TomoSeq data search

Data search

Results for MligTC455_53913

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_53913	2545	53.02	Mlig455_005308, Mlig455_029975	Neo: - Age: Down-Up-Down	HPCAL1	Mlig455_005308 {REF} {Length: 1210} {Pfam: EF-hand domain pair [PF13499.8, score=81.7]; EF hand [PF00036.34, score=66.6]; EF-hand domain [PF13405.8, score=63.2]; EF hand [PF13202.8, score=59.5]; EF-hand domain pair [PF13833.8, score=50.4]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=20.9]} {Human: ENSG00000115756, HPCAL1, hippocalcin like 1, [Score=87.4, Expect=3e-21]; ENSG00000104490, NCALD, neurocalcin delta, [Score=87.4, Expect=3e-21]} {Mouse: ENSMUSG00000051359, Ncald, neurocalcin delta, [Score=87.4, Expect=2e-21]; ENSMUSG00000071379, Hpcal1, hippocalcin-like 1, [Score=86.7, Expect=4e-21]} {Dmel: FBgn0036926, CG7646, [Score=92.4, Expect=1e-23]} {Celegans: WBGene00003564, ncs-2, Neuronal calcium sensor 2, [Score=81.3, Expect=2e-19]} {Smed: dd_Smed_v6_3283_0_1, dd_Smed_v6_3283_0_1, [Score=72.4, Expect=5e-16]} {RNA1509_46244} {RNA1310_33885} {RNA815_17097} Mlig455_029975 {REF} {Length: 1484} {Pfam: EF-hand domain pair [PF13499.8, score=81.4]; EF hand [PF00036.34, score=66.4]; EF-hand domain [PF13405.8, score=63.3]; EF hand [PF13202.8, score=59.5]; EF-hand domain pair [PF13833.8, score=51.9]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=19.8]} {Human: ENSG00000115756, HPCAL1, hippocalcin like 1, [Score=87.8, Expect=2e-21]; ENSG00000104490, NCALD, neurocalcin delta, [Score=87.4, Expect=2e-21]} {Mouse: ENSMUSG00000051359, Ncald, neurocalcin delta, [Score=87.8, Expect=1e-21]; ENSMUSG00000071379, Hpcal1, hippocalcin-like 1, [Score=87.0, Expect=3e-21]} {Dmel: FBgn0036926, CG7646, [Score=93.2, Expect=8e-24]} {Celegans: WBGene00003564, ncs-2, Neuronal calcium sensor 2, [Score=82.4, Expect=7e-20]} {Smed: dd_Smed_v6_3283_0_1, dd_Smed_v6_3283_0_1, [Score=72.8, Expect=3e-16]} {RNA1509_21544, RNA1509_46244} {RNA1310_33885, RNA1509_21544, RNA1509_46244} {RNA1509_21544, RNA1509_46244, RNA815_17097}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_53913

2545

53.02

Mlig455_005308, Mlig455_029975

Neo: -

Age: Down-Up-Down

HPCAL1

Mlig455_005308 {REF} {Length: 1210} {Pfam: EF-hand domain pair [PF13499.8, score=81.7]; EF hand [PF00036.34, score=66.6]; EF-hand domain [PF13405.8, score=63.2]; EF hand [PF13202.8, score=59.5]; EF-hand domain pair [PF13833.8, score=50.4]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=20.9]} {Human: ENSG00000115756, HPCAL1, hippocalcin like 1, [Score=87.4, Expect=3e-21]; ENSG00000104490, NCALD, neurocalcin delta, [Score=87.4, Expect=3e-21]} {Mouse: ENSMUSG00000051359, Ncald, neurocalcin delta, [Score=87.4, Expect=2e-21]; ENSMUSG00000071379, Hpcal1, hippocalcin-like 1, [Score=86.7, Expect=4e-21]} {Dmel: FBgn0036926, CG7646, [Score=92.4, Expect=1e-23]} {Celegans: WBGene00003564, ncs-2, Neuronal calcium sensor 2, [Score=81.3, Expect=2e-19]} {Smed: dd_Smed_v6_3283_0_1, dd_Smed_v6_3283_0_1, [Score=72.4, Expect=5e-16]} {RNA1509_46244} {RNA1310_33885} {RNA815_17097}

Mlig455_029975 {REF} {Length: 1484} {Pfam: EF-hand domain pair [PF13499.8, score=81.4]; EF hand [PF00036.34, score=66.4]; EF-hand domain [PF13405.8, score=63.3]; EF hand [PF13202.8, score=59.5]; EF-hand domain pair [PF13833.8, score=51.9]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=19.8]} {Human: ENSG00000115756, HPCAL1, hippocalcin like 1, [Score=87.8, Expect=2e-21]; ENSG00000104490, NCALD, neurocalcin delta, [Score=87.4, Expect=2e-21]} {Mouse: ENSMUSG00000051359, Ncald, neurocalcin delta, [Score=87.8, Expect=1e-21]; ENSMUSG00000071379, Hpcal1, hippocalcin-like 1, [Score=87.0, Expect=3e-21]} {Dmel: FBgn0036926, CG7646, [Score=93.2, Expect=8e-24]} {Celegans: WBGene00003564, ncs-2, Neuronal calcium sensor 2, [Score=82.4, Expect=7e-20]} {Smed: dd_Smed_v6_3283_0_1, dd_Smed_v6_3283_0_1, [Score=72.8, Expect=3e-16]} {RNA1509_21544, RNA1509_46244} {RNA1310_33885, RNA1509_21544, RNA1509_46244} {RNA1509_21544, RNA1509_46244, RNA815_17097}

Cumulative graph for MligTC455_53913

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.597	5.834	0.03197	0.45399
RegionR2	-0.629	5.834	0.09759	0.38369
RegionR3	0.073	5.834	0.81477	1.00000
RegionR4	0.75	5.834	0.03621	0.15505
RegionR5	0.41	5.834	0.17367	0.44516
RegionR6	0.244	5.834	0.43979	0.99965
RegionR7	0.376	5.834	0.28204	0.91510
RegionR8	0.373	5.834	0.34627	0.97990

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.221	5.834	0.82891	1.00000
RegenerationR2	0.355	5.834	0.32712	0.76522
RegenerationR3	0.024	5.834	0.95130	1.00000
RegenerationR4	0.107	5.834	0.77867	0.97997
RegenerationR5	0.186	5.834	0.61201	0.91493
RegenerationR6	-0.222	5.834	0.56746	0.85009
RegenerationBL	-0.13	5.834	0.71794	1.00000
RegenerationTP	0.354	5.834	0.34887	0.79042

Genes with expression patterns similar to MligTC455_53913

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_53913	2545	53.02	Mlig455_005308, Mlig455_029975	Neo: - Age: Down-Up-Down	HPCAL1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_005308 {REF} {Length: 1210} {Pfam: EF-hand domain pair [PF13499.8, score=81.7]; EF hand [PF00036.34, score=66.6]; EF-hand domain [PF13405.8, score=63.2]; EF hand [PF13202.8, score=59.5]; EF-hand domain pair [PF13833.8, score=50.4]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=20.9]} {Human: ENSG00000115756, HPCAL1, hippocalcin like 1, [Score=87.4, Expect=3e-21]; ENSG00000104490, NCALD, neurocalcin delta, [Score=87.4, Expect=3e-21]} {Mouse: ENSMUSG00000051359, Ncald, neurocalcin delta, [Score=87.4, Expect=2e-21]; ENSMUSG00000071379, Hpcal1, hippocalcin-like 1, [Score=86.7, Expect=4e-21]} {Dmel: FBgn0036926, CG7646, [Score=92.4, Expect=1e-23]} {Celegans: WBGene00003564, ncs-2, Neuronal calcium sensor 2, [Score=81.3, Expect=2e-19]} {Smed: dd_Smed_v6_3283_0_1, dd_Smed_v6_3283_0_1, [Score=72.4, Expect=5e-16]} {RNA1509_46244} {RNA1310_33885} {RNA815_17097} Mlig455_029975 {REF} {Length: 1484} {Pfam: EF-hand domain pair [PF13499.8, score=81.4]; EF hand [PF00036.34, score=66.4]; EF-hand domain [PF13405.8, score=63.3]; EF hand [PF13202.8, score=59.5]; EF-hand domain pair [PF13833.8, score=51.9]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=19.8]} {Human: ENSG00000115756, HPCAL1, hippocalcin like 1, [Score=87.8, Expect=2e-21]; ENSG00000104490, NCALD, neurocalcin delta, [Score=87.4, Expect=2e-21]} {Mouse: ENSMUSG00000051359, Ncald, neurocalcin delta, [Score=87.8, Expect=1e-21]; ENSMUSG00000071379, Hpcal1, hippocalcin-like 1, [Score=87.0, Expect=3e-21]} {Dmel: FBgn0036926, CG7646, [Score=93.2, Expect=8e-24]} {Celegans: WBGene00003564, ncs-2, Neuronal calcium sensor 2, [Score=82.4, Expect=7e-20]} {Smed: dd_Smed_v6_3283_0_1, dd_Smed_v6_3283_0_1, [Score=72.8, Expect=3e-16]} {RNA1509_21544, RNA1509_46244} {RNA1310_33885, RNA1509_21544, RNA1509_46244} {RNA1509_21544, RNA1509_46244, RNA815_17097}
2.	MligTC455_28245	283	5.89	Mlig455_000124	Neo: - Age: Up-Down-Down		0.983	-	-	-	-	0.983	-	Mlig455_000124 {REF} {Length: 711} {NoTransDecoderORF} {RNA1509_50502} {RNA1310_51511} {RNA815_58548}
3.	MligTC455_51804	7890	164.37	Mlig455_051630	Neo: - Age: logFC(26M/2M)=-0.246	CHMP5	0.951	-	-	-	-	0.951	-	Mlig455_051630 {REF} {Length: 2311} {Pfam: Snf7 [PF03357.23, score=182.2]; Nucleopolyhedrovirus P10 protein [PF05531.14, score=22.0]} {Human: ENSG00000086065, CHMP5, charged multivesicular body protein 5, [RH, Score=294, Expect=1e-101]} {Mouse: ENSMUSG00000028419, Chmp5, charged multivesicular body protein 5, [RH, Score=294, Expect=9e-102]} {Dmel: FBgn0036740, Vps60, Vacuolar protein sorting 60, [RH, Score=281, Expect=1e-96]} {Celegans: WBGene00018290, vps-60, Related to yeast Vacuolar Protein Sorting factor, [RH, Score=271, Expect=6e-93]} {Smed: dd_Smed_v6_1158_0_1, dd_Smed_v6_1158_0_1, [RH, Score=342, Expect=6e-121]} {RNA1509_15403} {RNA1310_25926.1} {RNA815_8046}
4.	MligTC455_48614	290	6.04	Mlig455_043747, Mlig455_047478	Neo: - Age: -		0.95	-	-	-	-	0.950	-	Mlig455_043747 {REF} {Length: 477} {RNA1509_18459} {RNA1310_80028} {RNA815_47743.1} Mlig455_047478 {REF} {Length: 477} {RNA1509_18459} {RNA1310_80028} {RNA815_47743.1}