Data search
Results for MligTC455_53930
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_53930 | 199 | 4.15 | Mlig455_009109 | Neo: - Age: Down-Down-Up Region-enriched R3: 3.244/0.00532 |
FGA | Mlig455_009109 {REF} {Length: 3124} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=106.3]} {Human: ENSG00000171560, FGA, fibrinogen alpha chain, [Score=99.0, Expect=8e-21]} {Mouse: ENSMUSG00000028001, Fga, fibrinogen alpha chain, [Score=96.3, Expect=3e-20]} {Dmel: FBgn0003326, sca, scabrous, [Score=86.3, Expect=4e-17]} {Celegans: WBGene00016769, C49C8.5, [RH, Score=67.4, Expect=1e-11]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=92.0, Expect=3e-19]} {RNA1509_48791} {RNA1310_11163, RNA1509_48791} {RNA1509_48791, RNA815_19411} |
Cumulative graph for MligTC455_53930
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -3.097 | 2.605 | 0.99965 | 1.00000 | |
| RegionR2 | 0.032 | 2.605 | 0.75336 | 1.00000 | |
| RegionR3 | 3.244 | 2.605 | 0.00012 | 0.00532 | |
| RegionR4 | 1.771 | 2.605 | 0.14088 | 0.38374 | |
| RegionR5 | 0.036 | 2.605 | 0.74557 | 1.00000 | |
| RegionR6 | 1.228 | 2.605 | 0.28082 | 0.87071 | |
| RegionR7 | 0.916 | 2.605 | 0.48634 | 1.00000 | |
| RegionR8 | -4.129 | 2.605 | 0.99990 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 5.965 | 2.605 | 0.19280 | 0.93143 | |
| RegenerationR2 | 0.513 | 2.605 | 0.49810 | 0.87080 | |
| RegenerationR3 | -1.115 | 2.605 | 0.10335 | 0.51025 | |
| RegenerationR4 | 0.064 | 2.605 | 0.94236 | 1.00000 | |
| RegenerationR5 | 0.488 | 2.605 | 0.55864 | 0.89011 | |
| RegenerationR6 | 0.056 | 2.605 | 0.95384 | 1.00000 | |
| RegenerationBL | -0.805 | 2.605 | 0.91231 | 1.00000 | |
| RegenerationTP | 3.035 | 2.605 | 0.10527 | 0.50231 |
Genes with expression patterns similar to MligTC455_53930
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_53930 | 199 | 4.15 | Mlig455_009109 | Neo: - Age: Down-Down-Up Region-enriched R3: 3.244/0.00532 |
FGA | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_009109 {REF} {Length: 3124} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=106.3]} {Human: ENSG00000171560, FGA, fibrinogen alpha chain, [Score=99.0, Expect=8e-21]} {Mouse: ENSMUSG00000028001, Fga, fibrinogen alpha chain, [Score=96.3, Expect=3e-20]} {Dmel: FBgn0003326, sca, scabrous, [Score=86.3, Expect=4e-17]} {Celegans: WBGene00016769, C49C8.5, [RH, Score=67.4, Expect=1e-11]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=92.0, Expect=3e-19]} {RNA1509_48791} {RNA1310_11163, RNA1509_48791} {RNA1509_48791, RNA815_19411} |
| 2. | MligTC455_21798 | 400 | 8.34 | Mlig455_030373 | Neo: - Age: Up-Down-Down Region-specific R3: 7.095 Region-enriched R3: 6.951/0.00000 |
HMCN2 | 2.403 | 0.709 | 0.952 | - | - | - | 0.742 | Mlig455_030373 {REF} {Length: 4938} {Pfam: WSC domain [PF01822.21, score=501.5]; von Willebrand factor type A domain [PF13519.8, score=70.0]; LCCL domain [PF03815.21, score=47.0]; von Willebrand factor type A domain [PF13768.8, score=44.2]; Histone deacetylation protein Rxt3 [PF08642.12, score=23.7]} {Human: ENSG00000148357, HMCN2, hemicentin 2, [Score=78.6, Expect=1e-13]; ENSG00000143341, HMCN1, hemicentin 1, [Score=75.5, Expect=8e-13]; ENSG00000075035, WSCD2, WSC domain containing 2, [Score=75.5, Expect=5e-13]} {Mouse: ENSMUSG00000055632, Hmcn2, hemicentin 2, [Score=77.8, Expect=1e-13]; ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=77.0, Expect=9e-14]; ENSMUSG00000066842, Hmcn1, hemicentin 1, [Score=76.6, Expect=3e-13]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=57.8, Expect=8e-08]} {Celegans: WBGene00001863, him-4, Hemicentin; High Incidence of Males (Increased X chromosome loss), [Score=92.0, Expect=3e-18]} {Smed: dd_Smed_v6_1161_0_1, dd_Smed_v6_1161_0_1, [Score=93.2, Expect=1e-18]} {RNA1509_14078, RNA1509_51440} {RNA1310_11605.2, RNA1509_51440} {RNA1509_51440, RNA815_1633.1} |
| 3. | MligTC455_21799 | 403 | 8.4 | Mlig455_030420 | Neo: - Age: Up-Down-Down Region-specific R3: 6.931 Region-enriched R3: 6.913/0.00000 |
HMCN2 | 2.402 | 0.709 | 0.952 | - | - | - | 0.741 | Mlig455_030420 {REF} {Length: 1479} {Pfam: WSC domain [PF01822.21, score=113.5]; von Willebrand factor type A domain [PF13519.8, score=34.1]; von Willebrand factor type A domain [PF00092.30, score=27.0]; von Willebrand factor type A domain [PF13768.8, score=20.5]} {Human: ENSG00000148357, HMCN2, hemicentin 2, [Score=79.0, Expect=8e-15]; ENSG00000143341, HMCN1, hemicentin 1, [Score=75.1, Expect=1e-13]} {Mouse: ENSMUSG00000066842, Hmcn1, hemicentin 1, [Score=76.3, Expect=3e-14]} {Celegans: WBGene00001863, him-4, Hemicentin; High Incidence of Males (Increased X chromosome loss), [Score=73.9, Expect=9e-14]} {Smed: dd_Smed_v6_1161_0_1, dd_Smed_v6_1161_0_1, [Score=77.4, Expect=6e-15]} {RNA1509_14078, RNA1509_53874} {RNA1310_11605.2, RNA1509_53874} {RNA1509_53874, RNA815_1633.1} |
| 4. | MligTC455_25739 | 63 | 1.31 | Mlig455_064584 | Neo: - Age: logFC(26M/2M)=0.825 |
0.991 | - | - | - | 0.991 | - | - | Mlig455_064584 {REF} {Length: 2406} {RNA1509_49784} {RNA1310_46444, RNA1509_49784} {RNA1509_49784, RNA815_32725} |
Berezikov Lab - 2020-2021 © ERIBA