Data search


search
Exact
Search

Results for MligTC455_53647

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_53647 4054 84.45 Mlig455_006556, Mlig455_006719

Neo: -

Age: logFC(26M/2M)=0.317

Region-enriched R3: 1.006/0.04022

SCARB1

Mlig455_006556 {REF} {Length: 3088} {Pfam: CD36 family [PF01130.23, score=405.9]} {Human: ENSG00000073060, SCARB1, scavenger receptor class B member 1, [RH, Score=251, Expect=1e-76]} {Mouse: ENSMUSG00000037936, Scarb1, scavenger receptor class B, member 1, [RH, Score=241, Expect=6e-73]} {Dmel: FBgn0015924, crq, croquemort, [RH, Score=186, Expect=1e-52]} {Celegans: WBGene00013039, scav-3, SCAVenger receptor (CD36 family) related, [Score=157, Expect=7e-42]} {Smed: dd_Smed_v6_2951_0_1, dd_Smed_v6_2951_0_1, [Score=287, Expect=1e-90]} {RNA1509_13640, RNA1509_35231} {RNA1310_6728, RNA1509_13640} {RNA1509_13640, RNA815_5820}

Mlig455_006719 {REF} {Length: 2951} {TRANSSPLICED} {Pfam: CD36 family [PF01130.23, score=403.4]} {Human: ENSG00000073060, SCARB1, scavenger receptor class B member 1, [RH, Score=253, Expect=4e-77]} {Mouse: ENSMUSG00000037936, Scarb1, scavenger receptor class B, member 1, [RH, Score=241, Expect=6e-73]} {Dmel: FBgn0025697, santa-maria, scavenger receptor acting in neural tissue and majority of rhodopsin is absent, [RH, Score=187, Expect=2e-52]} {Celegans: WBGene00013039, scav-3, SCAVenger receptor (CD36 family) related, [Score=159, Expect=2e-42]} {Smed: dd_Smed_v6_2951_0_1, dd_Smed_v6_2951_0_1, [Score=290, Expect=1e-91]} {RNA1509_24770, RNA1509_35231} {RNA1310_6728, RNA1509_24770, RNA1509_35231} {RNA1509_24770, RNA1509_35231, RNA815_5820}

Cumulative graph for MligTC455_53647

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.095 6.544 0.08465 0.63284
RegionR2 -0.708 6.544 0.08150 0.34984
RegionR3 1.006 6.544 0.00150 0.04022
RegionR4 0.872 6.544 0.02037 0.10358
RegionR5 0.715 6.544 0.02283 0.10649
RegionR6 0.504 6.544 0.12604 0.64458
RegionR7 -0.529 6.544 0.16532 0.75014
RegionR8 -0.764 6.544 0.09814 0.58988

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.158 6.544 0.84745 1.00000
RegenerationR2 -0.027 6.544 0.94871 1.00000
RegenerationR3 -0.214 6.544 0.60683 0.91131
RegenerationR4 -0.144 6.544 0.73624 0.96647
RegenerationR5 -0.164 6.544 0.68747 0.94691
RegenerationR6 -0.414 6.544 0.32282 0.66910
RegenerationBL -0.572 6.544 0.16856 0.49220
RegenerationTP 0.85 6.544 0.05006 0.36720


Genes with expression patterns similar to MligTC455_53647

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_53647 4054 84.45 Mlig455_006556, Mlig455_006719

Neo: -

Age: logFC(26M/2M)=0.317

Region-enriched R3: 1.006/0.04022

SCARB1 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_006556 {REF} {Length: 3088} {Pfam: CD36 family [PF01130.23, score=405.9]} {Human: ENSG00000073060, SCARB1, scavenger receptor class B member 1, [RH, Score=251, Expect=1e-76]} {Mouse: ENSMUSG00000037936, Scarb1, scavenger receptor class B, member 1, [RH, Score=241, Expect=6e-73]} {Dmel: FBgn0015924, crq, croquemort, [RH, Score=186, Expect=1e-52]} {Celegans: WBGene00013039, scav-3, SCAVenger receptor (CD36 family) related, [Score=157, Expect=7e-42]} {Smed: dd_Smed_v6_2951_0_1, dd_Smed_v6_2951_0_1, [Score=287, Expect=1e-90]} {RNA1509_13640, RNA1509_35231} {RNA1310_6728, RNA1509_13640} {RNA1509_13640, RNA815_5820}

Mlig455_006719 {REF} {Length: 2951} {TRANSSPLICED} {Pfam: CD36 family [PF01130.23, score=403.4]} {Human: ENSG00000073060, SCARB1, scavenger receptor class B member 1, [RH, Score=253, Expect=4e-77]} {Mouse: ENSMUSG00000037936, Scarb1, scavenger receptor class B, member 1, [RH, Score=241, Expect=6e-73]} {Dmel: FBgn0025697, santa-maria, scavenger receptor acting in neural tissue and majority of rhodopsin is absent, [RH, Score=187, Expect=2e-52]} {Celegans: WBGene00013039, scav-3, SCAVenger receptor (CD36 family) related, [Score=159, Expect=2e-42]} {Smed: dd_Smed_v6_2951_0_1, dd_Smed_v6_2951_0_1, [Score=290, Expect=1e-91]} {RNA1509_24770, RNA1509_35231} {RNA1310_6728, RNA1509_24770, RNA1509_35231} {RNA1509_24770, RNA1509_35231, RNA815_5820}
2. MligTC455_53646 1106 23.04 Mlig455_006669

Neo: -

Age: -

SCARB1 3.789 0.988 0.964 - 0.907 0.930 - Mlig455_006669 {REF} {Length: 3119} {Pfam: CD36 family [PF01130.23, score=403.5]} {Human: ENSG00000073060, SCARB1, scavenger receptor class B member 1, [RH, Score=253, Expect=3e-77]} {Mouse: ENSMUSG00000037936, Scarb1, scavenger receptor class B, member 1, [RH, Score=242, Expect=4e-73]} {Dmel: FBgn0025697, santa-maria, scavenger receptor acting in neural tissue and majority of rhodopsin is absent, [RH, Score=188, Expect=1e-52]} {Celegans: WBGene00013039, scav-3, SCAVenger receptor (CD36 family) related, [Score=160, Expect=1e-42]} {Smed: dd_Smed_v6_2951_0_1, dd_Smed_v6_2951_0_1, [Score=290, Expect=7e-92]} {RNA1509_47452, RNA1509_53880, RNA1509_5907} {RNA1310_6728, RNA1509_47452, RNA1509_53880, RNA1509_5907} {RNA1509_47452, RNA1509_53880, RNA1509_5907, RNA815_5820}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA