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Results for MligTC455_53710

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_53710 1202 25.05 Mlig455_064316

Neo: -

Age: logFC(26M/2M)=0.222

 TARDBP Mlig455_064316 {REF} {Length: 1435} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=62.8]} {Human: ENSG00000120948, TARDBP, TAR DNA binding protein, [Score=130, Expect=2e-35]; ENSG00000277726, AL109811.4, novel protein, [Score=128, Expect=2e-35]} {Mouse: ENSMUSG00000041459, Tardbp, TAR DNA binding protein, [Score=130, Expect=3e-36]} {Dmel: FBgn0025790, TBPH, TAR DNA-binding protein-43 homolog, [Score=118, Expect=1e-30]} {Celegans: WBGene00006514, tdp-1, Tar DNA-binding protein homolog 1, [Score=85.5, Expect=4e-19]} {Smed: dd_Smed_v6_3328_0_1, dd_Smed_v6_3328_0_1, [Score=122, Expect=2e-32]} {RNA1509_16508, RNA1509_25426, RNA1509_37776} {RNA1310_25239, RNA1509_25426, RNA1509_37776} {RNA1509_25426, RNA1509_37776, RNA815_4172.1}

Cumulative graph for MligTC455_53710

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 1.086 4.774 0.23499 0.87884
RegionR2 -0.536 4.774 0.35823 0.75285
RegionR3 -0.1 4.774 0.83746 1.00000
RegionR4 0.554 4.774 0.30794 0.62195
RegionR5 -0.225 4.774 0.63020 0.98330
RegionR6 -0.358 4.774 0.47058 1.00000
RegionR7 -0.19 4.774 0.73270 1.00000
RegionR8 -0.231 4.774 0.73242 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.311 4.774 0.31854 1.00000
RegenerationR2 0.163 4.774 0.77591 0.98222
RegenerationR3 0.387 4.774 0.51521 0.86448
RegenerationR4 -0.143 4.774 0.80802 0.98884
RegenerationR5 0.388 4.774 0.49973 0.85830
RegenerationR6 0.9 4.774 0.13830 0.45612
RegenerationBL 1.308 4.774 0.01817 0.14464
RegenerationTP -0.014 4.774 0.98239 1.00000


Genes with expression patterns similar to MligTC455_53710

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_53710 1202 25.05 Mlig455_064316

Neo: -

Age: logFC(26M/2M)=0.222

 TARDBP 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_064316 {REF} {Length: 1435} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=62.8]} {Human: ENSG00000120948, TARDBP, TAR DNA binding protein, [Score=130, Expect=2e-35]; ENSG00000277726, AL109811.4, novel protein, [Score=128, Expect=2e-35]} {Mouse: ENSMUSG00000041459, Tardbp, TAR DNA binding protein, [Score=130, Expect=3e-36]} {Dmel: FBgn0025790, TBPH, TAR DNA-binding protein-43 homolog, [Score=118, Expect=1e-30]} {Celegans: WBGene00006514, tdp-1, Tar DNA-binding protein homolog 1, [Score=85.5, Expect=4e-19]} {Smed: dd_Smed_v6_3328_0_1, dd_Smed_v6_3328_0_1, [Score=122, Expect=2e-32]} {RNA1509_16508, RNA1509_25426, RNA1509_37776} {RNA1310_25239, RNA1509_25426, RNA1509_37776} {RNA1509_25426, RNA1509_37776, RNA815_4172.1}
2. MligTC455_33864 926 19.29 Mlig455_064384

Neo: -

Age: -

 0.967 - - - 0.967 - - Mlig455_064384 {REF} {Length: 1471} {NoTransDecoderORF} {RNA1509_32249} {RNA1310_11694.1} {RNA815_10459}
3. MligTC455_33863 1988 41.42 Mlig455_025793, Mlig455_064361

Neo: -

Age: -

 BTRC 0.958 - - - 0.958 - -

Mlig455_025793 {REF} {Length: 5618} {Pfam: WD domain, G-beta repeat [PF00400.34, score=130.3]; D domain of beta-TrCP [PF12125.10, score=62.3]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=38.2]; F-box-like [PF12937.9, score=37.5]; Nucleoporin Nup120/160 [PF11715.10, score=26.5]; WD40-like domain [PF17005.7, score=22.7]} {Human: ENSG00000166167, BTRC, beta-transducin repeat containing E3 ubiquitin protein ligase, [RH, Score=735, Expect=0.0]; ENSG00000072803, FBXW11, F-box and WD repeat domain containing 11, [RH, Score=714, Expect=0.0]} {Mouse: ENSMUSG00000025217, Btrc, beta-transducin repeat containing protein, [RH, Score=733, Expect=0.0]; ENSMUSG00000020271, Fbxw11, F-box and WD-40 domain protein 11, [RH, Score=716, Expect=0.0]} {Dmel: FBgn0283468, slmb, supernumerary limbs, [RH, Score=742, Expect=0.0]} {Celegans: WBGene00003009, lin-23, F-box/WD repeat-containing protein lin-23, [RH, Score=632, Expect=0.0]} {Smed: dd_Smed_v6_3757_0_1, dd_Smed_v6_3757_0_1, [RH, Score=604, Expect=0.0]} {RNA1509_11648, RNA1509_26322, RNA1509_3057, RNA1509_42851, RNA1509_48589} {RNA1310_10361.1, RNA1509_11648, RNA1509_26322, RNA1509_42851, RNA1509_48589} {RNA1509_11648, RNA1509_26322, RNA1509_42851, RNA1509_48589, RNA815_3571}

Mlig455_064361 {REF} {Length: 5860} {Pfam: WD domain, G-beta repeat [PF00400.34, score=130.3]; D domain of beta-TrCP [PF12125.10, score=62.3]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=38.2]; F-box-like [PF12937.9, score=37.5]; Nucleoporin Nup120/160 [PF11715.10, score=26.5]; WD40-like domain [PF17005.7, score=22.7]} {Human: ENSG00000166167, BTRC, beta-transducin repeat containing E3 ubiquitin protein ligase, [RH, Score=735, Expect=0.0]; ENSG00000072803, FBXW11, F-box and WD repeat domain containing 11, [RH, Score=715, Expect=0.0]} {Mouse: ENSMUSG00000025217, Btrc, beta-transducin repeat containing protein, [RH, Score=734, Expect=0.0]; ENSMUSG00000020271, Fbxw11, F-box and WD-40 domain protein 11, [RH, Score=717, Expect=0.0]} {Dmel: FBgn0283468, slmb, supernumerary limbs, [RH, Score=743, Expect=0.0]} {Celegans: WBGene00003009, lin-23, F-box/WD repeat-containing protein lin-23, [RH, Score=632, Expect=0.0]} {Smed: dd_Smed_v6_3757_0_1, dd_Smed_v6_3757_0_1, [RH, Score=604, Expect=0.0]} {RNA1509_14454, RNA1509_3057, RNA1509_32249} {RNA1310_10361.1, RNA1509_14454, RNA1509_3057, RNA1509_32249} {RNA1509_14454, RNA1509_3057, RNA1509_32249, RNA815_3571}
4. MligTC455_44730 249 5.19 Mlig455_056276

Neo: Int S/G2/M

Age: -

 CLCN3 0.957 - - - 0.957 - - Mlig455_056276 {REF} {Length: 9368} {TRANSSPLICED} {Pfam: Voltage gated chloride channel [PF00654.22, score=316.6]; Tetratricopeptide repeat [PF07719.19, score=27.2]; CBS domain [PF00571.30, score=23.2]; Tetratricopeptide repeat [PF00515.30, score=21.4]} {Human: ENSG00000109572, CLCN3, chloride voltage-gated channel 3, [Score=876, Expect=0.0]; ENSG00000073464, CLCN4, chloride voltage-gated channel 4, [Score=868, Expect=0.0]; ENSG00000171365, CLCN5, chloride voltage-gated channel 5, [Score=852, Expect=0.0]} {Mouse: ENSMUSG00000004319, Clcn3, chloride channel, voltage-sensitive 3, [Score=876, Expect=0.0]; ENSMUSG00000000605, Clcn4, chloride channel, voltage-sensitive 4, [Score=862, Expect=0.0]; ENSMUSG00000004317, Clcn5, chloride channel, voltage-sensitive 5, [Score=853, Expect=0.0]} {Dmel: FBgn0036566, ClC-c, Chloride channel-c, [RH, Score=868, Expect=0.0]} {Celegans: WBGene00000532, clh-5, Chloride channel protein, [RH, Score=737, Expect=0.0]} {Smed: dd_Smed_v6_4076_1_1, dd_Smed_v6_4076_1_1, [Score=781, Expect=0.0]} {RNA1509_12600, RNA1509_18041, RNA1509_30316} {RNA1310_3875, RNA1509_18041, RNA1509_30316} {RNA1509_18041, RNA1509_30316, RNA815_996.1}

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