686, RNA1509_6919} {RNA1310_3305.1, RNA1509_6919} {RNA1509_6919, RNA815_950.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_53620

848

17.67

Mlig455_045947, Mlig455_045975

Neo: -

Age: -

IRS2

Mlig455_045947 {REF} {Length: 3505} {TRANSSPLICED} {Pfam: PTB domain (IRS-1 type) [PF02174.19, score=42.9]; PH domain [PF00169.31, score=27.3]} {Human: ENSG00000185950, IRS2, insulin receptor substrate 2, [RH, Score=69.3, Expect=2e-11]} {Mouse: ENSMUSG00000038894, Irs2, insulin receptor substrate 2, [RH, Score=64.7, Expect=4e-10]; ENSMUSG00000055980, Irs1, insulin receptor substrate 1, [RH, Score=63.5, Expect=7e-10]} {RNA1509_44686} {RNA1310_3305.1, RNA1509_44686} {RNA1509_44686, RNA815_950.1}

Mlig455_045975 {REF} {Length: 3466} {TRANSSPLICED} {Pfam: PTB domain (IRS-1 type) [PF02174.19, score=42.9]; PH domain [PF00169.31, score=27.4]} {Human: ENSG00000185950, IRS2, insulin receptor substrate 2, [RH, Score=69.3, Expect=2e-11]} {Mouse: ENSMUSG00000038894, Irs2, insulin receptor substrate 2, [RH, Score=64.7, Expect=3e-10]; ENSMUSG00000055980, Irs1, insulin receptor substrate 1, [RH, Score=63.9, Expect=6e-10]} {RNA1509_44686, RNA1509_6919} {RNA1310_3305.1, RNA1509_6919} {RNA1509_6919, RNA815_950.1}

Cumulative graph for MligTC455_53620

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.353	4.498	0.07645	0.60957
RegionR2	1.012	4.498	0.05000	0.26673
RegionR3	0.866	4.498	0.03051	0.30057
RegionR4	0.552	4.498	0.24160	0.53869
RegionR5	0.122	4.498	0.75651	1.00000
RegionR6	0.43	4.498	0.31798	0.90662
RegionR7	-0.765	4.498	0.17609	0.76973
RegionR8	0.136	4.498	0.81517	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-5.017	4.498	0.36833	1.00000
RegenerationR2	0.263	4.498	0.51444	0.87750
RegenerationR3	0.286	4.498	0.52851	0.87110
RegenerationR4	-0.329	4.498	0.49648	0.86728
RegenerationR5	0.242	4.498	0.58398	0.90217
RegenerationR6	-0.347	4.498	0.46820	0.78312
RegenerationBL	0.105	4.498	0.84654	1.00000
RegenerationTP	-0.246	4.498	0.69346	1.00000

