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Results for MligTC455_53856

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_53856 261 5.44 Mlig455_024521, Mlig455_024524

Neo: -

Age: -

Mlig455_024521 {REF} {Length: 1378} {Smed: dd_Smed_v6_8794_0_1, dd_Smed_v6_8794_0_1, [Score=65.1, Expect=3e-12]} {RNA1509_46988} {RNA1310_4968.1} {RNA815_15293}

Mlig455_024524 {REF} {Length: 2298} {Pfam: Major Facilitator Superfamily [PF07690.18, score=53.9]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=24.7]} {Smed: dd_Smed_v6_1284_0_1, dd_Smed_v6_1284_0_1, [Score=73.2, Expect=4e-14]} {RNA1509_46988} {RNA1310_4968.1, RNA1509_46988} {RNA1509_46988, RNA815_15293}

Cumulative graph for MligTC455_53856

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.314 3.018 0.50104 1.00000
RegionR2 1.322 3.018 0.13060 0.44849
RegionR3 0.441 3.018 0.49386 0.99074
RegionR4 -1.061 3.018 0.23473 0.52904
RegionR5 0.822 3.018 0.14865 0.40054
RegionR6 -0.599 3.018 0.40157 0.97261
RegionR7 -1.233 3.018 0.21931 0.83942
RegionR8 1.622 3.018 0.05069 0.44081

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -3.141 3.018 0.62730 1.00000
RegenerationR2 0.349 3.018 0.60632 0.91798
RegenerationR3 -0.08 3.018 0.93457 1.00000
RegenerationR4 0.014 3.018 0.99316 1.00000
RegenerationR5 -0.855 3.018 0.26484 0.69635
RegenerationR6 0.533 3.018 0.54770 0.83784
RegenerationBL -0.243 3.018 0.83832 1.00000
RegenerationTP 0.331 3.018 0.74336 1.00000


Genes with expression patterns similar to MligTC455_53856

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_53856 261 5.44 Mlig455_024521, Mlig455_024524

Neo: -

Age: -

 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_024521 {REF} {Length: 1378} {Smed: dd_Smed_v6_8794_0_1, dd_Smed_v6_8794_0_1, [Score=65.1, Expect=3e-12]} {RNA1509_46988} {RNA1310_4968.1} {RNA815_15293}

Mlig455_024524 {REF} {Length: 2298} {Pfam: Major Facilitator Superfamily [PF07690.18, score=53.9]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=24.7]} {Smed: dd_Smed_v6_1284_0_1, dd_Smed_v6_1284_0_1, [Score=73.2, Expect=4e-14]} {RNA1509_46988} {RNA1310_4968.1, RNA1509_46988} {RNA1509_46988, RNA815_15293}
2. MligTC455_51916 60 1.26 Mlig455_012067, Mlig455_012069

Neo: Int S/G2/M

Age: -

 0.977 - - 0.977 - - -

Mlig455_012067 {REF} {Length: 1778} {TRANSSPLICED} {RNA1509_41350} {RNA1310_32126} {RNA815_14123.1}

Mlig455_012069 {REF} {Length: 1778} {TRANSSPLICED} {RNA1509_41350} {RNA1310_32126} {RNA815_14123.1}
3. MligTC455_24888 155 3.23 Mlig455_019084, Mlig455_064280

Neo: -

Age: Up-Down-Up

 0.971 - - - 0.971 - -

Mlig455_019084 {REF} {Length: 3521} {RNA1509_35560, RNA1509_47523} {RNA1310_18618, RNA1509_35560, RNA1509_47523} {RNA1509_35560, RNA1509_47523, RNA815_20762}

Mlig455_064280 {REF} {Length: 211} {NoTransDecoderORF} {RNA1509_47523} {RNA1310_25677.2} {RNA815_20762}
4. MligTC455_18777 186 3.87 Mlig455_049101

Neo: -

Age: -

 0.964 - - - - 0.964 - Mlig455_049101 {REF} {Length: 516} {RNA1310_131459}
5. MligTC455_21528 367 7.64 Mlig455_015393, Mlig455_015396

Neo: Int S/G2/M

Age: -

 ASCC3 0.964 - - 0.964 - - -

Mlig455_015393 {REF} {Length: 8035} {Pfam: Sec63 Brl domain [PF02889.18, score=439.6]; DEAD/DEAH box helicase [PF00270.31, score=178.1]; Type III restriction enzyme, res subunit [PF04851.17, score=81.0]; Helicase conserved C-terminal domain [PF00271.33, score=48.8]; AAA domain [PF13401.8, score=30.9]; AAA domain [PF13604.8, score=30.2]; AAA domain [PF13245.8, score=22.7]} {Human: ENSG00000112249, ASCC3, activating signal cointegrator 1 complex subunit 3, [RH, Score=2188, Expect=0.0]} {Mouse: ENSMUSG00000038774, Ascc3, activating signal cointegrator 1 complex subunit 3, [RH, Score=2186, Expect=0.0]} {Dmel: FBgn0038344, obe, obelus, [RH, Score=1927, Expect=0.0]} {Celegans: WBGene00013189, Y54E2A.4, [RH, Score=1679, Expect=0.0]} {Smed: dd_Smed_v6_11140_0_1, dd_Smed_v6_11140_0_1, [RH, Score=1927, Expect=0.0]} {RNA1509_2241, RNA1509_55312} {RNA1310_438, RNA1509_2241, RNA1509_55312} {RNA1509_2241, RNA1509_55312, RNA815_146.1}

Mlig455_015396 {REF} {Length: 7701} {Pfam: Sec63 Brl domain [PF02889.18, score=440.8]; DEAD/DEAH box helicase [PF00270.31, score=177.4]; Type III restriction enzyme, res subunit [PF04851.17, score=80.9]; Helicase conserved C-terminal domain [PF00271.33, score=48.4]; AAA domain [PF13401.8, score=30.9]; AAA domain [PF13604.8, score=30.1]; AAA domain [PF13245.8, score=22.2]} {Human: ENSG00000112249, ASCC3, activating signal cointegrator 1 complex subunit 3, [RH, Score=2188, Expect=0.0]} {Mouse: ENSMUSG00000038774, Ascc3, activating signal cointegrator 1 complex subunit 3, [RH, Score=2187, Expect=0.0]} {Dmel: FBgn0038344, obe, obelus, [RH, Score=1927, Expect=0.0]} {Celegans: WBGene00013189, Y54E2A.4, [RH, Score=1677, Expect=0.0]} {Smed: dd_Smed_v6_11140_0_1, dd_Smed_v6_11140_0_1, [RH, Score=1929, Expect=0.0]} {RNA1509_2241} {RNA1310_438} {RNA815_146.1}
6. MligTC455_24308 34 0.71 Mlig455_014238

Neo: -

Age: -

 SLC16A12 0.964 - - 0.964 - - - Mlig455_014238 {REF} {Length: 2357} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=95.9]} {Human: ENSG00000152779, SLC16A12, solute carrier family 16 member 12, [Score=160, Expect=2e-43]} {Mouse: ENSMUSG00000009378, Slc16a12, solute carrier family 16 (monocarboxylic acid transporters), member 12, [Score=158, Expect=6e-43]} {Dmel: FBgn0033095, CG3409, [Score=140, Expect=9e-36]} {Celegans: WBGene00003986, mct-4, MonoCarboxylate Transporter family, [Score=114, Expect=3e-27]} {Smed: dd_Smed_v6_9402_0_1, dd_Smed_v6_9402_0_1, [Score=123, Expect=1e-30]} {RNA1509_33089} {RNA1310_9979} {RNA815_15847}
7. MligTC455_28838 84 1.75 Mlig455_007557

Neo: -

Age: -

Region-enriched R4: 3.260/0.01289
Region-enriched R5: 2.662/0.02640

 0.96 - - - - 0.960 - Mlig455_007557 {REF} {Length: 745} {RNA1310_66594.1} {RNA815_40011}
8. MligTC455_41965 57 1.18 Mlig455_002417, Mlig455_017063, Mlig455_059590

Neo: -

Age: Up-Down-Down

 GABRA6 0.959 - - - 0.959 - -

Mlig455_002417 {REF} {Length: 1761} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=82.2]} {RNA1509_50524} {RNA1310_45397} {RNA815_14584.1}

Mlig455_017063 {REF} {Length: 3275} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=103.3]; Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=56.7]} {Human: ENSG00000145863, GABRA6, gamma-aminobutyric acid type A receptor alpha6 subunit, [Score=191, Expect=3e-56]} {Mouse: ENSMUSG00000020428, Gabra6, gamma-aminobutyric acid (GABA) A receptor, subunit alpha 6, [Score=196, Expect=4e-58]; ENSMUSG00000055078, Gabra5, gamma-aminobutyric acid (GABA) A receptor, subunit alpha 5, [Score=189, Expect=2e-55]} {Dmel: FBgn0030707, CG8916, [Score=259, Expect=3e-82]} {Celegans: WBGene00013914, lgc-37, Ligand-Gated ion Channel, [Score=193, Expect=2e-57]} {Smed: dd_Smed_v6_24908_0_1, dd_Smed_v6_24908_0_1, [Score=234, Expect=1e-73]} {RNA1509_52113} {RNA1310_20592} {RNA815_40535}

Mlig455_059590 {REF} {Length: 3109} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=163.8]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=102.0]} {Human: ENSG00000145863, GABRA6, gamma-aminobutyric acid type A receptor alpha6 subunit, [RH, Score=296, Expect=1e-94]; ENSG00000109158, GABRA4, gamma-aminobutyric acid type A receptor alpha4 subunit, [RH, Score=288, Expect=4e-90]; ENSG00000186297, GABRA5, gamma-aminobutyric acid type A receptor alpha5 subunit, [RH, Score=284, Expect=7e-90]; ENSG00000022355, GABRA1, gamma-aminobutyric acid type A receptor alpha1 subunit, [RH, Score=282, Expect=7e-89]} {Mouse: ENSMUSG00000020428, Gabra6, gamma-aminobutyric acid (GABA) A receptor, subunit alpha 6, [RH, Score=307, Expect=3e-99]; ENSMUSG00000055078, Gabra5, gamma-aminobutyric acid (GABA) A receptor, subunit alpha 5, [RH, Score=296, Expect=1e-94]} {Dmel: FBgn0030707, CG8916, [RH, Score=390, Expect=3e-129]} {Celegans: WBGene00013914, lgc-37, Ligand-Gated ion Channel, [RH, Score=302, Expect=4e-97]} {Smed: dd_Smed_v6_24908_0_1, dd_Smed_v6_24908_0_1, [Score=368, Expect=2e-123]} {RNA1509_52113} {RNA1310_20592} {RNA815_40535}
9. MligTC455_05377 410 8.54 Mlig455_037274, Mlig455_070009

Neo: -

Age: -

 0.957 - - 0.957 - - -

Mlig455_037274 {REF} {Length: 3581} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF1647) [PF07801.13, score=23.7]} {Mouse: ENSMUSG00000024246, Thumpd2, THUMP domain containing 2, [Score=65.5, Expect=1e-10]} {Dmel: FBgn0033236, CG14764, [Score=138, Expect=6e-35]} {Celegans: WBGene00018026, F35A5.4, [Score=86.3, Expect=2e-17]} {Smed: dd_Smed_v6_8359_0_1, dd_Smed_v6_8359_0_1, [RH, Score=230, Expect=5e-69]} {RNA1509_55058} {RNA1310_7962.1} {RNA815_185.1}

Mlig455_070009 {REF} {Length: 2846} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF1647) [PF07801.13, score=24.6]} {Dmel: FBgn0033236, CG14764, [RH, Score=149, Expect=9e-40]} {Celegans: WBGene00017703, F22E5.1, [Score=48.5, Expect=6e-06]} {Smed: dd_Smed_v6_8359_0_1, dd_Smed_v6_8359_0_1, [RH, Score=232, Expect=6e-72]} {RNA1509_30501, RNA1509_39907, RNA1509_40097, RNA1509_55058} {RNA1310_7962.1, RNA1509_30501, RNA1509_39907, RNA1509_40097, RNA1509_55058} {RNA1509_30501, RNA1509_39907, RNA1509_40097, RNA1509_55058, RNA815_185.1}
10. MligTC455_10164 25 0.53 Mlig455_047948

Neo: -

Age: -

 0.957 - - - - 0.957 - Mlig455_047948 {REF} {Length: 437} {NoTransDecoderORF} {RNA1509_42160} {RNA1310_38543} {RNA815_64948}
11. MligTC455_14961 39 0.82 Mlig455_048867

Neo: -

Age: -

 0.956 - - - - 0.956 - Mlig455_048867 {REF} {Length: 979} {NoTransDecoderORF} {RNA1310_98124}
12. MligTC455_07779 143 2.98 Mlig455_022087

Neo: -

Age: Up-Down-Up

 UBA3 0.953 - - 0.953 - - - Mlig455_022087 {REF} {Length: 2132} {TRANSSPLICED} {Human: ENSG00000144744, UBA3, ubiquitin like modifier activating enzyme 3, [Score=114, Expect=3e-30]} {Mouse: ENSMUSG00000030061, Uba3, ubiquitin-like modifier activating enzyme 3, [Score=111, Expect=2e-29]} {Dmel: FBgn0263697, Uba3, Ubiquitin activating enzyme 3, [Score=104, Expect=4e-27]} {Celegans: WBGene00004341, rfl-1, NEDD8-activating enzyme E1 catalytic subunit, [Score=100, Expect=8e-26]} {Smed: dd_Smed_v6_5739_0_1, dd_Smed_v6_5739_0_1, [Score=118, Expect=2e-32]} {RNA1509_32078} {RNA1310_15788.2} {RNA815_7861}
13. MligTC455_07780 144 2.99 Mlig455_053625

Neo: -

Age: -

 UBA3 0.953 - - 0.953 - - - Mlig455_053625 {REF} {Length: 2608} {TRANSSPLICED} {Pfam: ThiF family [PF00899.23, score=193.1]; E2 binding domain [PF08825.12, score=37.3]; Ubiquitin/SUMO-activating enzyme ubiquitin-like domain [PF14732.8, score=23.1]} {Human: ENSG00000144744, UBA3, ubiquitin like modifier activating enzyme 3, [RH, Score=441, Expect=5e-152]} {Mouse: ENSMUSG00000030061, Uba3, ubiquitin-like modifier activating enzyme 3, [RH, Score=438, Expect=2e-151]} {Dmel: FBgn0263697, Uba3, Ubiquitin activating enzyme 3, [RH, Score=379, Expect=2e-128]} {Celegans: WBGene00004341, rfl-1, NEDD8-activating enzyme E1 catalytic subunit, [RH, Score=372, Expect=6e-126]} {Smed: dd_Smed_v6_5739_0_1, dd_Smed_v6_5739_0_1, [RH, Score=426, Expect=2e-147]} {RNA1509_12385, RNA1509_32078} {RNA1310_15788.2, RNA1509_12385, RNA1509_32078} {RNA1509_12385, RNA1509_32078, RNA815_7861}
14. MligTC455_37143 389 8.11 Mlig455_051875, Mlig455_051900, Mlig455_053144

Neo: -

Age: -

Region-enriched R5: 3.075/0.00001

 GRIK3 0.951 - - 0.951 - - -

Mlig455_051875 {REF} {Length: 4101} {Pfam: Ligand-gated ion channel [PF00060.28, score=150.6]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=106.5]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=69.1]; Thiamine transporter protein (Thia_YuaJ) [PF09515.12, score=19.4]} {Human: ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=380, Expect=6e-117]; ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=373, Expect=2e-114]} {Mouse: ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [Score=381, Expect=1e-117]; ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=371, Expect=5e-114]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=364, Expect=2e-111]} {Dmel: FBgn0039927, CG11155, [Score=353, Expect=2e-107]} {Celegans: WBGene00001615, glr-4, GLutamate Receptor family (AMPA), [Score=324, Expect=5e-97]} {Smed: dd_Smed_v6_14655_0_1, dd_Smed_v6_14655_0_1, [Score=416, Expect=2e-130]} {RNA1509_28025} {RNA1310_2952.1} {RNA815_6075}

Mlig455_051900 {REF} {Length: 3909} {Pfam: Ligand-gated ion channel [PF00060.28, score=150.6]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=106.5]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=69.1]; Thiamine transporter protein (Thia_YuaJ) [PF09515.12, score=19.4]} {Human: ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=380, Expect=6e-117]; ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=373, Expect=2e-114]} {Mouse: ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [Score=381, Expect=1e-117]; ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=371, Expect=5e-114]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=364, Expect=2e-111]} {Dmel: FBgn0039927, CG11155, [Score=353, Expect=2e-107]} {Celegans: WBGene00001615, glr-4, GLutamate Receptor family (AMPA), [Score=324, Expect=5e-97]} {Smed: dd_Smed_v6_14655_0_1, dd_Smed_v6_14655_0_1, [Score=416, Expect=2e-130]} {RNA1509_28025} {RNA1310_2952.1} {RNA815_9064}

Mlig455_053144 {REF} {Length: 4100} {Pfam: Ligand-gated ion channel [PF00060.28, score=150.5]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=106.5]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=69.0]; Thiamine transporter protein (Thia_YuaJ) [PF09515.12, score=19.0]} {Human: ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=380, Expect=6e-117]; ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=368, Expect=7e-113]} {Mouse: ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [Score=380, Expect=4e-117]; ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=366, Expect=3e-112]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=364, Expect=3e-111]} {Dmel: FBgn0038837, CG3822, [Score=355, Expect=1e-108]} {Celegans: WBGene00001615, glr-4, GLutamate Receptor family (AMPA), [Score=323, Expect=8e-97]} {Smed: dd_Smed_v6_14655_0_1, dd_Smed_v6_14655_0_1, [Score=412, Expect=4e-129]} {RNA1509_28025} {RNA1310_2952.1} {RNA815_6075}

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