TomoSeq data search

Data search

Results for MligTC455_53750

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_53750

1899

39.56

Mlig455_010063

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.373

Region-enriched R4: 1.149/0.02473

VDAC2

Mlig455_010063 {REF} {Length: 1448} {TRANSSPLICED} {Pfam: Eukaryotic porin [PF01459.24, score=182.6]} {Human: ENSG00000165637, VDAC2, voltage dependent anion channel 2, [Score=224, Expect=4e-72]; ENSG00000213585, VDAC1, voltage dependent anion channel 1, [Score=224, Expect=6e-72]} {Mouse: ENSMUSG00000021771, Vdac2, voltage-dependent anion channel 2, [Score=224, Expect=6e-72]; ENSMUSG00000020402, Vdac1, voltage-dependent anion channel 1, [Score=222, Expect=2e-71]} {Dmel: FBgn0004363, porin, [Score=212, Expect=8e-68]} {Celegans: WBGene00019900, vdac-1, Probable voltage-dependent anion-selective channel, [Score=157, Expect=2e-46]} {Smed: dd_Smed_v6_738_0_1, dd_Smed_v6_738_0_1, [Score=155, Expect=1e-45]} {RNA1509_1867, RNA1509_19910} {RNA1310_5610.1, RNA1509_1867, RNA1509_19910} {RNA1509_1867, RNA1509_19910, RNA815_9692}

Cumulative graph for MligTC455_53750

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.322	5.537	0.14871	0.76297
RegionR2	0.267	5.537	0.51052	0.88825
RegionR3	0.197	5.537	0.56255	1.00000
RegionR4	1.149	5.537	0.00304	0.02473
RegionR5	0.221	5.537	0.50008	0.86303
RegionR6	0.126	5.537	0.72004	1.00000
RegionR7	-0.493	5.537	0.26795	0.89848
RegionR8	-0.144	5.537	0.77492	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.771	5.537	0.60214	1.00000
RegenerationR2	0.478	5.537	0.19005	0.63386
RegenerationR3	0.612	5.537	0.12341	0.54353
RegenerationR4	0.166	5.537	0.68762	0.94832
RegenerationR5	0.726	5.537	0.05875	0.38612
RegenerationR6	0.666	5.537	0.09544	0.38431
RegenerationBL	0.671	5.537	0.09020	0.35185
RegenerationTP	1.364	5.537	0.00132	0.05607

Genes with expression patterns similar to MligTC455_53750

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_53750	1899	39.56	Mlig455_010063	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.373 Region-enriched R4: 1.149/0.02473	VDAC2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_010063 {REF} {Length: 1448} {TRANSSPLICED} {Pfam: Eukaryotic porin [PF01459.24, score=182.6]} {Human: ENSG00000165637, VDAC2, voltage dependent anion channel 2, [Score=224, Expect=4e-72]; ENSG00000213585, VDAC1, voltage dependent anion channel 1, [Score=224, Expect=6e-72]} {Mouse: ENSMUSG00000021771, Vdac2, voltage-dependent anion channel 2, [Score=224, Expect=6e-72]; ENSMUSG00000020402, Vdac1, voltage-dependent anion channel 1, [Score=222, Expect=2e-71]} {Dmel: FBgn0004363, porin, [Score=212, Expect=8e-68]} {Celegans: WBGene00019900, vdac-1, Probable voltage-dependent anion-selective channel, [Score=157, Expect=2e-46]} {Smed: dd_Smed_v6_738_0_1, dd_Smed_v6_738_0_1, [Score=155, Expect=1e-45]} {RNA1509_1867, RNA1509_19910} {RNA1310_5610.1, RNA1509_1867, RNA1509_19910} {RNA1509_1867, RNA1509_19910, RNA815_9692}
2.	MligTC455_53751	3101	64.6	Mlig455_010021, Mlig455_063258	Neo: - Age: logFC(26M/2M)=0.602 Regeneration-upregulated BL: 1.302 Regeneration-enriched BL: 1.302	VDAC2	4.371	0.778	0.960	-	0.877	0.848	0.908	Mlig455_010021 {REF} {Length: 1452} {TRANSSPLICED} {Pfam: Eukaryotic porin [PF01459.24, score=181.9]} {Human: ENSG00000165637, VDAC2, voltage dependent anion channel 2, [Score=224, Expect=7e-72]; ENSG00000213585, VDAC1, voltage dependent anion channel 1, [Score=223, Expect=1e-71]} {Mouse: ENSMUSG00000021771, Vdac2, voltage-dependent anion channel 2, [Score=223, Expect=6e-72]; ENSMUSG00000020402, Vdac1, voltage-dependent anion channel 1, [Score=221, Expect=3e-71]} {Dmel: FBgn0004363, porin, [Score=212, Expect=1e-67]} {Celegans: WBGene00019900, vdac-1, Probable voltage-dependent anion-selective channel, [Score=158, Expect=8e-47]} {Smed: dd_Smed_v6_738_0_1, dd_Smed_v6_738_0_1, [Score=155, Expect=1e-45]} {RNA1509_19910, RNA1509_33070} {RNA1310_5610.1, RNA1509_33070} {RNA1509_33070, RNA815_9692} Mlig455_063258 {REF} {Length: 1449} {TRANSSPLICED} {Pfam: Eukaryotic porin [PF01459.24, score=181.9]} {Human: ENSG00000165637, VDAC2, voltage dependent anion channel 2, [Score=224, Expect=7e-72]; ENSG00000213585, VDAC1, voltage dependent anion channel 1, [Score=223, Expect=1e-71]} {Mouse: ENSMUSG00000021771, Vdac2, voltage-dependent anion channel 2, [Score=223, Expect=6e-72]; ENSMUSG00000020402, Vdac1, voltage-dependent anion channel 1, [Score=221, Expect=3e-71]} {Dmel: FBgn0004363, porin, [Score=212, Expect=1e-67]} {Celegans: WBGene00019900, vdac-1, Probable voltage-dependent anion-selective channel, [Score=158, Expect=8e-47]} {Smed: dd_Smed_v6_738_0_1, dd_Smed_v6_738_0_1, [Score=155, Expect=1e-45]} {RNA1509_19910} {RNA1310_5610.1} {RNA815_9692}
3.	MligTC455_02982	496	10.34	Mlig455_021516	Neo: Int S/G2/M Age: Down-Up-Up	MRPL55	2.451	-	-	-	0.754	0.953	0.744	Mlig455_021516 {REF} {Length: 892} {TRANSSPLICED} {Pfam: Mitochondrial ribosomal protein L55 [PF09776.11, score=84.4]} {Human: ENSG00000162910, MRPL55, mitochondrial ribosomal protein L55, [RH, Score=63.2, Expect=3e-13]} {Mouse: ENSMUSG00000036860, Mrpl55, mitochondrial ribosomal protein L55, [RH, Score=62.8, Expect=2e-13]} {Dmel: FBgn0038678, mRpL55, mitochondrial ribosomal protein L55, [RH, Score=68.2, Expect=8e-16]} {Celegans: WBGene00022045, mrpl-55, Mitochondrial Ribosomal Protein, Large, [RH, Score=69.7, Expect=3e-16]} {Smed: dd_Smed_v6_4982_0_1, dd_Smed_v6_4982_0_1, [RH, Score=54.7, Expect=1e-10]} {RNA1509_8283} {RNA1310_15061} {RNA815_18521}
4.	MligTC455_50524	2187	45.56	Mlig455_033433	Neo: - Age: -		1.764	-	-	-	-	0.962	0.802	Mlig455_033433 {REF} {Length: 2629} {TRANSSPLICED} {RNA1509_42290} {RNA1310_15125} {RNA815_19799}
5.	MligTC455_02981	502	10.46	Mlig455_021254	Neo: - Age: - Region-enriched R5: 1.023/0.01867	MRPL55	1.707	-	-	-	0.754	0.953	-	Mlig455_021254 {REF} {Length: 901} {TRANSSPLICED} {Pfam: Mitochondrial ribosomal protein L55 [PF09776.11, score=84.4]} {Human: ENSG00000162910, MRPL55, mitochondrial ribosomal protein L55, [RH, Score=63.5, Expect=2e-13]} {Mouse: ENSMUSG00000036860, Mrpl55, mitochondrial ribosomal protein L55, [RH, Score=63.2, Expect=2e-13]} {Dmel: FBgn0038678, mRpL55, mitochondrial ribosomal protein L55, [RH, Score=68.6, Expect=7e-16]} {Celegans: WBGene00022045, mrpl-55, Mitochondrial Ribosomal Protein, Large, [RH, Score=69.7, Expect=3e-16]} {Smed: dd_Smed_v6_4982_0_1, dd_Smed_v6_4982_0_1, [RH, Score=55.1, Expect=9e-11]} {RNA1509_8283} {RNA1310_15061, RNA1509_8283} {RNA1509_8283, RNA815_18521}
6.	MligTC455_42965	425	8.85	Mlig455_053567	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.299	SPATA6L	1.695	-	-	-	-	0.953	0.742	Mlig455_053567 {REF} {Length: 2164} {TRANSSPLICED} {Pfam: Spermatogenesis-assoc protein 6 [PF14909.8, score=127.3]} {Human: ENSG00000106686, SPATA6L, spermatogenesis associated 6 like, [RH, Score=96.7, Expect=5e-22]} {Mouse: ENSMUSG00000064202, 4430402I18Rik, RIKEN cDNA 4430402I18 gene, [RH, Score=98.6, Expect=3e-22]} {Smed: dd_Smed_v6_10543_0_1, dd_Smed_v6_10543_0_1, [RH, Score=191, Expect=2e-57]} {RNA1509_23645} {RNA1310_24559} {RNA815_31401}
7.	MligTC455_17382	684	14.24	Mlig455_002490, Mlig455_002676	Neo: - Age: -		0.953	-	-	-	-	0.953	-	Mlig455_002490 {REF} {Length: 3902} {TRANSSPLICED} {RNA1509_15079} {RNA1310_11437} {RNA815_14047} Mlig455_002676 {REF} {Length: 3894} {TRANSSPLICED} {RNA1509_15079, RNA1509_22825} {RNA1310_11437, RNA1509_15079, RNA1509_22825} {RNA1509_15079, RNA1509_22825, RNA815_14047}
8.	MligTC455_25134	2209	46.03	Mlig455_061897	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.237		0.951	-	-	-	-	-	0.951	Mlig455_061897 {REF} {Length: 3533} {Pfam: BRICHOS domain [PF04089.16, score=21.8]} {RNA1509_20130, RNA1509_5762} {RNA1310_7129.1, RNA1509_20130, RNA1509_5762} {RNA1509_20130, RNA1509_5762, RNA815_2628}

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