Data search


search
Exact
Search

Results for MligTC455_53949

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_53949 48 1.01 Mlig455_055352

Neo: -

Age: -

CHAF1B Mlig455_055352 {REF} {Length: 2260} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=69.9]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=29.0]} {Human: ENSG00000159259, CHAF1B, chromatin assembly factor 1 subunit B, [RH, Score=340, Expect=7e-110]} {Mouse: ENSMUSG00000022945, Chaf1b, chromatin assembly factor 1, subunit B (p60), [RH, Score=336, Expect=2e-108]} {Dmel: FBgn0033526, Caf1-105, Chromatin assembly factor 1, p105 subunit, [RH, Score=271, Expect=6e-82]} {Celegans: WBGene00022141, chaf-2, CHromatin Assembly Factor, [RH, Score=144, Expect=2e-37]} {Smed: dd_Smed_v6_5543_0_1, dd_Smed_v6_5543_0_1, [RH, Score=315, Expect=4e-101]} {RNA1509_25473} {RNA1310_9688} {RNA815_11424}

Cumulative graph for MligTC455_53949

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.523 0.928 0.99972 1.00000
RegionR2 -0.976 0.928 0.92436 1.00000
RegionR3 0.802 0.928 0.42319 0.94563
RegionR4 3.831 0.928 0.01449 0.08041
RegionR5 1.765 0.928 0.11995 0.34647
RegionR6 -1.924 0.928 0.99951 1.00000
RegionR7 -2.865 0.928 0.99953 1.00000
RegionR8 0.889 0.928 0.57993 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 4.392 0.928 0.48514 1.00000
RegenerationR2 1.05 0.928 0.54553 0.89067
RegenerationR3 1.271 0.928 0.48599 0.85333
RegenerationR4 0.011 0.928 0.92158 1.00000
RegenerationR5 1.094 0.928 0.44589 0.82830
RegenerationR6 4.136 0.928 0.03529 0.23536
RegenerationBL 1.967 0.928 0.31635 0.68293
RegenerationTP -0.152 0.928 0.85982 1.00000


Genes with expression patterns similar to MligTC455_53949

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_53949 48 1.01 Mlig455_055352

Neo: -

Age: -

CHAF1B 2 - 1.000 - 1.000 - - Mlig455_055352 {REF} {Length: 2260} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=69.9]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=29.0]} {Human: ENSG00000159259, CHAF1B, chromatin assembly factor 1 subunit B, [RH, Score=340, Expect=7e-110]} {Mouse: ENSMUSG00000022945, Chaf1b, chromatin assembly factor 1, subunit B (p60), [RH, Score=336, Expect=2e-108]} {Dmel: FBgn0033526, Caf1-105, Chromatin assembly factor 1, p105 subunit, [RH, Score=271, Expect=6e-82]} {Celegans: WBGene00022141, chaf-2, CHromatin Assembly Factor, [RH, Score=144, Expect=2e-37]} {Smed: dd_Smed_v6_5543_0_1, dd_Smed_v6_5543_0_1, [RH, Score=315, Expect=4e-101]} {RNA1509_25473} {RNA1310_9688} {RNA815_11424}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA