Data search
Results for MligTC455_53823
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_53823 | 879 | 18.31 | Mlig455_019082 | Neo: - Age: - |
SMIM8 | Mlig455_019082 {REF} {Length: 2570} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4500) [PF14937.8, score=73.7]} {Human: ENSG00000111850, SMIM8, small integral membrane protein 8, [RH, Score=62.4, Expect=9e-14]} {Mouse: ENSMUSG00000028295, Smim8, small integral membrane protein 8, [RH, Score=62.4, Expect=5e-14]} {Dmel: FBgn0052448, CG32448, [RH, Score=55.1, Expect=3e-11]} {RNA1509_21101, RNA1509_30919, RNA1509_57322} {RNA1310_38626, RNA1509_21101, RNA1509_30919, RNA1509_57322} {RNA1509_21101, RNA1509_30919, RNA1509_57322, RNA815_38528} |
Cumulative graph for MligTC455_53823
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.358 | 4.505 | 0.70883 | 1.00000 | |
| RegionR2 | 0.341 | 4.505 | 0.45891 | 0.84598 | |
| RegionR3 | 0.239 | 4.505 | 0.50847 | 0.99770 | |
| RegionR4 | 0.596 | 4.505 | 0.13237 | 0.36892 | |
| RegionR5 | 0.997 | 4.505 | 0.00148 | 0.01383 | |
| RegionR6 | 0.363 | 4.505 | 0.33300 | 0.92102 | |
| RegionR7 | -0.757 | 4.505 | 0.15742 | 0.73331 | |
| RegionR8 | -1.422 | 4.505 | 0.05001 | 0.43882 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.168 | 4.505 | 0.46377 | 1.00000 | |
| RegenerationR2 | 0.195 | 4.505 | 0.60507 | 0.91751 | |
| RegenerationR3 | 0.624 | 4.505 | 0.13054 | 0.55385 | |
| RegenerationR4 | 0.182 | 4.505 | 0.65544 | 0.93555 | |
| RegenerationR5 | -0.065 | 4.505 | 0.86168 | 1.00000 | |
| RegenerationR6 | 0.528 | 4.505 | 0.19179 | 0.53053 | |
| RegenerationBL | 1.308 | 4.505 | 0.00761 | 0.08513 | |
| RegenerationTP | 0.501 | 4.505 | 0.44564 | 0.86476 |
Genes with expression patterns similar to MligTC455_53823
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_53823 | 879 | 18.31 | Mlig455_019082 | Neo: - Age: - |
SMIM8 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_019082 {REF} {Length: 2570} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4500) [PF14937.8, score=73.7]} {Human: ENSG00000111850, SMIM8, small integral membrane protein 8, [RH, Score=62.4, Expect=9e-14]} {Mouse: ENSMUSG00000028295, Smim8, small integral membrane protein 8, [RH, Score=62.4, Expect=5e-14]} {Dmel: FBgn0052448, CG32448, [RH, Score=55.1, Expect=3e-11]} {RNA1509_21101, RNA1509_30919, RNA1509_57322} {RNA1310_38626, RNA1509_21101, RNA1509_30919, RNA1509_57322} {RNA1509_21101, RNA1509_30919, RNA1509_57322, RNA815_38528} |
| 2. | MligTC455_31256 | 833 | 17.36 | Mlig455_016145 | Neo: - Age: logFC(26M/2M)=-0.568 |
STK3 | 1.79 | 0.833 | - | - | 0.957 | - | - | Mlig455_016145 {REF} {Length: 3516} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=230.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=175.9]; C terminal SARAH domain of Mst1 [PF11629.10, score=69.2]; ABC1 atypical kinase-like domain [PF03109.18, score=37.8]; Fungal protein kinase [PF17667.3, score=36.0]} {Human: ENSG00000104375, STK3, serine/threonine kinase 3, [RH, Score=553, Expect=0.0]} {Mouse: ENSMUSG00000022329, Stk3, serine/threonine kinase 3, [RH, Score=548, Expect=0.0]; ENSMUSG00000018209, Stk4, serine/threonine kinase 4, [RH, Score=530, Expect=0.0]} {Dmel: FBgn0261456, hpo, hippo, [RH, Score=462, Expect=9e-157]} {Celegans: WBGene00017472, cst-1, Serine/threonine-protein kinase cst-1 Serine/threonine-protein kinase cst-1 37kDa subunit Serine/threonine-protein kinase cst-1 18kDa subunit, [RH, Score=492, Expect=5e-171]} {Smed: dd_Smed_v6_4384_0_1, dd_Smed_v6_4384_0_1, [RH, Score=479, Expect=3e-166]} {RNA1509_24267} {RNA1310_15236, RNA1509_24267} {RNA1509_24267, RNA815_5298.1} |
| 3. | MligTC455_36461 | 1277 | 26.61 | Mlig455_012811 | Neo: - Age: Down-Down-Up |
BOLA1 | 0.96 | - | - | - | 0.960 | - | - | Mlig455_012811 {REF} {Length: 525} {TRANSSPLICED} {Pfam: BolA-like protein [PF01722.20, score=83.1]} {Human: ENSG00000178096, BOLA1, bolA family member 1, [RH, Score=92.0, Expect=2e-24]} {Mouse: ENSMUSG00000015943, Bola1, bolA-like 1 (E. coli), [RH, Score=91.7, Expect=2e-24]} {Dmel: FBgn0051126, CG31126, [RH, Score=95.9, Expect=4e-26]} {Celegans: WBGene00019658, K11H12.1, Putative bolA-like protein K11H12.1, [RH, Score=69.7, Expect=2e-16]} {Smed: dd_Smed_v6_21377_0_1, dd_Smed_v6_21377_0_1, [RH, Score=61.2, Expect=2e-13]} {RNA1509_44275, RNA1509_5082, RNA1509_9383} {RNA1310_42942, RNA1509_44275, RNA1509_5082, RNA1509_9383} {RNA1509_44275, RNA1509_5082, RNA1509_9383, RNA815_34821} |
| 4. | MligTC455_22093 | 630 | 13.13 | Mlig455_013083 | Neo: - Age: Down-Up-Up |
0.958 | - | - | - | - | - | 0.958 | Mlig455_013083 {REF} {Length: 1654} {TRANSSPLICED} {RNA1509_31997, RNA1509_35219} {RNA1310_19259, RNA1509_31997, RNA1509_35219} {RNA1509_31997, RNA1509_35219, RNA815_14122} |
Berezikov Lab - 2020-2021 © ERIBA