Genes with expression patterns similar to MligTC455_53620

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_53620	848	17.67	Mlig455_045947, Mlig455_045975	Neo: - Age: -	IRS2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_045947 {REF} {Length: 3505} {TRANSSPLICED} {Pfam: PTB domain (IRS-1 type) [PF02174.19, score=42.9]; PH domain [PF00169.31, score=27.3]} {Human: ENSG00000185950, IRS2, insulin receptor substrate 2, [RH, Score=69.3, Expect=2e-11]} {Mouse: ENSMUSG00000038894, Irs2, insulin receptor substrate 2, [RH, Score=64.7, Expect=4e-10]; ENSMUSG00000055980, Irs1, insulin receptor substrate 1, [RH, Score=63.5, Expect=7e-10]} {RNA1509_44686} {RNA1310_3305.1, RNA1509_44686} {RNA1509_44686, RNA815_950.1} Mlig455_045975 {REF} {Length: 3466} {TRANSSPLICED} {Pfam: PTB domain (IRS-1 type) [PF02174.19, score=42.9]; PH domain [PF00169.31, score=27.4]} {Human: ENSG00000185950, IRS2, insulin receptor substrate 2, [RH, Score=69.3, Expect=2e-11]} {Mouse: ENSMUSG00000038894, Irs2, insulin receptor substrate 2, [RH, Score=64.7, Expect=3e-10]; ENSMUSG00000055980, Irs1, insulin receptor substrate 1, [RH, Score=63.9, Expect=6e-10]} {RNA1509_44686, RNA1509_6919} {RNA1310_3305.1, RNA1509_6919} {RNA1509_6919, RNA815_950.1}
2.	MligTC455_25279	610	12.7	Mlig455_064543	Neo: - Age: - Region-enriched R4: 1.945/0.01155	RPGR	1.705	-	-	0.744	-	-	0.961	Mlig455_064543 {REF} {Length: 4078} {Pfam: Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=192.9]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=127.6]; Family of unknown function (DUF6476) [PF20082.1, score=19.1]} {Human: ENSG00000156313, RPGR, retinitis pigmentosa GTPase regulator, [RH, Score=229, Expect=6e-66]} {Mouse: ENSMUSG00000031174, Rpgr, retinitis pigmentosa GTPase regulator, [Score=234, Expect=1e-65]} {Dmel: FBgn0035207, Sherpa, SUMO-related HECT domain and RCC repeat protein for Toll pathway activation, [Score=142, Expect=2e-34]} {Celegans: WBGene00021685, herc-1, HECT and RCC domain E3 ubiquitin ligase, [Score=107, Expect=2e-23]} {Smed: dd_Smed_v6_2716_1_1, dd_Smed_v6_2716_1_1, [RH, Score=219, Expect=1e-61]} {RNA1509_14742} {RNA1310_2996, RNA1509_14742} {RNA1509_14742, RNA815_7565}
3.	MligTC455_27410	603	12.56	Mlig455_013566	Neo: - Age: Up-Down-Down	TLN1	1.654	-	0.702	-	-	-	0.952	Mlig455_013566 {REF} {Length: 10246} {TRANSSPLICED} {Pfam: I/LWEQ domain [PF01608.19, score=164.8]; Talin, middle domain [PF09141.12, score=97.7]; FERM central domain [PF00373.20, score=81.2]; N-terminal or F0 domain of Talin-head FERM [PF16511.7, score=60.4]; FERM N-terminal domain [PF09379.12, score=33.3]; Vinculin Binding Site [PF08913.12, score=27.1]} {Human: ENSG00000137076, TLN1, talin 1, [Score=1312, Expect=0.0]; ENSG00000171914, TLN2, talin 2, [Score=1251, Expect=0.0]} {Mouse: ENSMUSG00000028465, Tln1, talin 1, [Score=1306, Expect=0.0]; ENSMUSG00000052698, Tln2, talin 2, [Score=1246, Expect=0.0]} {Dmel: FBgn0260442, rhea, [RH, Score=1122, Expect=0.0]} {Celegans: WBGene00006771, tln-1, TaLiN; Talin, [RH, Score=567, Expect=7e-164]} {Smed: dd_Smed_v6_876_0_2, dd_Smed_v6_876_0_2, [RH, Score=929, Expect=0.0]} {RNA1509_2022} {RNA1310_318} {RNA815_75.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_53620

848

17.67

Mlig455_045947, Mlig455_045975

Neo: -

Age: -

IRS2

1.000

MligTC455_25279

610

12.7

Mlig455_064543

Neo: -

Age: -

Region-enriched R4: 1.945/0.01155

RPGR

1.705

0.744

0.961

Mlig455_064543 {REF} {Length: 4078} {Pfam: Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=192.9]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=127.6]; Family of unknown function (DUF6476) [PF20082.1, score=19.1]} {Human: ENSG00000156313, RPGR, retinitis pigmentosa GTPase regulator, [RH, Score=229, Expect=6e-66]} {Mouse: ENSMUSG00000031174, Rpgr, retinitis pigmentosa GTPase regulator, [Score=234, Expect=1e-65]} {Dmel: FBgn0035207, Sherpa, SUMO-related HECT domain and RCC repeat protein for Toll pathway activation, [Score=142, Expect=2e-34]} {Celegans: WBGene00021685, herc-1, HECT and RCC domain E3 ubiquitin ligase, [Score=107, Expect=2e-23]} {Smed: dd_Smed_v6_2716_1_1, dd_Smed_v6_2716_1_1, [RH, Score=219, Expect=1e-61]} {RNA1509_14742} {RNA1310_2996, RNA1509_14742} {RNA1509_14742, RNA815_7565}

MligTC455_27410

603

12.56

Mlig455_013566

Neo: -

Age: Up-Down-Down

TLN1

1.654

0.702

0.952

Mlig455_013566 {REF} {Length: 10246} {TRANSSPLICED} {Pfam: I/LWEQ domain [PF01608.19, score=164.8]; Talin, middle domain [PF09141.12, score=97.7]; FERM central domain [PF00373.20, score=81.2]; N-terminal or F0 domain of Talin-head FERM [PF16511.7, score=60.4]; FERM N-terminal domain [PF09379.12, score=33.3]; Vinculin Binding Site [PF08913.12, score=27.1]} {Human: ENSG00000137076, TLN1, talin 1, [Score=1312, Expect=0.0]; ENSG00000171914, TLN2, talin 2, [Score=1251, Expect=0.0]} {Mouse: ENSMUSG00000028465, Tln1, talin 1, [Score=1306, Expect=0.0]; ENSMUSG00000052698, Tln2, talin 2, [Score=1246, Expect=0.0]} {Dmel: FBgn0260442, rhea, [RH, Score=1122, Expect=0.0]} {Celegans: WBGene00006771, tln-1, TaLiN; Talin, [RH, Score=567, Expect=7e-164]} {Smed: dd_Smed_v6_876_0_2, dd_Smed_v6_876_0_2, [RH, Score=929, Expect=0.0]} {RNA1509_2022} {RNA1310_318} {RNA815_75.1}