Data search
Results for MligTC455_53786
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_53786 | 669 | 13.93 | Mlig455_003454 | Neo: - Age: Down-Up-Down Region-enriched R2: 2.069/0.00414 |
Mlig455_003454 {REF} {Length: 1254} {NoTransDecoderORF} {RNA1509_14683} {RNA1310_53049} {RNA815_25868.1} |
Cumulative graph for MligTC455_53786
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.961 | 4.084 | 0.38040 | 1.00000 | |
| RegionR2 | 2.069 | 4.084 | 0.00010 | 0.00414 | |
| RegionR3 | 0.648 | 4.084 | 0.11905 | 0.59740 | |
| RegionR4 | -0.538 | 4.084 | 0.29781 | 0.61002 | |
| RegionR5 | -0.466 | 4.084 | 0.25937 | 0.57968 | |
| RegionR6 | 0.077 | 4.084 | 0.86089 | 1.00000 | |
| RegionR7 | -0.413 | 4.084 | 0.46505 | 1.00000 | |
| RegionR8 | -0.415 | 4.084 | 0.53347 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.649 | 4.084 | 0.28462 | 0.98374 | |
| RegenerationR2 | -0.233 | 4.084 | 0.60047 | 0.91571 | |
| RegenerationR3 | 0.332 | 4.084 | 0.52905 | 0.87114 | |
| RegenerationR4 | 0.509 | 4.084 | 0.35235 | 0.78196 | |
| RegenerationR5 | 0.593 | 4.084 | 0.25367 | 0.68658 | |
| RegenerationR6 | -0.125 | 4.084 | 0.82761 | 0.98980 | |
| RegenerationBL | 0.828 | 4.084 | 0.19273 | 0.52767 | |
| RegenerationTP | 1.605 | 4.084 | 0.01209 | 0.18688 |
Genes with expression patterns similar to MligTC455_53786
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_53786 | 669 | 13.93 | Mlig455_003454 | Neo: - Age: Down-Up-Down Region-enriched R2: 2.069/0.00414 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_003454 {REF} {Length: 1254} {NoTransDecoderORF} {RNA1509_14683} {RNA1310_53049} {RNA815_25868.1} | |
| 2. | MligTC455_19315 | 642 | 13.38 | Mlig455_031407 | Neo: - Age: - |
SNAP25 | 2.478 | - | 0.784 | 0.955 | - | - | 0.739 | Mlig455_031407 {REF} {Length: 5053} {Pfam: SNAP-25 family [PF00835.21, score=45.9]; Protein of unknown function DUF16 [PF01519.18, score=21.0]} {Human: ENSG00000132639, SNAP25, synaptosome associated protein 25, [Score=228, Expect=1e-75]} {Mouse: ENSMUSG00000027273, Snap25, synaptosomal-associated protein 25, [Score=228, Expect=8e-76]} {Dmel: FBgn0011288, Snap25, Synaptosomal-associated protein 25kDa, [Score=233, Expect=4e-78]} {Celegans: WBGene00004364, ric-4, Synaptosomal-associated protein, [Score=241, Expect=7e-81]} {Smed: dd_Smed_v6_3977_0_1, dd_Smed_v6_3977_0_1, [Score=279, Expect=3e-96]} {RNA1509_16884, RNA1509_35911, RNA1509_48429, RNA1509_49430} {RNA1310_12128, RNA1509_16884, RNA1509_35911, RNA1509_48429, RNA1509_49430} {RNA1509_16884, RNA1509_35911, RNA1509_48429, RNA1509_49430, RNA815_13559} |
| 3. | MligTC455_24261 | 90 | 1.87 | Mlig455_022408 | Neo: - Age: logFC(26M/2M)=-0.488 |
1.679 | - | - | - | - | 0.951 | 0.728 | Mlig455_022408 {REF} {Length: 2883} {Pfam: Dpy-30 motif [PF05186.15, score=36.5]} {RNA1509_44741} {RNA1310_10316, RNA1509_44741} {RNA1509_44741, RNA815_22683} | |
| 4. | MligTC455_50915 | 531 | 11.06 | Mlig455_028745 | Neo: - Age: Up-Down-Down Region-enriched R2: 2.109/0.02468 |
DNHD1 | 0.971 | - | - | - | - | - | 0.971 | Mlig455_028745 {REF} {Length: 14999} {TRANSSPLICED} {Pfam: Dynein heavy chain, N-terminal region 2 [PF08393.15, score=214.3]; Hydrolytic ATP binding site of dynein motor region [PF12774.9, score=113.4]; P-loop containing dynein motor region D4 [PF12780.9, score=60.1]; Microtubule-binding stalk of dynein motor [PF12777.9, score=55.6]; P-loop containing dynein motor region [PF12775.9, score=49.4]; Dynein heavy chain C-terminal domain [PF18199.3, score=44.7]; Dynein heavy chain AAA lid domain [PF17852.3, score=40.5]; AAA domain [PF13401.8, score=23.5]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=22.3]; Dynein heavy chain AAA lid domain [PF18198.3, score=22.0]; Protein of unknown function (DUF815) [PF05673.15, score=21.1]; AAA domain [PF13604.8, score=18.7]} {Human: ENSG00000179532, DNHD1, dynein heavy chain domain 1, [Score=157, Expect=4e-37]} {Mouse: ENSMUSG00000030882, Dnhd1, dynein heavy chain domain 1, [Score=249, Expect=8e-65]} {Dmel: FBgn0013811, Dhc62B, Dynein heavy chain at 62B, [Score=114, Expect=2e-24]} {Celegans: WBGene00000485, che-3, Cytoplasmic dynein 2 heavy chain 1, [Score=84.0, Expect=4e-15]} {Smed: dd_Smed_v6_8984_0_1, dd_Smed_v6_8984_0_1, [RH, Score=443, Expect=5e-124]} {RNA1509_1896} {RNA1310_31, RNA1509_1896} {RNA1509_1896, RNA815_1203} |
| 5. | MligTC455_34980 | 192 | 4 | Mlig455_030455 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.463 Region-enriched R7: 4.905/0.00001 |
0.964 | - | - | - | - | 0.964 | - | Mlig455_030455 {REF} {Length: 1764} {Pfam: Glycosyltransferase family 92 [PF01697.29, score=94.4]} {Dmel: FBgn0030443, CG12715, [RH, Score=102, Expect=2e-23]} {Celegans: WBGene00012941, Y47D3B.4, [Score=81.3, Expect=2e-16]} {Smed: dd_Smed_v6_5401_0_1, dd_Smed_v6_5401_0_1, [Score=88.6, Expect=6e-19]} {RNA1509_46243} {RNA1310_16593} {RNA815_4190.1} | |
| 6. | MligTC455_42996 | 1278 | 26.63 | Mlig455_063418, Mlig455_066633 | Neo: - Age: logFC(26M/2M)=-0.327 Region-enriched R2: 1.738/0.03767 |
DYRK2 | 0.961 | - | - | - | - | - | 0.961 | Mlig455_063418 {REF} {Length: 2420} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=193.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=85.6]; ABC1 atypical kinase-like domain [PF03109.18, score=24.3]; Phosphotransferase enzyme family [PF01636.25, score=22.4]; RIO1 family [PF01163.24, score=18.5]} {Human: ENSG00000127334, DYRK2, dual specificity tyrosine phosphorylation regulated kinase 2, [RH, Score=632, Expect=0.0]} {Mouse: ENSMUSG00000028630, Dyrk2, dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2, [RH, Score=633, Expect=0.0]} {Dmel: FBgn0027101, Dyrk3, Dual-specificity tyrosine phosphorylation-regulated kinase 3, [RH, Score=542, Expect=0.0]} {Celegans: WBGene00003150, mbk-2, Dual specificity tyrosine-phosphorylation-regulated kinase mbk-2, [RH, Score=577, Expect=0.0]} {Smed: dd_Smed_v6_10966_0_1, dd_Smed_v6_10966_0_1, [RH, Score=612, Expect=0.0]} {RNA1509_27355, RNA1509_7341} {RNA1310_9403, RNA1509_7341} {RNA1509_7341, RNA815_3107} Mlig455_066633 {REF} {Length: 2424} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=193.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=85.6]; ABC1 atypical kinase-like domain [PF03109.18, score=24.3]; Phosphotransferase enzyme family [PF01636.25, score=22.4]; RIO1 family [PF01163.24, score=18.5]} {Human: ENSG00000127334, DYRK2, dual specificity tyrosine phosphorylation regulated kinase 2, [RH, Score=632, Expect=0.0]} {Mouse: ENSMUSG00000028630, Dyrk2, dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2, [RH, Score=633, Expect=0.0]} {Dmel: FBgn0027101, Dyrk3, Dual-specificity tyrosine phosphorylation-regulated kinase 3, [RH, Score=542, Expect=0.0]} {Celegans: WBGene00003150, mbk-2, Dual specificity tyrosine-phosphorylation-regulated kinase mbk-2, [RH, Score=577, Expect=0.0]} {Smed: dd_Smed_v6_10966_0_1, dd_Smed_v6_10966_0_1, [RH, Score=612, Expect=0.0]} {RNA1509_18793, RNA1509_27355} {RNA1310_9403, RNA1509_18793, RNA1509_27355} {RNA1509_18793, RNA1509_27355, RNA815_3107} |
| 7. | MligTC455_42980 | 577 | 12.02 | Mlig455_001415 | Neo: Int S/G2/M Age: - |
0.958 | - | - | - | - | 0.958 | - | Mlig455_001415 {REF} {Length: 2216} {TRANSSPLICED} {Pfam: RF-1 domain [PF00472.22, score=19.6]} {Celegans: WBGene00019838, R02F2.9, [Score=66.6, Expect=4e-14]} {RNA1509_19536} {RNA1310_42964, RNA1509_19536} {RNA1509_19536, RNA815_18239} | |
| 8. | MligTC455_30750 | 2067 | 43.07 | Mlig455_051133, Mlig455_063036 | Neo: - |
0.953 | - | - | - | - | - | 0.953 | Mlig455_051133 {REF} {Length: 1343} {Pfam: Methyltransferase FkbM domain [PF05050.14, score=18.9]} {RNA1509_7841} {RNA1310_50281} {RNA815_3607} Mlig455_063036 {REF} {Length: 2534} {Smed: dd_Smed_v6_25359_0_1, dd_Smed_v6_25359_0_1, [Score=73.9, Expect=1e-14]} {RNA1509_31595, RNA1509_31688, RNA1509_7841} {RNA1310_29896, RNA1509_31595, RNA1509_31688, RNA1509_7841} {RNA1509_31595, RNA1509_31688, RNA1509_7841, RNA815_3607} |
|
| 9. | MligTC455_15569 | 487 | 10.15 | Mlig455_067138, Mlig455_068636 | Neo: - Age: - Region-enriched R2: 2.466/0.01939 |
0.952 | - | - | - | - | 0.952 | - | Mlig455_067138 {REF} {Length: 332} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_27678} {RNA1310_35433} {RNA815_11024.1} Mlig455_068636 {REF} {Length: 720} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_27678} {RNA1310_34530, RNA1509_27678} {RNA1509_27678, RNA815_11024.1} |
|
| 10. | MligTC455_35704 | 317 | 6.6 | Mlig455_043180 | Neo: - Age: logFC(26M/2M)=0.333 |
ECHDC3 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_043180 {REF} {Length: 2665} {TRANSSPLICED} {Pfam: Enoyl-CoA hydratase/isomerase [PF00378.22, score=177.1]; Enoyl-CoA hydratase/isomerase [PF16113.7, score=108.7]} {Human: ENSG00000134463, ECHDC3, enoyl-CoA hydratase domain containing 3, [RH, Score=262, Expect=4e-86]} {Mouse: ENSMUSG00000039063, Echdc3, enoyl Coenzyme A hydratase domain containing 3, [RH, Score=253, Expect=9e-83]} {Dmel: FBgn0034191, CG6984, [RH, Score=210, Expect=3e-66]} {Celegans: WBGene00001151, ech-2, Enoyl-CoA Hydratase, [RH, Score=204, Expect=7e-64]} {Smed: dd_Smed_v6_4330_0_1, dd_Smed_v6_4330_0_1, [RH, Score=237, Expect=6e-77]} {RNA1509_28384} {RNA1310_28620} {RNA815_15187} |
Berezikov Lab - 2020-2021 © ERIBA