TomoSeq data search

Data search

Results for MligTC455_53932

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_53932	408	8.49	Mlig455_058041, Mlig455_058085	Neo: - Age: Down-Up-Up Region-enriched R3: 2.733/0.00027	FGA	Mlig455_058041 {REF} {Length: 2319} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=110.4]} {Human: ENSG00000171560, FGA, fibrinogen alpha chain, [Score=101, Expect=1e-21]} {Mouse: ENSMUSG00000028001, Fga, fibrinogen alpha chain, [Score=99.0, Expect=5e-21]} {Dmel: FBgn0003326, sca, scabrous, [Score=89.4, Expect=3e-18]} {Celegans: WBGene00016769, C49C8.5, [RH, Score=67.4, Expect=1e-11]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=95.5, Expect=2e-20]} {RNA1509_43437} {RNA1310_11163, RNA1509_43437} {RNA1509_43437, RNA815_19411} Mlig455_058085 {REF} {Length: 2504} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=110.4]} {Human: ENSG00000171560, FGA, fibrinogen alpha chain, [Score=101, Expect=1e-21]} {Mouse: ENSMUSG00000028001, Fga, fibrinogen alpha chain, [Score=99.0, Expect=5e-21]} {Dmel: FBgn0003326, sca, scabrous, [Score=89.7, Expect=3e-18]} {Celegans: WBGene00016769, C49C8.5, [RH, Score=67.8, Expect=1e-11]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=95.5, Expect=2e-20]} {RNA1509_43437} {RNA1310_11163} {RNA815_19411}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_53932

408

8.49

Mlig455_058041, Mlig455_058085

Neo: -

Age: Down-Up-Up

Region-enriched R3: 2.733/0.00027

FGA

Mlig455_058041 {REF} {Length: 2319} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=110.4]} {Human: ENSG00000171560, FGA, fibrinogen alpha chain, [Score=101, Expect=1e-21]} {Mouse: ENSMUSG00000028001, Fga, fibrinogen alpha chain, [Score=99.0, Expect=5e-21]} {Dmel: FBgn0003326, sca, scabrous, [Score=89.4, Expect=3e-18]} {Celegans: WBGene00016769, C49C8.5, [RH, Score=67.4, Expect=1e-11]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=95.5, Expect=2e-20]} {RNA1509_43437} {RNA1310_11163, RNA1509_43437} {RNA1509_43437, RNA815_19411}

Mlig455_058085 {REF} {Length: 2504} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=110.4]} {Human: ENSG00000171560, FGA, fibrinogen alpha chain, [Score=101, Expect=1e-21]} {Mouse: ENSMUSG00000028001, Fga, fibrinogen alpha chain, [Score=99.0, Expect=5e-21]} {Dmel: FBgn0003326, sca, scabrous, [Score=89.7, Expect=3e-18]} {Celegans: WBGene00016769, C49C8.5, [RH, Score=67.8, Expect=1e-11]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=95.5, Expect=2e-20]} {RNA1509_43437} {RNA1310_11163} {RNA815_19411}

Cumulative graph for MligTC455_53932

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.675	3.602	0.95873	1.00000
RegionR2	1.129	3.602	0.18447	0.53675
RegionR3	2.733	3.602	0.00000	0.00027
RegionR4	0.125	3.602	0.72505	1.00000
RegionR5	-0.495	3.602	0.93363	1.00000
RegionR6	0.937	3.602	0.22696	0.80906
RegionR7	2.061	3.602	0.00958	0.16719
RegionR8	-5.816	3.602	0.03753	0.38046

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-5.178	3.602	0.39038	1.00000
RegenerationR2	0.211	3.602	0.68173	0.94953
RegenerationR3	0.215	3.602	0.67553	0.93895
RegenerationR4	1.534	3.602	0.00986	0.15025
RegenerationR5	0.348	3.602	0.56536	0.89404
RegenerationR6	0.673	3.602	0.24779	0.59607
RegenerationBL	0.771	3.602	0.55889	0.91410
RegenerationTP	3.084	3.602	0.05585	0.38433

Genes with expression patterns similar to MligTC455_53932

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_53932	408	8.49	Mlig455_058041, Mlig455_058085	Neo: - Age: Down-Up-Up Region-enriched R3: 2.733/0.00027	FGA	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_058041 {REF} {Length: 2319} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=110.4]} {Human: ENSG00000171560, FGA, fibrinogen alpha chain, [Score=101, Expect=1e-21]} {Mouse: ENSMUSG00000028001, Fga, fibrinogen alpha chain, [Score=99.0, Expect=5e-21]} {Dmel: FBgn0003326, sca, scabrous, [Score=89.4, Expect=3e-18]} {Celegans: WBGene00016769, C49C8.5, [RH, Score=67.4, Expect=1e-11]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=95.5, Expect=2e-20]} {RNA1509_43437} {RNA1310_11163, RNA1509_43437} {RNA1509_43437, RNA815_19411} Mlig455_058085 {REF} {Length: 2504} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=110.4]} {Human: ENSG00000171560, FGA, fibrinogen alpha chain, [Score=101, Expect=1e-21]} {Mouse: ENSMUSG00000028001, Fga, fibrinogen alpha chain, [Score=99.0, Expect=5e-21]} {Dmel: FBgn0003326, sca, scabrous, [Score=89.7, Expect=3e-18]} {Celegans: WBGene00016769, C49C8.5, [RH, Score=67.8, Expect=1e-11]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=95.5, Expect=2e-20]} {RNA1509_43437} {RNA1310_11163} {RNA815_19411}
2.	MligTC455_25834	60	1.25	Mlig455_017626	Neo: - Age: -		0.952	-	-	-	0.952	-	-	Mlig455_017626 {REF} {Length: 1448} {NoTransDecoderORF} {RNA1509_48193} {RNA1310_42028.1} {RNA815_22164}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts