Data search


search
Exact
Search

Results for MligTC455_53929

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_53929 24321 506.69 Mlig455_007924, Mlig455_008062

Neo: Neoblast

Age: -

RPL24

Mlig455_007924 {REF} {Length: 766} {TRANSSPLICED} {Pfam: Ribosomal protein L24e [PF01246.22, score=100.4]} {Human: ENSG00000114391, RPL24, ribosomal protein L24, [RH, Score=173, Expect=1e-55]} {Mouse: ENSMUSG00000098274, Rpl24, ribosomal protein L24, [RH, Score=173, Expect=9e-56]} {Dmel: FBgn0032518, RpL24, Ribosomal protein L24, [RH, Score=172, Expect=1e-55]} {Celegans: WBGene00004436, rpl-24.1, 60S ribosomal protein L24, [RH, Score=131, Expect=1e-39]} {Smed: dd_Smed_v6_172_0_1, dd_Smed_v6_172_0_1, [RH, Score=143, Expect=2e-44]} {RNA1509_1862, RNA1509_2012, RNA1509_3883} {RNA1310_46978.1, RNA1509_1862, RNA1509_2012, RNA1509_3883} {RNA1509_1862, RNA1509_2012, RNA1509_3883, RNA815_22841}

Mlig455_008062 {REF} {Length: 637} {TRANSSPLICED} {Pfam: Ribosomal protein L24e [PF01246.22, score=100.4]} {Human: ENSG00000114391, RPL24, ribosomal protein L24, [RH, Score=173, Expect=1e-55]} {Mouse: ENSMUSG00000098274, Rpl24, ribosomal protein L24, [RH, Score=173, Expect=7e-56]} {Dmel: FBgn0032518, RpL24, Ribosomal protein L24, [RH, Score=172, Expect=1e-55]} {Celegans: WBGene00004436, rpl-24.1, 60S ribosomal protein L24, [RH, Score=131, Expect=1e-39]} {Smed: dd_Smed_v6_172_0_1, dd_Smed_v6_172_0_1, [RH, Score=143, Expect=2e-44]} {RNA1509_14596, RNA1509_29322, RNA1509_7799} {RNA1310_46978.1, RNA1509_14596, RNA1509_29322, RNA1509_7799} {RNA1509_14596, RNA1509_29322, RNA1509_7799, RNA815_22841}

Cumulative graph for MligTC455_53929

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.678 9.032 0.03699 0.47273
RegionR2 -0.722 9.032 0.00646 0.07596
RegionR3 0.269 9.032 0.22845 0.76934
RegionR4 0.525 9.032 0.03240 0.14350
RegionR5 0.771 9.032 0.00025 0.00340
RegionR6 0.312 9.032 0.15722 0.70627
RegionR7 -0.068 9.032 0.76516 1.00000
RegionR8 -0.409 9.032 0.11272 0.62103

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.545 9.032 0.16339 0.90513
RegenerationR2 -0.336 9.032 0.24328 0.69125
RegenerationR3 -0.271 9.032 0.35062 0.77140
RegenerationR4 -0.242 9.032 0.41498 0.82334
RegenerationR5 -0.459 9.032 0.11166 0.50433
RegenerationR6 -0.135 9.032 0.64073 0.89379
RegenerationBL -0.25 9.032 0.32462 0.69130
RegenerationTP -0.404 9.032 0.14430 0.56574


Genes with expression patterns similar to MligTC455_53929

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_53929 24321 506.69 Mlig455_007924, Mlig455_008062

Neo: Neoblast

Age: -

RPL24 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_007924 {REF} {Length: 766} {TRANSSPLICED} {Pfam: Ribosomal protein L24e [PF01246.22, score=100.4]} {Human: ENSG00000114391, RPL24, ribosomal protein L24, [RH, Score=173, Expect=1e-55]} {Mouse: ENSMUSG00000098274, Rpl24, ribosomal protein L24, [RH, Score=173, Expect=9e-56]} {Dmel: FBgn0032518, RpL24, Ribosomal protein L24, [RH, Score=172, Expect=1e-55]} {Celegans: WBGene00004436, rpl-24.1, 60S ribosomal protein L24, [RH, Score=131, Expect=1e-39]} {Smed: dd_Smed_v6_172_0_1, dd_Smed_v6_172_0_1, [RH, Score=143, Expect=2e-44]} {RNA1509_1862, RNA1509_2012, RNA1509_3883} {RNA1310_46978.1, RNA1509_1862, RNA1509_2012, RNA1509_3883} {RNA1509_1862, RNA1509_2012, RNA1509_3883, RNA815_22841}

Mlig455_008062 {REF} {Length: 637} {TRANSSPLICED} {Pfam: Ribosomal protein L24e [PF01246.22, score=100.4]} {Human: ENSG00000114391, RPL24, ribosomal protein L24, [RH, Score=173, Expect=1e-55]} {Mouse: ENSMUSG00000098274, Rpl24, ribosomal protein L24, [RH, Score=173, Expect=7e-56]} {Dmel: FBgn0032518, RpL24, Ribosomal protein L24, [RH, Score=172, Expect=1e-55]} {Celegans: WBGene00004436, rpl-24.1, 60S ribosomal protein L24, [RH, Score=131, Expect=1e-39]} {Smed: dd_Smed_v6_172_0_1, dd_Smed_v6_172_0_1, [RH, Score=143, Expect=2e-44]} {RNA1509_14596, RNA1509_29322, RNA1509_7799} {RNA1310_46978.1, RNA1509_14596, RNA1509_29322, RNA1509_7799} {RNA1509_14596, RNA1509_29322, RNA1509_7799, RNA815_22841}
2. MligTC455_43819 6574 136.95 Mlig455_036030, Mlig455_036118

Neo: Neoblast

Age: Down-Up-Up, logFC(26M/2M)=0.458

Region-enriched R5: 1.273/0.00000

MRPL35 4.099 0.703 0.841 - 0.810 0.975 0.770

Mlig455_036030 {REF} {Length: 587} {TRANSSPLICED} {Pfam: Ribosomal protein L35 [PF01632.21, score=31.9]} {Human: ENSG00000132313, MRPL35, mitochondrial ribosomal protein L35, [RH, Score=50.4, Expect=7e-08]} {Mouse: ENSMUSG00000052962, Mrpl35, mitochondrial ribosomal protein L35, [RH, Score=48.5, Expect=3e-07]} {Dmel: FBgn0038923, mRpL35, mitochondrial ribosomal protein L35, [RH, Score=60.5, Expect=6e-12]} {Celegans: WBGene00010812, mrpl-35, Probable 39S ribosomal protein L35, mitochondrial, [RH, Score=49.3, Expect=5e-08]} {RNA1509_57708} {RNA1310_56883} {RNA815_30885}

Mlig455_036118 {REF} {Length: 591} {TRANSSPLICED} {Pfam: Ribosomal protein L35 [PF01632.21, score=31.9]} {Human: ENSG00000132313, MRPL35, mitochondrial ribosomal protein L35, [RH, Score=50.4, Expect=7e-08]} {Mouse: ENSMUSG00000052962, Mrpl35, mitochondrial ribosomal protein L35, [RH, Score=48.5, Expect=3e-07]} {Dmel: FBgn0038923, mRpL35, mitochondrial ribosomal protein L35, [RH, Score=60.5, Expect=6e-12]} {Celegans: WBGene00010812, mrpl-35, Probable 39S ribosomal protein L35, mitochondrial, [RH, Score=49.3, Expect=5e-08]} {RNA1509_4164, RNA1509_57708, RNA1509_7396} {RNA1310_56883, RNA1509_4164, RNA1509_57708, RNA1509_7396} {RNA1509_4164, RNA1509_57708, RNA1509_7396, RNA815_30885}
3. MligTC455_43820 3268 68.08 Mlig455_036154

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.932

Region-enriched R5: 1.293/0.00000

4.099 0.702 0.840 - 0.810 0.972 0.775 Mlig455_036154 {REF} {Length: 591} {TRANSSPLICED} {RNA1509_7396} {RNA1310_56883} {RNA815_30885}
4. MligTC455_21272 4347 90.56 Mlig455_003588

Neo: -

Age: -

Region-enriched R3: 1.729/0.00219
Region-enriched R5: 1.335/0.01435

SLC5A8 1.851 - - - 0.889 0.962 - Mlig455_003588 {REF} {Length: 5902} {Pfam: Sodium:solute symporter family [PF00474.19, score=128.2]} {Human: ENSG00000262217, SLC5A8, solute carrier family 5 member 8, [Score=373, Expect=2e-120]; ENSG00000256870, SLC5A8, solute carrier family 5 member 8, [Score=373, Expect=2e-120]; ENSG00000138074, SLC5A6, solute carrier family 5 member 6, [Score=367, Expect=2e-117]; ENSG00000148942, SLC5A12, solute carrier family 5 member 12, [Score=358, Expect=1e-114]} {Mouse: ENSMUSG00000020062, Slc5a8, solute carrier family 5 (iodide transporter), member 8, [Score=377, Expect=6e-122]; ENSMUSG00000041644, Slc5a12, solute carrier family 5 (sodium/glucose cotransporter), member 12, [Score=363, Expect=2e-116]} {Dmel: FBgn0034494, CG10444, [Score=330, Expect=2e-104]} {Celegans: WBGene00014092, ZK822.5, [Score=226, Expect=2e-65]} {Smed: dd_Smed_v6_14173_0_1, dd_Smed_v6_14173_0_1, [Score=345, Expect=2e-110]} {RNA1509_1120} {RNA1310_5768} {RNA815_1831}
5. MligTC455_23228 1772 36.92 Mlig455_004555

Neo: -

Age: -

Region-enriched R3: 1.605/0.00005

0.961 - - - - 0.961 - Mlig455_004555 {REF} {Length: 1688} {TRANSSPLICED} {RNA1509_12452, RNA1509_28256} {RNA1310_32627, RNA1509_12452} {RNA1509_12452, RNA815_16896}
6. MligTC455_31071 7346 153.04 Mlig455_049657

Neo: Neoblast, stringent

Age: logFC(26M/2M)=0.405

Region-enriched R5: 1.127/0.00000

Regeneration-upregulated TP: 1.115

Regeneration-enriched TP: 1.115

SET 0.957 - - - - - 0.957 Mlig455_049657 {REF} {Length: 1751} {Pfam: Nucleosome assembly protein (NAP) [PF00956.20, score=118.7]} {Human: ENSG00000119335, SET, SET nuclear proto-oncogene, [RH, Score=280, Expect=1e-94]; ENSG00000230667, SETSIP, SET-like protein, [RH, Score=267, Expect=2e-89]} {Mouse: ENSMUSG00000054766, Set, SET nuclear oncogene, [RH, Score=282, Expect=2e-95]} {Dmel: FBgn0014879, Set, [RH, Score=221, Expect=1e-71]} {Celegans: WBGene00005007, spr-2, Suppressor of presenilin-2, [RH, Score=165, Expect=1e-49]} {Smed: dd_Smed_v6_393_0_1, dd_Smed_v6_393_0_1, [RH, Score=219, Expect=1e-71]} {RNA1509_20038} {RNA1310_13639} {RNA815_4883}
7. MligTC455_40236 558 11.62 Mlig455_032441

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.472

Region-enriched R4: 1.677/0.00434
Region-enriched R5: 1.426/0.00139

0.956 - - - - 0.956 - Mlig455_032441 {REF} {Length: 803} {NoTransDecoderORF} {RNA1509_29566} {RNA1310_5412} {RNA815_5585.1}
8. MligTC455_49444 1545 32.19 Mlig455_041799

Neo: Int S/G2/M

Age: Down-Up-Down

Region-enriched R5: 1.110/0.00428

AK6 0.955 - - - - 0.955 - Mlig455_041799 {REF} {Length: 1097} {TRANSSPLICED} {Pfam: AAA domain [PF13238.8, score=92.3]; AAA domain [PF13521.8, score=27.3]; AAA ATPase domain [PF13191.8, score=26.8]; AAA domain [PF13401.8, score=26.1]; RNA helicase [PF00910.24, score=25.4]; AAA domain [PF13207.8, score=23.6]; NTPase [PF03266.17, score=21.6]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=21.3]; AAA domain [PF13671.8, score=20.8]; Viral (Superfamily 1) RNA helicase [PF01443.20, score=19.8]; Parvovirus non-structural protein NS1 [PF01057.19, score=18.0]} {Human: ENSG00000279247, AK6, adenylate kinase 6, [RH, Score=186, Expect=2e-60]; ENSG00000085231, AK6, adenylate kinase 6, [RH, Score=186, Expect=2e-60]} {Mouse: ENSMUSG00000078941, Ak6, adenylate kinase 6, [RH, Score=194, Expect=1e-63]} {Dmel: FBgn0033754, Ak6, Adenylate kinase 6, [RH, Score=168, Expect=1e-53]} {Celegans: WBGene00008458, E02H1.6, Adenylate kinase isoenzyme 6 homolog, [RH, Score=172, Expect=3e-55]} {Smed: dd_Smed_v6_9332_0_1, dd_Smed_v6_9332_0_1, [RH, Score=185, Expect=2e-60]} {RNA1509_20178, RNA1509_3049} {RNA1310_31173.2, RNA1509_20178} {RNA1509_20178, RNA815_14839}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA