TomoSeq data search

Data search

Results for MligTC455_53941

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_53941

764

15.92

Mlig455_015740, Mlig455_049446

Neo: -

Age: -

ZDHHC17

Mlig455_015740 {REF} {Length: 6019} {TRANSSPLICED} {Pfam: DHHC palmitoyltransferase [PF01529.22, score=108.7]; Ankyrin repeats (3 copies) [PF12796.9, score=97.3]; Ankyrin repeats (many copies) [PF13637.8, score=94.6]; Ankyrin repeats (many copies) [PF13857.8, score=81.2]; Ankyrin repeat [PF13606.8, score=69.6]; Ankyrin repeat [PF00023.32, score=66.3]} {Human: ENSG00000186908, ZDHHC17, zinc finger DHHC-type containing 17, [RH, Score=399, Expect=1e-130]} {Mouse: ENSMUSG00000035798, Zdhhc17, zinc finger, DHHC domain containing 17, [RH, Score=400, Expect=7e-131]} {Dmel: FBgn0259824, Hip14, Huntingtin-interacting protein 14, [RH, Score=367, Expect=2e-118]} {Celegans: WBGene00044071, dhhc-14, Palmitoyltransferase, [RH, Score=186, Expect=4e-51]} {Smed: dd_Smed_v6_2983_0_1, dd_Smed_v6_2983_0_1, [RH, Score=463, Expect=4e-156]} {RNA1509_10487} {RNA1310_11376.1, RNA1509_10487} {RNA1509_10487, RNA815_8210}

Mlig455_049446 {REF} {Length: 6829} {TRANSSPLICED} {Pfam: DHHC palmitoyltransferase [PF01529.22, score=108.7]; Ankyrin repeats (many copies) [PF13637.8, score=100.7]; Ankyrin repeats (3 copies) [PF12796.9, score=97.6]; Ankyrin repeats (many copies) [PF13857.8, score=81.5]; Ankyrin repeat [PF13606.8, score=69.9]; Ankyrin repeat [PF00023.32, score=66.6]} {Human: ENSG00000186908, ZDHHC17, zinc finger DHHC-type containing 17, [RH, Score=401, Expect=4e-131]} {Mouse: ENSMUSG00000035798, Zdhhc17, zinc finger, DHHC domain containing 17, [RH, Score=401, Expect=2e-131]} {Dmel: FBgn0259824, Hip14, Huntingtin-interacting protein 14, [RH, Score=369, Expect=5e-119]} {Celegans: WBGene00044071, dhhc-14, Palmitoyltransferase, [RH, Score=187, Expect=2e-51]} {Smed: dd_Smed_v6_2983_0_1, dd_Smed_v6_2983_0_1, [RH, Score=461, Expect=4e-155]} {RNA1509_10487} {RNA1310_11376.2} {RNA815_8210}

Cumulative graph for MligTC455_53941

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	1.113	4.338	0.22832	0.87215
RegionR2	-0.111	4.338	0.78094	1.00000
RegionR3	-0.177	4.338	0.58368	1.00000
RegionR4	1.038	4.338	0.01178	0.06894
RegionR5	-0.022	4.338	0.94201	1.00000
RegionR6	-0.978	4.338	0.00574	0.11789
RegionR7	-0.415	4.338	0.34286	0.97990
RegionR8	-0.447	4.338	0.38020	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.765	4.338	0.24552	0.96633
RegenerationR2	-0.673	4.338	0.04826	0.36300
RegenerationR3	-0.298	4.338	0.44033	0.82746
RegenerationR4	-0.612	4.338	0.12763	0.54219
RegenerationR5	-0.34	4.338	0.34644	0.76154
RegenerationR6	0.047	4.338	0.91478	1.00000
RegenerationBL	-0.058	4.338	0.91237	1.00000
RegenerationTP	-0.484	4.338	0.35868	0.79929

Genes with expression patterns similar to MligTC455_53941

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_53941	764	15.92	Mlig455_015740, Mlig455_049446	Neo: - Age: -	ZDHHC17	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_015740 {REF} {Length: 6019} {TRANSSPLICED} {Pfam: DHHC palmitoyltransferase [PF01529.22, score=108.7]; Ankyrin repeats (3 copies) [PF12796.9, score=97.3]; Ankyrin repeats (many copies) [PF13637.8, score=94.6]; Ankyrin repeats (many copies) [PF13857.8, score=81.2]; Ankyrin repeat [PF13606.8, score=69.6]; Ankyrin repeat [PF00023.32, score=66.3]} {Human: ENSG00000186908, ZDHHC17, zinc finger DHHC-type containing 17, [RH, Score=399, Expect=1e-130]} {Mouse: ENSMUSG00000035798, Zdhhc17, zinc finger, DHHC domain containing 17, [RH, Score=400, Expect=7e-131]} {Dmel: FBgn0259824, Hip14, Huntingtin-interacting protein 14, [RH, Score=367, Expect=2e-118]} {Celegans: WBGene00044071, dhhc-14, Palmitoyltransferase, [RH, Score=186, Expect=4e-51]} {Smed: dd_Smed_v6_2983_0_1, dd_Smed_v6_2983_0_1, [RH, Score=463, Expect=4e-156]} {RNA1509_10487} {RNA1310_11376.1, RNA1509_10487} {RNA1509_10487, RNA815_8210} Mlig455_049446 {REF} {Length: 6829} {TRANSSPLICED} {Pfam: DHHC palmitoyltransferase [PF01529.22, score=108.7]; Ankyrin repeats (many copies) [PF13637.8, score=100.7]; Ankyrin repeats (3 copies) [PF12796.9, score=97.6]; Ankyrin repeats (many copies) [PF13857.8, score=81.5]; Ankyrin repeat [PF13606.8, score=69.9]; Ankyrin repeat [PF00023.32, score=66.6]} {Human: ENSG00000186908, ZDHHC17, zinc finger DHHC-type containing 17, [RH, Score=401, Expect=4e-131]} {Mouse: ENSMUSG00000035798, Zdhhc17, zinc finger, DHHC domain containing 17, [RH, Score=401, Expect=2e-131]} {Dmel: FBgn0259824, Hip14, Huntingtin-interacting protein 14, [RH, Score=369, Expect=5e-119]} {Celegans: WBGene00044071, dhhc-14, Palmitoyltransferase, [RH, Score=187, Expect=2e-51]} {Smed: dd_Smed_v6_2983_0_1, dd_Smed_v6_2983_0_1, [RH, Score=461, Expect=4e-155]} {RNA1509_10487} {RNA1310_11376.2} {RNA815_8210}
2.	MligTC455_50262	320	6.67	Mlig455_019038	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.470	TARBP2	1.886	0.962	-	-	-	-	0.924	Mlig455_019038 {REF} {Length: 1661} {TRANSSPLICED} {Pfam: Double-stranded RNA binding motif [PF00035.28, score=62.0]; Staufen C-terminal domain [PF16482.7, score=26.1]} {Human: ENSG00000139546, TARBP2, TARBP2, RISC loading complex RNA binding subunit, [RH, Score=62.0, Expect=2e-11]} {Mouse: ENSMUSG00000023051, Tarbp2, TARBP2, RISC loading complex RNA binding subunit, [Score=81.6, Expect=1e-17]} {Dmel: FBgn0032515, loqs, loquacious, [RH, Score=121, Expect=2e-30]} {Smed: dd_Smed_v6_9213_0_1, dd_Smed_v6_9213_0_1, [RH, Score=157, Expect=1e-44]} {RNA1509_37226} {RNA1310_1441.1} {RNA815_48096}
3.	MligTC455_41785	1383	28.81	Mlig455_026252, Mlig455_028777, Mlig455_070808	Neo: - Age: Down-Up-Down	TSPAN7	1.715	-	-	0.756	-	-	0.959	Mlig455_026252 {REF} {Length: 1542} {TRANSSPLICED} {Pfam: Tetraspanin family [PF00335.22, score=125.3]} {Human: ENSG00000156298, TSPAN7, tetraspanin 7, [RH, Score=76.6, Expect=2e-15]} {Mouse: ENSMUSG00000030351, Tspan11, tetraspanin 11, [Score=84.0, Expect=2e-18]} {Dmel: FBgn0036769, Tsp74F, Tetraspanin 74F, [Score=73.9, Expect=5e-15]} {Celegans: WBGene00006643, tsp-17, TetraSPanin family, [Score=51.6, Expect=2e-07]} {Smed: dd_Smed_v6_13296_0_1, dd_Smed_v6_13296_0_1, [RH, Score=120, Expect=2e-31]} {RNA1509_34180} {RNA1310_20573} {RNA815_8417} Mlig455_028777 {REF} {Length: 1540} {TRANSSPLICED} {Pfam: Tetraspanin family [PF00335.22, score=125.3]} {Human: ENSG00000156298, TSPAN7, tetraspanin 7, [RH, Score=76.6, Expect=2e-15]} {Mouse: ENSMUSG00000030351, Tspan11, tetraspanin 11, [Score=84.0, Expect=2e-18]} {Dmel: FBgn0036769, Tsp74F, Tetraspanin 74F, [Score=73.9, Expect=5e-15]} {Celegans: WBGene00006643, tsp-17, TetraSPanin family, [Score=51.6, Expect=2e-07]} {Smed: dd_Smed_v6_13296_0_1, dd_Smed_v6_13296_0_1, [RH, Score=120, Expect=2e-31]} {RNA1509_34180} {RNA1310_20573, RNA1509_34180} {RNA1509_34180, RNA815_8417} Mlig455_070808 {REF} {Length: 991} {Smed: dd_Smed_v6_13296_0_1, dd_Smed_v6_13296_0_1, [Score=40.0, Expect=9e-06]} {RNA1509_34180} {RNA1310_20573} {RNA815_8417}
4.	MligTC455_30862	467	9.73	Mlig455_059658	Neo: Irradiation Age: logFC(26M/2M)=0.816		1.687	0.972	-	-	-	-	0.715	Mlig455_059658 {REF} {Length: 1634} {RNA1509_1044, RNA1509_37966} {RNA1310_8938, RNA1509_37966} {RNA1509_37966, RNA815_5260}
5.	MligTC455_50263	574	11.97	Mlig455_055664	Neo: - Age: Down-Down-Up	TARBP2	0.964	0.964	-	-	-	-	-	Mlig455_055664 {REF} {Length: 1663} {TRANSSPLICED} {Pfam: Double-stranded RNA binding motif [PF00035.28, score=62.0]; Staufen C-terminal domain [PF16482.7, score=26.1]} {Human: ENSG00000139546, TARBP2, TARBP2, RISC loading complex RNA binding subunit, [RH, Score=62.0, Expect=2e-11]} {Mouse: ENSMUSG00000023051, Tarbp2, TARBP2, RISC loading complex RNA binding subunit, [Score=81.6, Expect=1e-17]} {Dmel: FBgn0032515, loqs, loquacious, [RH, Score=121, Expect=2e-30]} {Smed: dd_Smed_v6_9213_0_1, dd_Smed_v6_9213_0_1, [RH, Score=157, Expect=1e-44]} {RNA1509_37226} {RNA1310_1441.1, RNA1509_37226} {RNA1509_37226, RNA815_48096}
6.	MligTC455_45373	524	10.91	Mlig455_053732	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.395	GATAD1	0.963	0.963	-	-	-	-	-	Mlig455_053732 {REF} {Length: 1233} {TRANSSPLICED} {Human: ENSG00000157259, GATAD1, GATA zinc finger domain containing 1, [RH, Score=97.1, Expect=5e-23]} {Mouse: ENSMUSG00000007415, Gatad1, GATA zinc finger domain containing 1, [RH, Score=97.8, Expect=2e-23]} {Dmel: FBgn0025634, CG13367, [RH, Score=72.0, Expect=6e-14]} {RNA1509_36175, RNA1509_55275} {RNA1310_26687, RNA1509_55275} {RNA1509_55275, RNA815_32643}
7.	MligTC455_29193	967	20.15	Mlig455_018315, Mlig455_061014, Mlig455_067207	Neo: - Age: Down-Down-Up		0.961	0.961	-	-	-	-	-	Mlig455_018315 {REF} {Length: 2676} {TRANSSPLICED} {RNA1509_52931} {RNA1310_28021} {RNA815_28552} Mlig455_061014 {REF} {Length: 2001} {RNA1310_29654.1} {RNA815_17301.1} Mlig455_067207 {REF} {Length: 584} {TRANSSPLICED} {RNA1310_29654.1} {RNA815_17301.1}
8.	MligTC455_18710	1882	39.21	Mlig455_013131	Neo: - Age: -	UNK	0.956	0.956	-	-	-	-	-	Mlig455_013131 {REF} {Length: 4048} {TRANSSPLICED} {Pfam: Unkempt Zinc finger domain 1 (Znf1) [PF18384.3, score=63.3]; Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=29.4]} {Human: ENSG00000132478, UNK, unkempt family zinc finger, [Score=375, Expect=1e-118]} {Mouse: ENSMUSG00000020770, Unk, unkempt family zinc finger, [Score=375, Expect=6e-119]} {Dmel: FBgn0004395, unk, unkempt, [Score=362, Expect=1e-116]} {Celegans: WBGene00016407, C34D10.2, [Score=348, Expect=2e-110]} {Smed: dd_Smed_v6_3128_1_1, dd_Smed_v6_3128_1_1, [Score=401, Expect=3e-130]} {RNA1509_2373, RNA1509_54057} {RNA1310_5315, RNA1509_54057} {RNA1509_54057, RNA815_1951.1}
9.	MligTC455_47461	351	7.31	Mlig455_059023	Neo: - Age: -	KLHDC2	0.955	0.955	-	-	-	-	-	Mlig455_059023 {REF} {Length: 3259} {TRANSSPLICED} {Pfam: Galactose oxidase, central domain [PF13418.8, score=85.8]; Kelch motif [PF13964.8, score=72.1]; Kelch motif [PF13854.8, score=60.0]; Galactose oxidase, central domain [PF13415.8, score=51.1]; Kelch motif [PF07646.17, score=40.8]; Kelch motif [PF01344.27, score=38.8]} {Human: ENSG00000165516, KLHDC2, kelch domain containing 2, [RH, Score=124, Expect=3e-30]} {Mouse: ENSMUSG00000020978, Klhdc2, kelch domain containing 2, [RH, Score=125, Expect=7e-31]} {Dmel: FBgn0040344, CG3711, [Score=62.0, Expect=1e-09]} {Celegans: WBGene00009978, F53E4.1, [Score=59.3, Expect=4e-09]} {Smed: dd_Smed_v6_9892_0_1, dd_Smed_v6_9892_0_1, [RH, Score=96.7, Expect=2e-21]} {RNA1509_12374, RNA1509_47894} {RNA1310_7705.2, RNA1509_12374, RNA1509_47894} {RNA1509_12374, RNA1509_47894, RNA815_5080}
10.	MligTC455_07911	3223	67.15	Mlig455_056355, Mlig455_056368	Neo: - Age: Down-Up-Down		0.953	0.953	-	-	-	-	-	Mlig455_056355 {REF} {Length: 1592} {Pfam: Immediate early response protein (IER) [PF05760.14, score=28.5]} {RNA1509_18831, RNA1509_32087} {RNA1310_34308, RNA1509_32087} {RNA1509_32087, RNA815_15730} Mlig455_056368 {REF} {Length: 1599} {Pfam: Immediate early response protein (IER) [PF05760.14, score=24.4]} {RNA1509_18831, RNA1509_36483} {RNA1310_34308, RNA1509_18831, RNA1509_36483} {RNA1509_18831, RNA1509_36483, RNA815_15730}
11.	MligTC455_23364	246	5.12	Mlig455_040785	Neo: - Age: - Region-enriched R5: 1.467/0.01369	WDR90	0.953	0.953	-	-	-	-	-	Mlig455_040785 {REF} {Length: 6671} {Pfam: WD domain, G-beta repeat [PF00400.34, score=69.7]; Protein of unknown function (DUF667) [PF05018.15, score=57.9]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=28.9]} {Human: ENSG00000161996, WDR90, WD repeat domain 90, [Score=600, Expect=0.0]} {Mouse: ENSMUSG00000073434, Wdr90, WD repeat domain 90, [Score=593, Expect=1e-179]} {Dmel: FBgn0010356, Taf5, TBP-associated factor 5, [Score=51.6, Expect=8e-06]} {Smed: dd_Smed_v6_2585_0_1, dd_Smed_v6_2585_0_1, [Score=54.3, Expect=6e-07]} {RNA1509_25510, RNA1509_53216} {RNA1310_17741, RNA1509_53216} {RNA1509_53216, RNA815_47812}
12.	MligTC455_24765	271	5.66	Mlig455_049113	Neo: - Age: -	CABLES1	0.952	0.952	-	-	-	-	-	Mlig455_049113 {REF} {Length: 2278} {Pfam: Cyclin, N-terminal domain [PF00134.25, score=19.1]} {Human: ENSG00000134508, CABLES1, Cdk5 and Abl enzyme substrate 1, [Score=184, Expect=7e-54]} {Mouse: ENSMUSG00000040957, Cables1, CDK5 and Abl enzyme substrate 1, [Score=184, Expect=7e-52]} {Dmel: FBgn0027581, CG6191, [Score=198, Expect=3e-56]} {Celegans: WBGene00022128, Y71F9B.6, [Score=92.0, Expect=2e-21]} {Smed: dd_Smed_v6_8669_0_1, dd_Smed_v6_8669_0_1, [Score=210, Expect=7e-64]} {RNA1509_48203} {RNA1310_36119.1} {RNA815_6575.1}
13.	MligTC455_29052	594	12.38	Mlig455_009595	Neo: - Age: -	PKM	0.952	-	-	-	-	-	0.952	Mlig455_009595 {REF} {Length: 3210} {TRANSSPLICED} {Pfam: Pyruvate kinase, barrel domain [PF00224.23, score=302.0]; Pyruvate kinase, alpha/beta domain [PF02887.18, score=107.9]} {Human: ENSG00000067225, PKM, pyruvate kinase M1/2, [Score=385, Expect=1e-126]} {Mouse: ENSMUSG00000032294, Pkm, pyruvate kinase, muscle, [Score=383, Expect=4e-126]} {Dmel: FBgn0267385, PyK, Pyruvate kinase, [Score=415, Expect=8e-139]} {Celegans: WBGene00014001, pyk-2, Pyruvate kinase, [Score=380, Expect=3e-125]} {Smed: dd_Smed_v6_1511_0_1, dd_Smed_v6_1511_0_1, [RH, Score=535, Expect=0.0]} {RNA1509_10484} {RNA1310_12334.1} {RNA815_4151.1}
14.	MligTC455_50407	1251	26.05	Mlig455_014849	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.262	ALDH7A1	0.952	-	-	-	-	-	0.952	Mlig455_014849 {REF} {Length: 2703} {TRANSSPLICED} {Pfam: Aldehyde dehydrogenase family [PF00171.24, score=443.4]} {Human: ENSG00000164904, ALDH7A1, aldehyde dehydrogenase 7 family member A1, [RH, Score=661, Expect=0.0]} {Mouse: ENSMUSG00000053644, Aldh7a1, aldehyde dehydrogenase family 7, member A1, [RH, Score=650, Expect=0.0]} {Dmel: FBgn0036857, CG9629, [RH, Score=582, Expect=0.0]} {Celegans: WBGene00000115, alh-9, Putative aldehyde dehydrogenase family 7 member A1 homolog, [RH, Score=652, Expect=0.0]} {Smed: dd_Smed_v6_1493_0_1, dd_Smed_v6_1493_0_1, [RH, Score=644, Expect=0.0]} {RNA1509_20221, RNA1509_20309, RNA1509_33775, RNA1509_3431, RNA1509_3643, RNA1509_37035} {RNA1310_12454, RNA1509_20221, RNA1509_20309, RNA1509_33775, RNA1509_3431, RNA1509_3643, RNA1509_37035} {RNA1509_20221, RNA1509_20309, RNA1509_33775, RNA1509_3431, RNA1509_3643, RNA1509_37035, RNA815_2530}
15.	MligTC455_22247	542	11.29	Mlig455_006232, Mlig455_006293	Neo: - Age: -	SUDS3	0.951	0.951	-	-	-	-	-	Mlig455_006232 {REF} {Length: 3264} {TRANSSPLICED} {Pfam: Sds3-like [PF08598.13, score=47.7]} {Human: ENSG00000111707, SUDS3, SDS3 homolog, SIN3A corepressor complex component, [RH, Score=65.9, Expect=2e-11]} {Mouse: ENSMUSG00000066900, Suds3, suppressor of defective silencing 3 homolog (S. cerevisiae), [RH, Score=65.9, Expect=2e-11]} {RNA1509_23875} {RNA1310_17180} {RNA815_12671} Mlig455_006293 {REF} {Length: 2950} {TRANSSPLICED} {Pfam: Sds3-like [PF08598.13, score=47.7]} {Human: ENSG00000111707, SUDS3, SDS3 homolog, SIN3A corepressor complex component, [RH, Score=65.9, Expect=2e-11]} {Mouse: ENSMUSG00000066900, Suds3, suppressor of defective silencing 3 homolog (S. cerevisiae), [RH, Score=65.9, Expect=2e-11]} {RNA1509_23875} {RNA1310_17180} {RNA815_12671}
16.	MligTC455_36345	702	14.62	Mlig455_003515, Mlig455_015546	Neo: - Age: -		0.951	0.951	-	-	-	-	-	Mlig455_003515 {REF} {Length: 2339} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_30406} {RNA1310_58845} {RNA815_41011} Mlig455_015546 {REF} {Length: 1519} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_30406} {RNA1310_58845} {RNA815_41011}
17.	MligTC455_50574	160	3.34	Mlig455_027140	Neo: - Age: -	RTTN	0.951	0.951	-	-	-	-	-	Mlig455_027140 {REF} {Length: 7063} {TRANSSPLICED} {Human: ENSG00000176225, RTTN, rotatin, [RH, Score=162, Expect=3e-39]} {Mouse: ENSMUSG00000023066, Rttn, rotatin, [Score=155, Expect=4e-37]} {Smed: dd_Smed_v6_13117_0_1, dd_Smed_v6_13117_0_1, [Score=189, Expect=8e-48]} {RNA1509_40573} {RNA1310_417.1} {RNA815_1837}

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