Data search
Results for MligTC455_53884
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_53884 | 1638 | 34.12 | Mlig455_032238 | Neo: - Age: Down-Up-Down |
TTC1 | Mlig455_032238 {REF} {Length: 1312} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF00515.30, score=35.0]; Tetratricopeptide repeat [PF07719.19, score=25.3]; Tetratricopeptide repeat [PF13371.8, score=20.7]; TPR repeat [PF13414.8, score=20.6]; Tetratricopeptide repeat [PF13176.8, score=20.4]} {Human: ENSG00000113312, TTC1, tetratricopeptide repeat domain 1, [RH, Score=149, Expect=4e-42]} {Mouse: ENSMUSG00000041278, Ttc1, tetratricopeptide repeat domain 1, [RH, Score=145, Expect=1e-40]} {Dmel: FBgn0038428, CG14894, [RH, Score=147, Expect=5e-42]} {Celegans: WBGene00016390, C34B2.5, [RH, Score=74.3, Expect=2e-15]} {Smed: dd_Smed_v6_10054_0_1, dd_Smed_v6_10054_0_1, [RH, Score=154, Expect=8e-44]} {RNA1509_14009, RNA1509_24912, RNA1509_39639, RNA1509_40805, RNA1509_52859} {RNA1310_24891, RNA1509_14009, RNA1509_24912, RNA1509_39639, RNA1509_40805, RNA1509_52859} {RNA1509_14009, RNA1509_24912, RNA1509_39639, RNA1509_40805, RNA1509_52859, RNA815_11712} |
Cumulative graph for MligTC455_53884
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.656 | 5.353 | 0.07008 | 0.59317 | |
| RegionR2 | -0.256 | 5.353 | 0.45557 | 0.84347 | |
| RegionR3 | -0.053 | 5.353 | 0.85655 | 1.00000 | |
| RegionR4 | 0.851 | 5.353 | 0.00816 | 0.05236 | |
| RegionR5 | 0.952 | 5.353 | 0.00013 | 0.00210 | |
| RegionR6 | 0.543 | 5.353 | 0.05233 | 0.42902 | |
| RegionR7 | -0.198 | 5.353 | 0.60428 | 1.00000 | |
| RegionR8 | -0.182 | 5.353 | 0.71196 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -7.339 | 5.353 | 0.07050 | 0.75209 | |
| RegenerationR2 | 0.02 | 5.353 | 0.94120 | 1.00000 | |
| RegenerationR3 | 0.206 | 5.353 | 0.48093 | 0.85043 | |
| RegenerationR4 | -0.001 | 5.353 | 0.99577 | 1.00000 | |
| RegenerationR5 | -0.146 | 5.353 | 0.57146 | 0.89641 | |
| RegenerationR6 | 0.012 | 5.353 | 0.96631 | 1.00000 | |
| RegenerationBL | -0.796 | 5.353 | 0.03602 | 0.21407 | |
| RegenerationTP | 0.67 | 5.353 | 0.07163 | 0.42949 |
Genes with expression patterns similar to MligTC455_53884
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_53884 | 1638 | 34.12 | Mlig455_032238 | Neo: - Age: Down-Up-Down |
TTC1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_032238 {REF} {Length: 1312} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF00515.30, score=35.0]; Tetratricopeptide repeat [PF07719.19, score=25.3]; Tetratricopeptide repeat [PF13371.8, score=20.7]; TPR repeat [PF13414.8, score=20.6]; Tetratricopeptide repeat [PF13176.8, score=20.4]} {Human: ENSG00000113312, TTC1, tetratricopeptide repeat domain 1, [RH, Score=149, Expect=4e-42]} {Mouse: ENSMUSG00000041278, Ttc1, tetratricopeptide repeat domain 1, [RH, Score=145, Expect=1e-40]} {Dmel: FBgn0038428, CG14894, [RH, Score=147, Expect=5e-42]} {Celegans: WBGene00016390, C34B2.5, [RH, Score=74.3, Expect=2e-15]} {Smed: dd_Smed_v6_10054_0_1, dd_Smed_v6_10054_0_1, [RH, Score=154, Expect=8e-44]} {RNA1509_14009, RNA1509_24912, RNA1509_39639, RNA1509_40805, RNA1509_52859} {RNA1310_24891, RNA1509_14009, RNA1509_24912, RNA1509_39639, RNA1509_40805, RNA1509_52859} {RNA1509_14009, RNA1509_24912, RNA1509_39639, RNA1509_40805, RNA1509_52859, RNA815_11712} |
| 2. | MligTC455_20095 | 1510 | 31.46 | Mlig455_014260 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.319 Region-enriched R5: 1.007/0.00072 |
TATDN1 | 2.497 | - | - | - | 0.954 | 0.731 | 0.812 | Mlig455_014260 {REF} {Length: 1259} {TRANSSPLICED} {Pfam: TatD related DNase [PF01026.23, score=172.1]} {Human: ENSG00000147687, TATDN1, TatD DNase domain containing 1, [RH, Score=285, Expect=2e-94]} {Mouse: ENSMUSG00000050891, Tatdn1, TatD DNase domain containing 1, [RH, Score=281, Expect=2e-93]} {Dmel: FBgn0033117, CG3358, [RH, Score=251, Expect=8e-82]} {Celegans: WBGene00000795, crn-2, Cell death-related nuclease 2; Cell-death-Related Nuclease, [RH, Score=142, Expect=1e-39]} {Smed: dd_Smed_v6_9083_0_1, dd_Smed_v6_9083_0_1, [RH, Score=278, Expect=2e-92]} {RNA1509_14516, RNA1509_16242} {RNA1310_25526, RNA1509_14516, RNA1509_16242} {RNA1509_14516, RNA1509_16242, RNA815_29967} |
| 3. | MligTC455_40771 | 650 | 13.55 | Mlig455_030524 | Neo: - Age: - |
0.977 | - | - | - | - | - | 0.977 | Mlig455_030524 {REF} {Length: 4171} {TRANSSPLICED} {Smed: dd_Smed_v6_4196_0_1, dd_Smed_v6_4196_0_1, [RH, Score=70.9, Expect=2e-12]} {RNA1509_21134, RNA1509_9133} {RNA1310_6780, RNA1509_21134} {RNA1509_21134, RNA815_18387} | |
| 4. | MligTC455_44832 | 633 | 13.2 | Mlig455_016379 | Neo: - Age: - |
NEDD4L | 0.964 | - | - | - | - | - | 0.964 | Mlig455_016379 {REF} {Length: 5292} {Pfam: HECT-domain (ubiquitin-transferase) [PF00632.27, score=325.3]; WW domain [PF00397.28, score=163.6]; C2 domain [PF00168.32, score=89.1]} {Human: ENSG00000049759, NEDD4L, neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, [RH, Score=793, Expect=0.0]; ENSG00000069869, NEDD4, neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, [RH, Score=769, Expect=0.0]} {Mouse: ENSMUSG00000024589, Nedd4l, neural precursor cell expressed, developmentally down-regulated gene 4-like, [RH, Score=731, Expect=0.0]} {Dmel: FBgn0259174, Nedd4, [RH, Score=753, Expect=0.0]} {Celegans: WBGene00022358, Y92H12A.2, E3 ubiquitin-protein ligase, [RH, Score=620, Expect=0.0]} {Smed: dd_Smed_v6_7322_0_1, dd_Smed_v6_7322_0_1, [RH, Score=879, Expect=0.0]} {RNA1509_38104, RNA1509_39380, RNA1509_5978} {RNA1310_3271, RNA1509_38104, RNA1509_39380, RNA1509_5978} {RNA1509_38104, RNA1509_39380, RNA1509_5978, RNA815_784} |
| 5. | MligTC455_06662 | 1159 | 24.15 | Mlig455_053774 | Neo: Irradiation Age: Down-Up-Up Region-enriched R5: 1.197/0.00038 |
HSF1 | 0.957 | - | - | - | 0.957 | - | - | Mlig455_053774 {REF} {Length: 1528} {TRANSSPLICED} {Pfam: HSF-type DNA-binding [PF00447.19, score=95.5]} {Human: ENSG00000284774, HSF1, heat shock transcription factor 1, [RH, Score=135, Expect=1e-34]; ENSG00000185122, HSF1, heat shock transcription factor 1, [RH, Score=135, Expect=1e-34]; ENSG00000102878, HSF4, heat shock transcription factor 4, [RH, Score=129, Expect=7e-33]} {Mouse: ENSMUSG00000022556, Hsf1, heat shock factor 1, [RH, Score=136, Expect=4e-35]} {Celegans: WBGene00002004, hsf-1, Heat Shock Factor; Heat shock transcription factor 1, [RH, Score=124, Expect=1e-30]} {Smed: dd_Smed_v6_7535_0_1, dd_Smed_v6_7535_0_1, [RH, Score=103, Expect=9e-24]} {RNA1509_10735} {RNA1310_20829, RNA1509_10735} {RNA1509_10735, RNA815_10587.1} |
Berezikov Lab - 2020-2021 © ERIBA