Data search
Results for MligTC455_53903
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_53903 | 3502 | 72.97 | Mlig455_066790 | Neo: - Age: logFC(26M/2M)=0.307 |
SHARPIN | Mlig455_066790 {REF} {Length: 913} {TRANSSPLICED} {Pfam: Zn-finger in Ran binding protein and others [PF00641.20, score=30.7]} {Human: ENSG00000179526, SHARPIN, SHANK associated RH domain interactor, [RH, Score=51.6, Expect=6e-09]} {Mouse: ENSMUSG00000022552, Sharpin, SHANK-associated RH domain interacting protein, [RH, Score=46.6, Expect=3e-07]} {RNA1509_19624, RNA1509_2615} {RNA1310_38929, RNA1509_19624, RNA1509_2615} {RNA1509_19624, RNA1509_2615, RNA815_18756} |
Cumulative graph for MligTC455_53903
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.696 | 6.277 | 0.22839 | 0.87215 | |
| RegionR2 | -0.411 | 6.277 | 0.28842 | 0.67662 | |
| RegionR3 | 0.272 | 6.277 | 0.39158 | 0.92184 | |
| RegionR4 | 0.408 | 6.277 | 0.25651 | 0.55751 | |
| RegionR5 | 0.392 | 6.277 | 0.19689 | 0.48505 | |
| RegionR6 | 0.322 | 6.277 | 0.30826 | 0.89890 | |
| RegionR7 | -0.261 | 6.277 | 0.45340 | 1.00000 | |
| RegionR8 | -0.027 | 6.277 | 0.94497 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.733 | 6.277 | 0.37785 | 1.00000 | |
| RegenerationR2 | -0.264 | 6.277 | 0.50806 | 0.87468 | |
| RegenerationR3 | -0.446 | 6.277 | 0.27560 | 0.70966 | |
| RegenerationR4 | -0.555 | 6.277 | 0.18567 | 0.62695 | |
| RegenerationR5 | -0.651 | 6.277 | 0.10100 | 0.48326 | |
| RegenerationR6 | -0.644 | 6.277 | 0.11451 | 0.41673 | |
| RegenerationBL | -0.482 | 6.277 | 0.20729 | 0.54955 | |
| RegenerationTP | -0.208 | 6.277 | 0.60981 | 0.96643 |
Genes with expression patterns similar to MligTC455_53903
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_53903 | 3502 | 72.97 | Mlig455_066790 | Neo: - Age: logFC(26M/2M)=0.307 |
SHARPIN | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_066790 {REF} {Length: 913} {TRANSSPLICED} {Pfam: Zn-finger in Ran binding protein and others [PF00641.20, score=30.7]} {Human: ENSG00000179526, SHARPIN, SHANK associated RH domain interactor, [RH, Score=51.6, Expect=6e-09]} {Mouse: ENSMUSG00000022552, Sharpin, SHANK-associated RH domain interacting protein, [RH, Score=46.6, Expect=3e-07]} {RNA1509_19624, RNA1509_2615} {RNA1310_38929, RNA1509_19624, RNA1509_2615} {RNA1509_19624, RNA1509_2615, RNA815_18756} |
| 2. | MligTC455_53902 | 2900 | 60.41 | Mlig455_040749 | Neo: - Age: logFC(26M/2M)=0.616 |
SHARPIN | 5.519 | 0.851 | 0.965 | 0.986 | 0.965 | 0.802 | 0.950 | Mlig455_040749 {REF} {Length: 919} {TRANSSPLICED} {Pfam: Zn-finger in Ran binding protein and others [PF00641.20, score=29.8]; Ubiquitin family [PF00240.25, score=18.9]} {Human: ENSG00000179526, SHARPIN, SHANK associated RH domain interactor, [RH, Score=52.8, Expect=1e-08]} {Mouse: ENSMUSG00000027466, Rbck1, RanBP-type and C3HC4-type zinc finger containing 1, [Score=50.1, Expect=1e-06]; ENSMUSG00000022552, Sharpin, SHANK-associated RH domain interacting protein, [Score=47.8, Expect=4e-06]} {RNA1509_2615} {RNA1310_38929} {RNA815_18756} |
| 3. | MligTC455_30364 | 252 | 5.25 | Mlig455_058073 | Neo: - Age: logFC(26M/2M)=0.482 |
0.97 | - | - | - | - | 0.970 | - | Mlig455_058073 {REF} {Length: 3291} {TRANSSPLICED} {RNA1509_33897} {RNA1310_18647} {RNA815_14645} | |
| 4. | MligTC455_47529 | 654 | 13.62 | Mlig455_016302 | Neo: - Age: - |
MED19 | 0.958 | - | - | - | - | 0.958 | - | Mlig455_016302 {REF} {Length: 1225} {TRANSSPLICED} {Pfam: Mediator of RNA pol II transcription subunit 19 [PF10278.11, score=122.9]} {Human: ENSG00000156603, MED19, mediator complex subunit 19, [RH, Score=117, Expect=1e-30]} {Mouse: ENSMUSG00000027080, Med19, mediator complex subunit 19, [RH, Score=117, Expect=8e-31]} {Dmel: FBgn0036761, MED19, Mediator complex subunit 19, [RH, Score=82.8, Expect=1e-17]} {Celegans: WBGene00007019, mdt-19, Mediator of RNA polymerase II transcription subunit 19, [RH, Score=60.8, Expect=7e-11]} {Smed: dd_Smed_v6_4283_0_1, dd_Smed_v6_4283_0_1, [RH, Score=90.1, Expect=1e-20]} {RNA1509_20056, RNA1509_53904} {RNA1310_27356.1, RNA1509_20056, RNA1509_53904} {RNA1509_20056, RNA1509_53904, RNA815_18046.1} |
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