Data search
Results for MligTC455_53933
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_53933 | 117 | 2.44 | Mlig455_033549 | Neo: - Age: - |
COL21A1 | Mlig455_033549 {REF} {Length: 4158} {TRANSSPLICED} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=112.6]; C2H2-type zinc finger [PF13894.8, score=54.1]; Zinc finger, C2H2 type [PF00096.28, score=49.9]; Zinc-finger double domain [PF13465.8, score=30.2]} {Human: ENSG00000124749, COL21A1, collagen type XXI alpha 1 chain, [Score=125, Expect=2e-28]; ENSG00000171502, COL24A1, collagen type XXIV alpha 1 chain, [Score=120, Expect=7e-27]; ENSG00000131061, ZNF341, zinc finger protein 341, [Score=119, Expect=9e-27]} {Mouse: ENSMUSG00000059842, Zfp341, zinc finger protein 341, [Score=122, Expect=6e-28]; ENSMUSG00000043719, Col6a6, collagen, type VI, alpha 6, [Score=117, Expect=6e-26]} {Dmel: FBgn0261648, salm, spalt major, [Score=67.8, Expect=6e-11]} {Celegans: WBGene00016154, C27A12.2, [Score=60.1, Expect=7e-09]} {Smed: dd_Smed_v6_6764_0_1, dd_Smed_v6_6764_0_1, [RH, Score=129, Expect=3e-30]} {RNA1509_35180} {RNA1310_3200, RNA1509_35180} {RNA1509_35180, RNA815_10727} |
Cumulative graph for MligTC455_53933
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -8.202 | 2.141 | 0.03558 | 0.46846 | |
| RegionR2 | 2.666 | 2.141 | 0.02072 | 0.15679 | |
| RegionR3 | 1.914 | 2.141 | 0.03524 | 0.32551 | |
| RegionR4 | -0.178 | 2.141 | 0.90851 | 1.00000 | |
| RegionR5 | 1.607 | 2.141 | 0.05222 | 0.19368 | |
| RegionR6 | 2.01 | 2.141 | 0.03055 | 0.32341 | |
| RegionR7 | -0.86 | 2.141 | 0.98412 | 1.00000 | |
| RegionR8 | 1.041 | 2.141 | 0.44850 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 2.162 | 2.141 | 0.99985 | 1.00000 | |
| RegenerationR2 | 0.631 | 2.141 | 0.35350 | 0.78394 | |
| RegenerationR3 | 1.783 | 2.141 | 0.01659 | 0.23554 | |
| RegenerationR4 | 1.722 | 2.141 | 0.03758 | 0.31306 | |
| RegenerationR5 | 0.817 | 2.141 | 0.20404 | 0.63693 | |
| RegenerationR6 | 1.275 | 2.141 | 0.10087 | 0.39364 | |
| RegenerationBL | -3.58 | 2.141 | 0.16854 | 0.49220 | |
| RegenerationTP | 2.504 | 2.141 | 0.03067 | 0.29376 |
Genes with expression patterns similar to MligTC455_53933
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_53933 | 117 | 2.44 | Mlig455_033549 | Neo: - Age: - |
COL21A1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_033549 {REF} {Length: 4158} {TRANSSPLICED} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=112.6]; C2H2-type zinc finger [PF13894.8, score=54.1]; Zinc finger, C2H2 type [PF00096.28, score=49.9]; Zinc-finger double domain [PF13465.8, score=30.2]} {Human: ENSG00000124749, COL21A1, collagen type XXI alpha 1 chain, [Score=125, Expect=2e-28]; ENSG00000171502, COL24A1, collagen type XXIV alpha 1 chain, [Score=120, Expect=7e-27]; ENSG00000131061, ZNF341, zinc finger protein 341, [Score=119, Expect=9e-27]} {Mouse: ENSMUSG00000059842, Zfp341, zinc finger protein 341, [Score=122, Expect=6e-28]; ENSMUSG00000043719, Col6a6, collagen, type VI, alpha 6, [Score=117, Expect=6e-26]} {Dmel: FBgn0261648, salm, spalt major, [Score=67.8, Expect=6e-11]} {Celegans: WBGene00016154, C27A12.2, [Score=60.1, Expect=7e-09]} {Smed: dd_Smed_v6_6764_0_1, dd_Smed_v6_6764_0_1, [RH, Score=129, Expect=3e-30]} {RNA1509_35180} {RNA1310_3200, RNA1509_35180} {RNA1509_35180, RNA815_10727} |
| 2. | MligTC455_18791 | 15 | 0.32 | Mlig455_018772 | Neo: - Age: - |
0.989 | - | - | 0.989 | - | - | - | Mlig455_018772 {REF} {Length: 1316} {RNA1310_18536.1} {RNA815_28798} | |
| 3. | MligTC455_18792 | 13 | 0.28 | Mlig455_018936 | Neo: - Age: - |
0.988 | - | - | 0.988 | - | - | - | Mlig455_018936 {REF} {Length: 1142} {RNA1310_18536.1} {RNA815_28798} | |
| 4. | MligTC455_37007 | 1046 | 21.79 | Mlig455_025758, Mlig455_064376 | Neo: - Age: logFC(26M/2M)=-0.452 Region-enriched R8: 2.557/0.00000 Regeneration-downregulated BL: -3.225 Regeneration-depleted BL: -3.225 |
0.982 | - | - | - | - | 0.982 | - | Mlig455_025758 {REF} {Length: 1194} {Pfam: Neurensin [PF14927.8, score=39.7]; Uncharacterised conserved protein (DUF2371) [PF10177.11, score=21.6]} {RNA1509_51128} {RNA1310_51502.1, RNA1509_51128} {RNA1509_51128, RNA815_17212} Mlig455_064376 {REF} {Length: 1196} {Pfam: Neurensin [PF14927.8, score=41.9]; Uncharacterised conserved protein (DUF2371) [PF10177.11, score=20.6]} {RNA1509_51128} {RNA1310_51502.1} {RNA815_17212} |
|
| 5. | MligTC455_20717 | 964 | 20.08 | Mlig455_010303, Mlig455_010334 | Neo: - Age: - Region-enriched R6: 8.114/0.00000 Regeneration-upregulated TP: 8.019 Regeneration-enriched TP: 8.019 |
0.977 | - | - | - | - | 0.977 | - | Mlig455_010303 {REF} {Length: 1139} {TRANSSPLICED} {Mouse: ENSMUSG00000044581, 4932415D10Rik, RIKEN cDNA 4932415D10 gene, [Score=45.8, Expect=7e-06]} {RNA1509_30258} {RNA1310_41086.1} {RNA815_30011} Mlig455_010334 {REF} {Length: 2409} {Mouse: ENSMUSG00000044581, 4932415D10Rik, RIKEN cDNA 4932415D10 gene, [Score=45.8, Expect=7e-06]} {RNA1509_54865} {RNA1310_41086.1} {RNA815_30011} |
|
| 6. | MligTC455_25181 | 2947 | 61.4 | Mlig455_016583, Mlig455_016639, Mlig455_035594, Mlig455_035605, Mlig455_051883 | Neo: - Age: logFC(26M/2M)=-0.369 Region-enriched R7: 3.379/0.00000 Regeneration-downregulated BL: -3.511 Regeneration-depleted BL: -3.511 |
0.977 | - | - | - | - | 0.977 | - | Mlig455_016583 {REF} {Length: 2083} {Pfam: Calcium-activated potassium channel, beta subunit [PF03185.17, score=45.3]} {Smed: dd_Smed_v6_12880_0_1, dd_Smed_v6_12880_0_1, [Score=82.4, Expect=1e-18]} {RNA1509_22294} {RNA1310_28969} {RNA815_14223} Mlig455_016639 {REF} {Length: 2081} {Pfam: Calcium-activated potassium channel, beta subunit [PF03185.17, score=20.8]} {Smed: dd_Smed_v6_12880_0_1, dd_Smed_v6_12880_0_1, [Score=63.5, Expect=2e-12]} {RNA1509_22294} {RNA1310_28969} {RNA815_14223} Mlig455_035594 {REF} {Length: 986} {Pfam: Calcium-activated potassium channel, beta subunit [PF03185.17, score=46.3]} {Smed: dd_Smed_v6_12880_0_1, dd_Smed_v6_12880_0_1, [Score=82.8, Expect=3e-19]} {RNA1509_50243} {RNA1310_28969} {RNA815_14223} Mlig455_035605 {REF} {Length: 2250} {Pfam: Calcium-activated potassium channel, beta subunit [PF03185.17, score=46.3]} {Smed: dd_Smed_v6_12880_0_1, dd_Smed_v6_12880_0_1, [Score=82.0, Expect=6e-19]} {RNA1509_58072} {RNA1310_28969} {RNA815_14223} Mlig455_051883 {REF} {Length: 914} {Pfam: Calcium-activated potassium channel, beta subunit [PF03185.17, score=45.3]} {Smed: dd_Smed_v6_12880_0_1, dd_Smed_v6_12880_0_1, [Score=82.4, Expect=1e-18]} {RNA1509_50243} {RNA1310_28969} {RNA815_14223} |
|
| 7. | MligTC455_20682 | 20 | 0.41 | Mlig455_005310 | Neo: - Age: - |
0.971 | - | - | - | - | 0.971 | - | Mlig455_005310 {REF} {Length: 1756} {NoTransDecoderORF} {RNA1509_52098, RNA1509_59804} {RNA1310_35910.1, RNA1509_52098} {RNA1509_52098, RNA815_21530} | |
| 8. | MligTC455_22001 | 38 | 0.78 | Mlig455_070600 | Neo: - Age: - |
0.966 | - | - | - | - | 0.966 | - | Mlig455_070600 {REF} {Length: 390} {NoTransDecoderORF} {RNA1509_20978} {RNA1310_12978} {RNA815_21321.1} | |
| 9. | MligTC455_35552 | 32 | 0.67 | Mlig455_035296 | Neo: - Age: - |
SCNN1B | 0.962 | - | - | - | - | 0.962 | - | Mlig455_035296 {REF} {Length: 3475} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=192.5]} {Human: ENSG00000168447, SCNN1B, sodium channel epithelial 1 beta subunit, [Score=64.7, Expect=5e-10]} {Mouse: ENSMUSG00000030873, Scnn1b, sodium channel, nonvoltage-gated 1 beta, [Score=57.8, Expect=4e-08]} {Celegans: WBGene00006832, unc-105, Degenerin-like protein unc-105, [Score=77.0, Expect=2e-14]} {Smed: dd_Smed_v6_22997_0_1, dd_Smed_v6_22997_0_1, [Score=357, Expect=9e-114]} {RNA1509_53211} {RNA1310_6642.3, RNA1509_53211} {RNA1509_53211, RNA815_12322} |
| 10. | MligTC455_21261 | 126 | 2.62 | Mlig455_005134, Mlig455_005175 | Neo: - Age: - |
MFHAS1, SCRIB | 0.961 | - | - | - | - | 0.961 | - | Mlig455_005134 {REF} {Length: 5907} {Pfam: Leucine rich repeat [PF13855.8, score=134.3]; Leucine Rich repeats (2 copies) [PF12799.9, score=105.1]; Leucine Rich Repeat [PF00560.35, score=28.6]; RsmF rRNA methyltransferase first C-terminal domain [PF17126.7, score=20.7]} {Human: ENSG00000180900, SCRIB, scribbled planar cell polarity protein, [Score=164, Expect=1e-40]; ENSG00000274287, SCRIB, scribbled planar cell polarity protein, [Score=164, Expect=1e-40]; ENSG00000033122, LRRC7, leucine rich repeat containing 7, [Score=163, Expect=2e-40]; ENSG00000137269, LRRC1, leucine rich repeat containing 1, [Score=159, Expect=9e-41]} {Mouse: ENSMUSG00000028176, Lrrc7, leucine rich repeat containing 7, [Score=166, Expect=2e-41]; ENSMUSG00000022568, Scrib, scribbled planar cell polarity, [Score=162, Expect=3e-40]} {Dmel: FBgn0033984, Lap1, [Score=152, Expect=2e-37]} {Celegans: WBGene00002632, let-413, [Score=140, Expect=4e-34]} {Smed: dd_Smed_v6_5407_0_1, dd_Smed_v6_5407_0_1, [Score=166, Expect=7e-42]} {RNA1509_38430} {RNA1310_24227} {RNA815_36504} Mlig455_005175 {REF} {Length: 4571} {Pfam: Leucine rich repeat [PF13855.8, score=108.7]; Leucine Rich repeats (2 copies) [PF12799.9, score=93.1]; Leucine Rich Repeat [PF00560.35, score=32.8]; Leucine-rich repeat [PF14580.8, score=18.6]} {Human: ENSG00000147324, MFHAS1, malignant fibrous histiocytoma amplified sequence 1, [Score=143, Expect=3e-34]; ENSG00000285022, AC270282.1, malignant fibrous histiocytoma amplified sequence 1, [Score=143, Expect=3e-34]} {Mouse: ENSMUSG00000070056, Mfhas1, malignant fibrous histiocytoma amplified sequence 1, [Score=137, Expect=2e-32]} {Dmel: FBgn0263289, scrib, scribbled, [Score=122, Expect=7e-28]} {Celegans: WBGene00002632, let-413, [Score=110, Expect=2e-24]} {Smed: dd_Smed_v6_1909_0_1, dd_Smed_v6_1909_0_1, [Score=108, Expect=2e-24]} {RNA1509_38430} {RNA1310_35306} {RNA815_36504} |
| 11. | MligTC455_19452 | 506 | 10.55 | Mlig455_021415 | Neo: - Age: Down-Up-Down |
CLPTM1L | 0.96 | - | - | - | 0.960 | - | - | Mlig455_021415 {REF} {Length: 3183} {TRANSSPLICED} {Pfam: Cleft lip and palate transmembrane protein 1 (CLPTM1) [PF05602.14, score=307.0]} {Human: ENSG00000274811, CLPTM1L, CLPTM1 like, [RH, Score=448, Expect=2e-152]; ENSG00000049656, CLPTM1L, CLPTM1 like, [RH, Score=448, Expect=2e-152]} {Mouse: ENSMUSG00000021610, Clptm1l, CLPTM1-like, [RH, Score=458, Expect=2e-156]} {Dmel: FBgn0030456, CG4332, [RH, Score=418, Expect=1e-140]} {Celegans: WBGene00011761, T13H5.8, [RH, Score=407, Expect=2e-136]} {Smed: dd_Smed_v6_2192_0_1, dd_Smed_v6_2192_0_1, [RH, Score=447, Expect=4e-153]} {RNA1509_42391} {RNA1310_12720.1} {RNA815_4561} |
| 12. | MligTC455_26433 | 15 | 0.31 | Mlig455_013559 | Neo: - Age: - |
0.96 | - | - | - | - | 0.960 | - | Mlig455_013559 {REF} {Length: 1067} {NoTransDecoderORF} {RNA1509_38155} {RNA1310_16376} {RNA815_12881} | |
| 13. | MligTC455_44270 | 91 | 1.9 | Mlig455_009393, Mlig455_036926 | Neo: - Age: - |
EXOC1 | 0.96 | - | - | 0.960 | - | - | - | Mlig455_009393 {REF} {Length: 4392} {Pfam: Exocyst complex component Sec3 [PF09763.11, score=282.1]; Exocyst complex component SEC3 N-terminal PIP2 binding PH [PF15277.8, score=34.2]} {Human: ENSG00000090989, EXOC1, exocyst complex component 1, [Score=308, Expect=3e-91]} {Mouse: ENSMUSG00000036435, Exoc1, exocyst complex component 1, [Score=303, Expect=2e-89]} {Dmel: FBgn0266669, Sec3, Secretory 3, [Score=306, Expect=1e-90]} {Celegans: WBGene00018703, sec-3, Exocyst complex component 1, [Score=239, Expect=7e-67]} {Smed: dd_Smed_v6_6427_0_4, dd_Smed_v6_6427_0_4, [Score=290, Expect=3e-85]} {RNA1509_5055} {RNA1310_14195} {RNA815_1315} Mlig455_036926 {REF} {Length: 4354} {TRANSSPLICED} {Pfam: Exocyst complex component Sec3 [PF09763.11, score=332.3]; Exocyst complex component SEC3 N-terminal PIP2 binding PH [PF15277.8, score=35.6]} {Human: ENSG00000090989, EXOC1, exocyst complex component 1, [RH, Score=336, Expect=9e-101]} {Mouse: ENSMUSG00000036435, Exoc1, exocyst complex component 1, [RH, Score=330, Expect=1e-98]} {Dmel: FBgn0266669, Sec3, Secretory 3, [RH, Score=341, Expect=4e-103]} {Celegans: WBGene00018703, sec-3, Exocyst complex component 1, [RH, Score=251, Expect=1e-70]} {Smed: dd_Smed_v6_6427_0_4, dd_Smed_v6_6427_0_4, [RH, Score=315, Expect=1e-93]} {RNA1509_5055, RNA1509_54407} {RNA1310_4565, RNA1509_5055, RNA1509_54407} {RNA1509_5055, RNA1509_54407, RNA815_1315} |
| 14. | MligTC455_42411 | 5112 | 106.49 | Mlig455_037749, Mlig455_069924 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.305 Region-enriched R7: 2.512/0.00000 Regeneration-downregulated BL: -5.066 Regeneration-depleted BL: -5.066 |
0.959 | - | - | - | - | 0.959 | - | Mlig455_037749 {REF} {Length: 848} {RNA1509_19098} {RNA1310_50833.1} {RNA815_26505} Mlig455_069924 {REF} {Length: 848} {RNA1509_13149, RNA1509_19098} {RNA1310_50833.1, RNA1509_13149, RNA1509_19098} {RNA1509_13149, RNA1509_19098, RNA815_26505} |
|
| 15. | MligTC455_23917 | 45 | 0.94 | Mlig455_009845, Mlig455_010344 | Neo: - Age: - |
DRD2 | 0.958 | - | - | 0.958 | - | - | - | Mlig455_009845 {REF} {Length: 5647} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=67.8]; Transposase protein [PF12017.10, score=23.0]} {Human: ENSG00000149295, DRD2, dopamine receptor D2, [Score=64.3, Expect=6e-10]} {Mouse: ENSMUSG00000032259, Drd2, dopamine receptor D2, [Score=55.1, Expect=3e-07]} {Dmel: FBgn0261929, 5-HT2B, 5-hydroxytryptamine (serotonin) receptor 2B, [Score=69.3, Expect=1e-11]} {Smed: dd_Smed_v6_13509_0_1, dd_Smed_v6_13509_0_1, [Score=163, Expect=1e-42]} {RNA1310_26964} {RNA815_5315} Mlig455_010344 {REF} {Length: 3381} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=68.9]} {Human: ENSG00000149295, DRD2, dopamine receptor D2, [Score=63.2, Expect=6e-10]} {Mouse: ENSMUSG00000032259, Drd2, dopamine receptor D2, [Score=54.3, Expect=2e-07]} {Dmel: FBgn0261929, 5-HT2B, 5-hydroxytryptamine (serotonin) receptor 2B, [Score=73.6, Expect=3e-13]} {Smed: dd_Smed_v6_13509_0_1, dd_Smed_v6_13509_0_1, [Score=165, Expect=1e-44]} {RNA1310_26964} {RNA815_27647} |
