TomoSeq data search

Data search

Results for MligTC455_53781

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_53781

326

6.78

Mlig455_034989

Neo: -

Age: -

CEP164

Mlig455_034989 {REF} {Length: 5017} {TRANSSPLICED} {Pfam: WW domain [PF00397.28, score=30.4]} {Human: ENSG00000110274, CEP164, centrosomal protein 164, [RH, Score=136, Expect=3e-32]} {Mouse: ENSMUSG00000043987, Cep164, centrosomal protein 164, [RH, Score=129, Expect=3e-30]} {Dmel: FBgn0030716, CG9170, [RH, Score=90.1, Expect=3e-18]} {Smed: dd_Smed_v6_12228_0_1, dd_Smed_v6_12228_0_1, [Score=118, Expect=2e-27]} {RNA1509_2250} {RNA1310_1110} {RNA815_824}

Cumulative graph for MligTC455_53781

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.371	3.126	0.85460	1.00000
RegionR2	0.151	3.126	0.84753	1.00000
RegionR3	-0.015	3.126	0.98572	1.00000
RegionR4	0.016	3.126	0.98623	1.00000
RegionR5	-0.699	3.126	0.32325	0.66578
RegionR6	-0.392	3.126	0.59434	1.00000
RegionR7	0.65	3.126	0.41930	1.00000
RegionR8	0.659	3.126	0.49427	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-5.1	3.126	0.40043	1.00000
RegenerationR2	1.097	3.126	0.09722	0.49513
RegenerationR3	0.839	3.126	0.26995	0.70421
RegenerationR4	0.912	3.126	0.25635	0.70443
RegenerationR5	0.974	3.126	0.19306	0.62425
RegenerationR6	-0.427	3.126	0.61809	0.87948
RegenerationBL	0.374	3.126	0.63580	0.97551
RegenerationTP	0.941	3.126	0.25230	0.70021

Genes with expression patterns similar to MligTC455_53781

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_53781	326	6.78	Mlig455_034989	Neo: - Age: -	CEP164	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_034989 {REF} {Length: 5017} {TRANSSPLICED} {Pfam: WW domain [PF00397.28, score=30.4]} {Human: ENSG00000110274, CEP164, centrosomal protein 164, [RH, Score=136, Expect=3e-32]} {Mouse: ENSMUSG00000043987, Cep164, centrosomal protein 164, [RH, Score=129, Expect=3e-30]} {Dmel: FBgn0030716, CG9170, [RH, Score=90.1, Expect=3e-18]} {Smed: dd_Smed_v6_12228_0_1, dd_Smed_v6_12228_0_1, [Score=118, Expect=2e-27]} {RNA1509_2250} {RNA1310_1110} {RNA815_824}
2.	MligTC455_29323	239	4.98	Mlig455_053598	Neo: - Age: -	NOTCH4	1.716	-	0.766	-	-	-	0.950	Mlig455_053598 {REF} {Length: 4886} {Pfam: EGF-like domain [PF00008.29, score=147.1]; Human growth factor-like EGF [PF12661.9, score=87.2]; Ankyrin repeats (3 copies) [PF12796.9, score=85.5]; Ankyrin repeats (many copies) [PF13857.8, score=77.4]; Ankyrin repeat [PF00023.32, score=64.8]; Ankyrin repeats (many copies) [PF13637.8, score=64.3]; Ankyrin repeat [PF13606.8, score=59.4]; LNR domain [PF00066.19, score=53.5]; EGF-like domain [PF07974.15, score=44.0]; Calcium-binding EGF domain [PF07645.17, score=31.7]} {Human: ENSG00000235396, NOTCH4, notch 4, [Score=312, Expect=1e-87]; ENSG00000206312, NOTCH4, notch 4, [Score=312, Expect=1e-87]; ENSG00000234876, NOTCH4, notch 4, [Score=311, Expect=1e-87]; ENSG00000223355, NOTCH4, notch 4, [Score=311, Expect=1e-87]; ENSG00000204301, NOTCH4, notch 4, [Score=311, Expect=1e-87]; ENSG00000232339, NOTCH4, notch 4, [Score=311, Expect=1e-87]; ENSG00000134250, NOTCH2, notch 2, [Score=309, Expect=1e-86]; ENSG00000238196, NOTCH4, notch 4, [Score=297, Expect=1e-84]} {Mouse: ENSMUSG00000027878, Notch2, notch 2, [Score=349, Expect=5e-100]} {Dmel: FBgn0004647, N, Notch, [Score=332, Expect=1e-94]} {Celegans: WBGene00003001, lin-12, [Score=240, Expect=6e-65]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=239, Expect=2e-64]} {RNA1509_20447, RNA1509_57909} {RNA1310_1718.1, RNA1509_57909} {RNA1509_57909, RNA815_12429}
3.	MligTC455_39148	1476	30.74	Mlig455_004637	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.321 Regeneration-downregulated R6: -1.480 Regeneration-depleted R6: -1.480	AF241726.2	1.686	-	-	-	0.725	-	0.961	Mlig455_004637 {REF} {Length: 2374} {Pfam: Tetraspanin family [PF00335.22, score=85.2]} {Human: ENSG00000250349, AF241726.2, novel proline rich Gla (G-carboxyglutamic acid) 1 (PRRG1) and tetraspanin 7 (TSPAN7) protein, [Score=65.5, Expect=1e-11]; ENSG00000156298, TSPAN7, tetraspanin 7, [Score=64.7, Expect=2e-11]} {Mouse: ENSMUSG00000058254, Tspan7, tetraspanin 7, [Score=66.6, Expect=2e-12]} {Dmel: FBgn0033629, Tsp47F, Tetraspanin 47F, [Score=61.2, Expect=1e-10]} {Smed: dd_Smed_v6_3175_0_1, dd_Smed_v6_3175_0_1, [Score=73.2, Expect=1e-14]} {RNA1509_14543, RNA1509_24222, RNA1509_33485, RNA1509_45568} {RNA1310_2151, RNA1509_14543, RNA1509_24222, RNA1509_33485, RNA1509_45568} {RNA1509_14543, RNA1509_24222, RNA1509_33485, RNA1509_45568, RNA815_585.1}
4.	MligTC455_30603	490	10.2	Mlig455_003054, Mlig455_003056, Mlig455_003261, Mlig455_062836	Neo: - Age: - Region-enriched R8: 2.986/0.01192		1.682	0.955	-	-	-	0.727	-	Mlig455_003054 {REF} {Length: 1974} {Pfam: WSC domain [PF01822.21, score=57.2]; PAN domain [PF00024.28, score=19.4]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=50.4, Expect=5e-07]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=64.3, Expect=1e-11]} {RNA1509_42596} {RNA1310_34394.1} {RNA815_21593} Mlig455_003056 {REF} {Length: 1862} {Pfam: WSC domain [PF01822.21, score=58.0]; PAN domain [PF00024.28, score=23.1]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=47.4, Expect=1e-05]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=59.3, Expect=1e-09]} {RNA1509_40708} {RNA1310_34394.2} {RNA815_21593} Mlig455_003261 {REF} {Length: 1089} {Pfam: WSC domain [PF01822.21, score=57.1]; PAN domain [PF00024.28, score=19.0]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=50.4, Expect=6e-07]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=64.3, Expect=1e-11]} {RNA1509_42596} {RNA1310_34394.1} {RNA815_21593} Mlig455_062836 {REF} {Length: 2466} {Pfam: WSC domain [PF01822.21, score=58.0]; PAN domain [PF00024.28, score=23.1]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=47.4, Expect=1e-05]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=59.3, Expect=1e-09]} {RNA1509_40708} {RNA1310_34394.2} {RNA815_21593}
5.	MligTC455_17958	490	10.21	Mlig455_068231	Neo: - Age: logFC(26M/2M)=-0.406	CCDC83	0.966	-	-	-	-	-	0.966	Mlig455_068231 {REF} {Length: 2825} {Pfam: Domain of unknown function (DUF4618) [PF15397.8, score=19.3]} {Human: ENSG00000150676, CCDC83, coiled-coil domain containing 83, [RH, Score=145, Expect=2e-38]} {Mouse: ENSMUSG00000030617, Ccdc83, coiled-coil domain containing 83, [RH, Score=130, Expect=2e-33]} {Smed: dd_Smed_v6_16528_0_1, dd_Smed_v6_16528_0_1, [RH, Score=96.7, Expect=7e-22]} {RNA1509_34307, RNA1509_49481} {RNA1310_7992.1, RNA1509_34307, RNA1509_49481} {RNA1509_34307, RNA1509_49481, RNA815_3361.1}
6.	MligTC455_13945	222	4.62	Mlig455_008055	Neo: - Age: logFC(26M/2M)=-0.728	SYT14	0.965	-	-	-	-	-	0.965	Mlig455_008055 {REF} {Length: 3788} {Pfam: C2 domain [PF00168.32, score=38.0]} {Human: ENSG00000143469, SYT14, synaptotagmin 14, [Score=133, Expect=5e-32]; ENSG00000139973, SYT16, synaptotagmin 16, [Score=129, Expect=2e-30]} {Mouse: ENSMUSG00000016200, Syt14, synaptotagmin XIV, [Score=134, Expect=7e-32]} {Dmel: FBgn0261086, Syt14, Synaptotagmin 14, [Score=109, Expect=2e-24]} {Smed: dd_Smed_v6_9548_0_2, dd_Smed_v6_9548_0_2, [Score=137, Expect=2e-34]} {RNA1509_12459} {RNA1310_670.1, RNA1509_12459} {RNA1509_12459, RNA815_9293}
7.	MligTC455_26403	211	4.39	Mlig455_042094	Neo: - Age: Down-Down-Up		0.96	0.960	-	-	-	-	-	Mlig455_042094 {REF} {Length: 2243} {TRANSSPLICED} {RNA1509_47973} {RNA1310_48875} {RNA815_24752}
8.	MligTC455_48494	599	12.48	Mlig455_014371	Neo: - Age: Up-Down-Down	UNC79	0.957	0.957	-	-	-	-	-	Mlig455_014371 {REF} {Length: 8900} {Pfam: Cation-channel complex subunit UNC-79 [PF14776.8, score=493.9]} {Human: ENSG00000276416, UNC79, unc-79 homolog, NALCN channel complex subunit, [RH, Score=454, Expect=5e-128]; ENSG00000133958, UNC79, unc-79 homolog, NALCN channel complex subunit, [RH, Score=454, Expect=5e-128]} {Mouse: ENSMUSG00000021198, Unc79, unc-79 homolog, [RH, Score=456, Expect=1e-128]} {Dmel: FBgn0038693, unc79, uncoordinated 79, [RH, Score=475, Expect=1e-134]} {Celegans: WBGene00006811, unc-79, Uncoordinated protein 79, [RH, Score=350, Expect=1e-96]} {Smed: dd_Smed_v6_6600_0_15, dd_Smed_v6_6600_0_15, [RH, Score=584, Expect=6e-170]} {RNA1509_10593} {RNA1310_930.1} {RNA815_1785.1}
9.	MligTC455_26115	162	3.37	Mlig455_009388	Neo: - Age: Up-Down-Up		0.95	0.950	-	-	-	-	-	Mlig455_009388 {REF} {Length: 3949} {RNA1509_28486} {RNA1310_24343.1} {RNA815_8096}

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