Data search
Results for MligTC455_53867
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_53867 | 32 | 0.66 | Mlig455_049041 | Neo: - Age: - |
NPDC1 | Mlig455_049041 {REF} {Length: 1542} {Pfam: Neural proliferation differentiation control-1 protein (NPDC1) [PF06809.13, score=35.0]; Mature oligodendrocyte transmembrane protein, TMEM132D, C-term [PF15706.7, score=19.6]} {Human: ENSG00000107281, NPDC1, neural proliferation, differentiation and control 1, [Score=53.5, Expect=6e-08]} {Mouse: ENSMUSG00000015094, Npdc1, neural proliferation, differentiation and control 1, [Score=53.5, Expect=3e-08]} {Dmel: FBgn0265182, CG44247, [Score=56.6, Expect=3e-09]} {Smed: dd_Smed_v6_2985_0_1, dd_Smed_v6_2985_0_1, [Score=53.1, Expect=2e-08]} {RNA1310_26085} {RNA815_30554} |
Cumulative graph for MligTC455_53867
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.795 | 1.043 | 0.99980 | 1.00000 | |
| RegionR2 | -0.126 | 1.043 | 0.73849 | 1.00000 | |
| RegionR3 | -1.961 | 1.043 | 0.99978 | 1.00000 | |
| RegionR4 | 4.634 | 1.043 | 0.03006 | 0.13609 | |
| RegionR5 | 1.172 | 1.043 | 0.44340 | 0.80464 | |
| RegionR6 | 1.239 | 1.043 | 0.29226 | 0.88373 | |
| RegionR7 | -1.939 | 1.043 | 0.99986 | 1.00000 | |
| RegionR8 | -1.223 | 1.043 | 0.99970 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.413 | 1.043 | 0.99963 | 1.00000 | |
| RegenerationR2 | -0.545 | 1.043 | 0.37449 | 0.79805 | |
| RegenerationR3 | 2.044 | 1.043 | 0.18225 | 0.61872 | |
| RegenerationR4 | -1.942 | 1.043 | 0.28393 | 0.72910 | |
| RegenerationR5 | 0.659 | 1.043 | 0.60122 | 0.91031 | |
| RegenerationR6 | -2.471 | 1.043 | 0.10163 | 0.39491 | |
| RegenerationBL | 2.177 | 1.043 | 0.30395 | 0.66791 | |
| RegenerationTP | 1.927 | 1.043 | 0.52197 | 0.91509 |
Genes with expression patterns similar to MligTC455_53867
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_53867 | 32 | 0.66 | Mlig455_049041 | Neo: - Age: - |
NPDC1 | 4 | - | - | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_049041 {REF} {Length: 1542} {Pfam: Neural proliferation differentiation control-1 protein (NPDC1) [PF06809.13, score=35.0]; Mature oligodendrocyte transmembrane protein, TMEM132D, C-term [PF15706.7, score=19.6]} {Human: ENSG00000107281, NPDC1, neural proliferation, differentiation and control 1, [Score=53.5, Expect=6e-08]} {Mouse: ENSMUSG00000015094, Npdc1, neural proliferation, differentiation and control 1, [Score=53.5, Expect=3e-08]} {Dmel: FBgn0265182, CG44247, [Score=56.6, Expect=3e-09]} {Smed: dd_Smed_v6_2985_0_1, dd_Smed_v6_2985_0_1, [Score=53.1, Expect=2e-08]} {RNA1310_26085} {RNA815_30554} |
| 2. | MligTC455_43912 | 108 | 2.26 | Mlig455_038979 | Neo: - Age: - Region-enriched R8: 3.794/0.00970 |
SNAI2 | 1.852 | - | - | 0.950 | - | - | 0.902 | Mlig455_038979 {REF} {Length: 2442} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=89.3]; C2H2-type zinc finger [PF13894.8, score=57.9]; Zinc-finger double domain [PF13465.8, score=53.2]; Zinc-finger of C2H2 type [PF12874.9, score=40.2]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=40.0]; C2H2-type zinc finger [PF13912.8, score=35.8]; C2HE / C2H2 / C2HC zinc-binding finger [PF16278.7, score=24.6]; Zinc ribbon domain [PF09723.12, score=19.4]} {Human: ENSG00000019549, SNAI2, snail family transcriptional repressor 2, [RH, Score=204, Expect=3e-62]} {Mouse: ENSMUSG00000022676, Snai2, snail family zinc finger 2, [RH, Score=202, Expect=6e-62]} {Dmel: FBgn0001983, wor, worniu, [RH, Score=207, Expect=7e-61]} {Celegans: WBGene00019299, snai-1, SNAIl family zinc finger 2 transcription factor homolog, [Score=152, Expect=9e-44]} {Smed: dd_Smed_v6_10216_0_1, dd_Smed_v6_10216_0_1, [RH, Score=204, Expect=3e-62]} {RNA1509_43471} {RNA1310_64158} {RNA815_60731} |
| 3. | MligTC455_48225 | 63 | 1.31 | Mlig455_056723, Mlig455_060295 | Neo: - Age: - |
GLRA3 | 1.693 | - | - | - | 0.734 | - | 0.959 | Mlig455_056723 {REF} {Length: 2758} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=152.2]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=129.4]} {Human: ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=270, Expect=2e-84]; ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=265, Expect=1e-82]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [Score=264, Expect=3e-82]; ENSG00000188828, GLRA4, glycine receptor alpha 4, [Score=258, Expect=3e-80]} {Mouse: ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=265, Expect=7e-83]; ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [Score=263, Expect=4e-82]; ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=263, Expect=6e-82]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=257, Expect=1e-79]; ENSMUSG00000033676, Gabrb3, gamma-aminobutyric acid (GABA) A receptor, subunit beta 3, [Score=255, Expect=9e-79]; ENSMUSG00000029212, Gabrb1, gamma-aminobutyric acid (GABA) A receptor, subunit beta 1, [Score=253, Expect=9e-78]} {Dmel: FBgn0024963, GluClalpha, [Score=254, Expect=1e-78]} {Celegans: WBGene00001593, glc-3, Glutamate-gated ChLoride channel; Glutamate-gated chloride channel subunit, [RH, Score=255, Expect=4e-79]} {Smed: dd_Smed_v6_15331_0_1, dd_Smed_v6_15331_0_1, [Score=224, Expect=4e-67]} {RNA1310_13574.1} {RNA815_10577.1} Mlig455_060295 {REF} {Length: 2660} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=129.6]; Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=95.7]} {Human: ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=240, Expect=4e-73]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [Score=235, Expect=3e-71]; ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=233, Expect=8e-71]} {Mouse: ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [Score=234, Expect=4e-71]; ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=233, Expect=2e-70]; ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=233, Expect=5e-71]; ENSMUSG00000033676, Gabrb3, gamma-aminobutyric acid (GABA) A receptor, subunit beta 3, [Score=226, Expect=7e-68]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=225, Expect=7e-68]} {Dmel: FBgn0024963, GluClalpha, [Score=215, Expect=4e-64]} {Celegans: WBGene00001593, glc-3, Glutamate-gated ChLoride channel; Glutamate-gated chloride channel subunit, [Score=222, Expect=2e-66]} {Smed: dd_Smed_v6_15331_0_1, dd_Smed_v6_15331_0_1, [Score=188, Expect=4e-54]} {RNA1310_13574.1} {RNA815_10577.1} |
| 4. | MligTC455_42384 | 263 | 5.49 | Mlig455_062791 | Neo: - Age: Down-Down-Up |
PSPH | 0.987 | - | - | 0.987 | - | - | - | Mlig455_062791 {REF} {Length: 1506} {TRANSSPLICED} {Pfam: haloacid dehalogenase-like hydrolase [PF00702.28, score=44.5]; haloacid dehalogenase-like hydrolase [PF12710.9, score=40.6]; Pyrimidine 5'-nucleotidase (UMPH-1) [PF05822.14, score=21.2]} {Human: ENSG00000146733, PSPH, phosphoserine phosphatase, [RH, Score=192, Expect=5e-61]} {Mouse: ENSMUSG00000029446, Psph, phosphoserine phosphatase, [RH, Score=189, Expect=3e-60]} {Dmel: FBgn0023129, aay, astray, [RH, Score=170, Expect=4e-52]} {Celegans: WBGene00013379, Y62E10A.13, [RH, Score=184, Expect=1e-57]} {Smed: dd_Smed_v6_11185_0_1, dd_Smed_v6_11185_0_1, [RH, Score=172, Expect=7e-54]} {RNA1509_6749} {RNA1310_21602, RNA1509_6749} {RNA1509_6749, RNA815_9131} |
| 5. | MligTC455_51377 | 64 | 1.34 | Mlig455_018509 | Neo: - Age: - |
GRIN1 | 0.987 | - | - | - | - | - | 0.987 | Mlig455_018509 {REF} {Length: 3239} {Pfam: Calmodulin-binding domain C0 of NMDA receptor NR1 subunit [PF10562.11, score=45.3]} {Human: ENSG00000176884, GRIN1, glutamate ionotropic receptor NMDA type subunit 1, [Score=137, Expect=1e-36]} {Mouse: ENSMUSG00000026959, Grin1, glutamate receptor, ionotropic, NMDA1 (zeta 1), [Score=137, Expect=8e-37]} {Dmel: FBgn0010399, Nmdar1, NMDA receptor 1, [Score=133, Expect=8e-36]} {Celegans: WBGene00003774, nmr-1, NMDA class glutamate Receptor; NMDA-type ionotropic glutamate receptor NMR-1, [Score=104, Expect=8e-26]} {Smed: dd_Smed_v6_8187_0_2, dd_Smed_v6_8187_0_2, [Score=217, Expect=4e-67]} {RNA1509_25324} {RNA1310_55098.1} {RNA815_23220.2} |
| 6. | MligTC455_38967 | 71 | 1.48 | Mlig455_060741 | Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.569 Region-enriched R2: 3.815/0.00926 |
UTRN | 0.986 | - | - | 0.986 | - | - | - | Mlig455_060741 {REF} {Length: 4727} {Pfam: EF-hand [PF09069.13, score=127.4]; EF hand [PF09068.13, score=102.4]; Zinc finger, ZZ type [PF00569.19, score=37.7]; WW domain [PF00397.28, score=18.6]} {Human: ENSG00000152818, UTRN, utrophin, [RH, Score=493, Expect=5e-147]; ENSG00000198947, DMD, dystrophin, [RH, Score=489, Expect=1e-150]} {Mouse: ENSMUSG00000019820, Utrn, utrophin, [RH, Score=493, Expect=2e-156]; ENSMUSG00000045103, Dmd, dystrophin, muscular dystrophy, [RH, Score=487, Expect=3e-145]} {Dmel: FBgn0260003, Dys, Dystrophin, [RH, Score=516, Expect=4e-155]} {Celegans: WBGene00001131, dys-1, Dystrophin-1, [RH, Score=337, Expect=1e-95]} {Smed: dd_Smed_v6_5325_0_6, dd_Smed_v6_5325_0_6, [RH, Score=295, Expect=4e-82]} {RNA1509_38827} {RNA1310_24533} {RNA815_12379} |
| 7. | MligTC455_48192 | 17 | 0.36 | Mlig455_020984 | Neo: - Age: Down-Down-Up |
DLG1 | 0.985 | - | - | 0.985 | - | - | - | Mlig455_020984 {REF} {Length: 2812} {Pfam: Guanylate kinase [PF00625.23, score=174.6]; PDZ domain [PF00595.26, score=49.2]; Variant SH3 domain [PF07653.19, score=34.8]; SH3 domain [PF00018.30, score=30.1]; PDZ domain [PF17820.3, score=19.7]} {Human: ENSG00000075711, DLG1, discs large MAGUK scaffold protein 1, [Score=430, Expect=1e-137]; ENSG00000150672, DLG2, discs large MAGUK scaffold protein 2, [Score=426, Expect=4e-135]} {Mouse: ENSMUSG00000052572, Dlg2, discs large MAGUK scaffold protein 2, [RH, Score=426, Expect=1e-141]} {Dmel: FBgn0001624, dlg1, discs large 1, [RH, Score=437, Expect=4e-140]} {Celegans: WBGene00001006, dlg-1, Drosophila Discs LarGe homolog; MAGUK protein DLG-1; SAP97-like protein DLG-1, [Score=345, Expect=2e-105]} {Smed: dd_Smed_v6_8511_0_1, dd_Smed_v6_8511_0_1, [Score=298, Expect=6e-92]} {RNA1509_59616} {RNA1310_7336} {RNA815_36982} |
| 8. | MligTC455_49252 | 89 | 1.85 | Mlig455_062278 | Neo: - Age: logFC(26M/2M)=0.298 |