| 16. | MligTC455_33267 | 101 | 2.1 | Mlig455_069231 | Neo: - Age: - |
ZFYVE1 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_069231 {REF} {Length: 5589} {TRANSSPLICED} {Pfam: FYVE zinc finger [PF01363.23, score=89.8]} {Human: ENSG00000165861, ZFYVE1, zinc finger FYVE-type containing 1, [Score=425, Expect=1e-135]} {Mouse: ENSMUSG00000042628, Zfyve1, zinc finger, FYVE domain containing 1, [Score=424, Expect=1e-135]} {Dmel: FBgn0051064, CG31064, [Score=55.1, Expect=3e-07]} {Celegans: WBGene00004101, hgrs-1, Hepatocyte Growth factor-Regulated TK Substrate (HRS) family, [Score=55.8, Expect=1e-07]} {Smed: dd_Smed_v6_7922_0_1, dd_Smed_v6_7922_0_1, [Score=311, Expect=1e-93]} {RNA1509_28482, RNA1509_52189} {RNA1310_4737.1, RNA1509_28482, RNA1509_52189} {RNA1509_28482, RNA1509_52189, RNA815_3538} |
| 17. | MligTC455_29148 | 351 | 7.31 | Mlig455_006975 | Neo: - |
0.954 | - | - | - | - | 0.954 | - | Mlig455_006975 {REF} {Length: 2167} {RNA1310_27903} {RNA815_7705.1} | |
| 18. | MligTC455_11479 | 25 | 0.52 | Mlig455_038924 | Neo: - Age: - Regeneration-enriched R3: 7.663 |
AVP | 0.953 | - | - | - | - | 0.953 | - | Mlig455_038924 {REF} {Length: 1513} {Pfam: Neurohypophysial hormones, C-terminal Domain [PF00184.19, score=54.9]} {Human: ENSG00000101200, AVP, arginine vasopressin, [Score=43.5, Expect=7e-06]} {Mouse: ENSMUSG00000037727, Avp, arginine vasopressin, [Score=45.4, Expect=1e-06]} {RNA1509_55830} {RNA1310_49297} {RNA815_9217} |
| 19. | MligTC455_16243 | 108 | 2.26 | Mlig455_063048 | Neo: - Age: - |
0.952 | - | - | - | - | - | 0.952 | Mlig455_063048 {REF} {Length: 2934} {TRANSSPLICED} {RNA1509_56072} {RNA1310_35648.1, RNA1509_56072} {RNA1509_56072, RNA815_22277} | |
| 20. | MligTC455_18114 | 414 | 8.63 | Mlig455_038324, Mlig455_050230 | Neo: - Age: Down-Up-Down |
0.951 | - | - | - | - | 0.951 | - | Mlig455_038324 {REF} {Length: 2163} {Pfam: Transmembrane protein family 72 [PF16054.7, score=60.9]} {Smed: dd_Smed_v6_6789_0_1, dd_Smed_v6_6789_0_1, [RH, Score=94.7, Expect=4e-24]} {RNA1509_37575} {RNA1310_23999} {RNA815_9176.1} Mlig455_050230 {REF} {Length: 2326} {Pfam: Transmembrane protein family 72 [PF16054.7, score=60.9]} {Smed: dd_Smed_v6_6789_0_1, dd_Smed_v6_6789_0_1, [RH, Score=94.7, Expect=4e-24]} {RNA1509_37575} {RNA1310_23999, RNA1509_37575} {RNA1509_37575, RNA815_26984} |
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| 21. | MligTC455_31185 | 18 | 0.37 | Mlig455_044975 | Neo: - Age: - |
0.951 | - | - | - | - | 0.951 | - | Mlig455_044975 {REF} {Length: 682} {RNA1509_38155} {RNA1310_23095} {RNA815_12881} |