FOLR2 | 0.984 | - | - | 0.984 | - | - | - | Mlig455_062278 {REF} {Length: 3000} {TRANSSPLICED} {Pfam: Folate receptor family [PF03024.16, score=126.0]} {Human: ENSG00000165457, FOLR2, folate receptor beta, [RH, Score=126, Expect=2e-34]; ENSG00000110203, FOLR3, folate receptor 3, [RH, Score=124, Expect=1e-33]} {Mouse: ENSMUSG00000032725, Folr2, folate receptor 2 (fetal), [RH, Score=124, Expect=1e-33]; ENSMUSG00000001827, Folr1, folate receptor 1 (adult), [RH, Score=120, Expect=2e-32]} {Smed: dd_Smed_v6_8103_0_1, dd_Smed_v6_8103_0_1, [RH, Score=155, Expect=3e-46]} {RNA1509_17845, RNA1509_23353, RNA1509_24248} {RNA1310_17821, RNA1509_17845, RNA1509_24248} {RNA1509_17845, RNA1509_24248, RNA815_16281} |
| 9. | MligTC455_23163 | 51 | 1.06 | Mlig455_040817 | Neo: - Age: - |
0.98 | - | - | - | - | - | 0.980 | Mlig455_040817 {REF} {Length: 5911} {RNA1509_47755} {RNA1310_25553.1} {RNA815_23309} | |
| 10. | MligTC455_38984 | 42 | 0.88 | Mlig455_049162 | Neo: - Age: - |
0.971 | - | - | - | 0.971 | - | - | Mlig455_049162 {REF} {Length: 684} {NoTransDecoderORF} {RNA1509_5313} {RNA1310_1658.1} {RNA815_28415} | |
| 11. | MligTC455_52313 | 53 | 1.1 | Mlig455_036461 | Neo: - Age: - |
0.964 | - | - | - | - | - | 0.964 | Mlig455_036461 {REF} {Length: 242} {NoTransDecoderORF} {RNA1509_5075} | |
| 12. | MligTC455_06238 | 30 | 0.63 | Mlig455_049593 | Neo: - Age: - Region-enriched R4: 5.172/0.00738 |
EPN2 | 0.957 | - | - | - | - | - | 0.957 | Mlig455_049593 {REF} {Length: 2719} {TRANSSPLICED} {Pfam: ENTH domain [PF01417.22, score=160.9]; ANTH domain [PF07651.18, score=26.5]; VHS domain [PF00790.21, score=24.1]} {Human: ENSG00000072134, EPN2, epsin 2, [RH, Score=337, Expect=5e-109]} {Mouse: ENSMUSG00000035203, Epn1, epsin 1, [RH, Score=323, Expect=7e-104]; ENSMUSG00000001036, Epn2, epsin 2, [RH, Score=314, Expect=2e-100]} {Dmel: FBgn0028582, lqf, liquid facets, [RH, Score=290, Expect=7e-89]} {Celegans: WBGene00001329, epn-1, EPsiN (Endocytic protein) homolog, [Score=287, Expect=2e-91]} {Smed: dd_Smed_v6_5602_0_1, dd_Smed_v6_5602_0_1, [RH, Score=290, Expect=6e-95]} {RNA1509_25006} {RNA1310_22026} {RNA815_19761} |
| 13. | MligTC455_51319 | 50 | 1.04 | Mlig455_050267 | Neo: - Age: - Region-enriched R4: 4.268/0.03200 |
RAD51C | 0.956 | - | - | - | - | - | 0.956 | Mlig455_050267 {REF} {Length: 1379} {TRANSSPLICED} {Pfam: Rad51 [PF08423.13, score=138.4]; AAA domain [PF13481.8, score=35.5]; KaiC [PF06745.15, score=18.8]} {Human: ENSG00000108384, RAD51C, RAD51 paralog C, [RH, Score=179, Expect=3e-52]} {Mouse: ENSMUSG00000007646, Rad51c, RAD51 paralog C, [RH, Score=179, Expect=1e-52]} {Dmel: FBgn0003482, spn-D, spindle D, [RH, Score=110, Expect=1e-27]} {Celegans: WBGene00004297, rad-51, RAD51 short isoform; RecA/Rad51/Dmc1-like protein, [Score=70.5, Expect=3e-13]} {Smed: dd_Smed_v6_16724_0_2, dd_Smed_v6_16724_0_2, [RH, Score=183, Expect=3e-55]} {RNA1509_27617} {RNA1310_25633.1, RNA1509_27617} {RNA1509_27617, RNA815_20829} |
| 14. | MligTC455_37008 | 140 | 2.91 | Mlig455_064403 | Neo: - Age: Down-Up-Down |
0.955 | - | - | - | - | - | 0.955 | Mlig455_064403 {REF} {Length: 1208} {Pfam: Neurensin [PF14927.8, score=39.7]; Uncharacterised conserved protein (DUF2371) [PF10177.11, score=21.6]} {RNA1509_45387, RNA1509_51128} {RNA1310_51502.1, RNA1509_45387} {RNA1509_45387, RNA815_17212} | |
| 15. | MligTC455_19813 | 128 | 2.67 | Mlig455_023194 | Neo: - Age: Down-Up-Down |
0.952 | - | - | - | - | - | 0.952 | Mlig455_023194 {REF} {Length: 614} {TRANSSPLICED} {RNA1509_45712} {RNA1310_38588.2} {RNA815_23034.1} | |
| 16. | MligTC455_15885 | 53 | 1.11 | Mlig455_056818 | Neo: - Age: - |
0.951 | - | - | - | - | - | 0.951 | Mlig455_056818 {REF} {Length: 1663} {TRANSSPLICED} {RNA1310_38551} {RNA815_43586} |
Berezikov Lab - 2020-2021 © ERIBA