TomoSeq data search

Data search

Results for MligTC455_53959

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_53959

151

3.14

Mlig455_024048

Neo: -

Age: -

Region-enriched R5: 1.807/0.03812

KDSR

Mlig455_024048 {REF} {Length: 2525} {TRANSSPLICED} {Pfam: short chain dehydrogenase [PF00106.27, score=116.1]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=68.9]; KR domain [PF08659.12, score=50.1]} {Human: ENSG00000119537, KDSR, 3-ketodihydrosphingosine reductase, [RH, Score=211, Expect=1e-65]} {Mouse: ENSMUSG00000009905, Kdsr, 3-ketodihydrosphingosine reductase, [RH, Score=208, Expect=2e-64]} {Dmel: FBgn0039304, CG10425, [RH, Score=162, Expect=4e-47]} {Celegans: WBGene00021367, Y37E11AM.3, [RH, Score=190, Expect=1e-57]} {Smed: dd_Smed_v6_4976_0_1, dd_Smed_v6_4976_0_1, [RH, Score=198, Expect=4e-61]} {RNA1509_51773} {RNA1310_18196, RNA1509_51773} {RNA1509_51773, RNA815_9562}

Cumulative graph for MligTC455_53959

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	1.971	2.269	0.23216	0.87519
RegionR2	0.92	2.269	0.30123	0.69076
RegionR3	0.84	2.269	0.25614	0.80054
RegionR4	0.202	2.269	0.64950	0.95247
RegionR5	1.807	2.269	0.00566	0.03812
RegionR6	0.588	2.269	0.40778	0.97705
RegionR7	-5.675	2.269	0.01175	0.18929
RegionR8	-0.652	2.269	0.94494	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-5.967	2.269	0.22314	0.95604
RegenerationR2	-0.771	2.269	0.30523	0.74552
RegenerationR3	0.098	2.269	0.90636	1.00000
RegenerationR4	1.017	2.269	0.20576	0.65228
RegenerationR5	0.194	2.269	0.75707	0.97417
RegenerationR6	1.019	2.269	0.20600	0.54842
RegenerationBL	0.977	2.269	0.52737	0.88769
RegenerationTP	2.844	2.269	0.12854	0.54055

Genes with expression patterns similar to MligTC455_53959

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_53959	151	3.14	Mlig455_024048	Neo: - Age: - Region-enriched R5: 1.807/0.03812	KDSR	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_024048 {REF} {Length: 2525} {TRANSSPLICED} {Pfam: short chain dehydrogenase [PF00106.27, score=116.1]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=68.9]; KR domain [PF08659.12, score=50.1]} {Human: ENSG00000119537, KDSR, 3-ketodihydrosphingosine reductase, [RH, Score=211, Expect=1e-65]} {Mouse: ENSMUSG00000009905, Kdsr, 3-ketodihydrosphingosine reductase, [RH, Score=208, Expect=2e-64]} {Dmel: FBgn0039304, CG10425, [RH, Score=162, Expect=4e-47]} {Celegans: WBGene00021367, Y37E11AM.3, [RH, Score=190, Expect=1e-57]} {Smed: dd_Smed_v6_4976_0_1, dd_Smed_v6_4976_0_1, [RH, Score=198, Expect=4e-61]} {RNA1509_51773} {RNA1310_18196, RNA1509_51773} {RNA1509_51773, RNA815_9562}
2.	MligTC455_23793	99	2.07	Mlig455_033726	Neo: - Age: -	CDK6	2.386	0.709	-	-	-	0.952	0.725	Mlig455_033726 {REF} {Length: 2878} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=158.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=91.8]} {Human: ENSG00000105810, CDK6, cyclin dependent kinase 6, [Score=140, Expect=3e-37]; ENSG00000135446, CDK4, cyclin dependent kinase 4, [Score=138, Expect=9e-37]} {Mouse: ENSMUSG00000006728, Cdk4, cyclin-dependent kinase 4, [Score=149, Expect=1e-41]} {Dmel: FBgn0016131, Cdk4, Cyclin-dependent kinase 4, [Score=137, Expect=2e-36]} {Celegans: WBGene00000405, cdk-1, Cyclin-dependent kinase 1, [Score=120, Expect=1e-30]} {Smed: dd_Smed_v6_6179_0_5, dd_Smed_v6_6179_0_5, [Score=135, Expect=3e-36]} {RNA1509_24860} {RNA1310_17562} {RNA815_8098}
3.	MligTC455_37751	204	4.25	Mlig455_014157	Neo: - Age: Up-Down-Down Region-enriched R2: 2.173/0.03490	NWD2	0.976	-	-	0.976	-	-	-	Mlig455_014157 {REF} {Length: 7240} {TRANSSPLICED} {Pfam: AAA ATPase domain [PF13191.8, score=40.0]; NACHT domain [PF05729.14, score=36.6]; Dpy-30 motif [PF05186.15, score=33.2]; AAA domain [PF13401.8, score=32.6]; Domain of unknown function (DUF4062) [PF13271.8, score=22.0]} {Human: ENSG00000174145, NWD2, NACHT and WD repeat domain containing 2, [Score=402, Expect=6e-114]} {Mouse: ENSMUSG00000090061, Nwd2, NACHT and WD repeat domain containing 2, [Score=395, Expect=8e-112]} {Dmel: FBgn0038397, CG10185, [Score=526, Expect=2e-156]} {Celegans: WBGene00020254, T05C3.2, [Score=521, Expect=2e-154]} {Smed: dd_Smed_v6_11085_0_1, dd_Smed_v6_11085_0_1, [Score=292, Expect=2e-79]} {RNA1509_7024} {RNA1310_383.1, RNA1509_7024} {RNA1509_7024, RNA815_188}
4.	MligTC455_42716	464	9.66	Mlig455_045368	Neo: - Age: Down-Down-Up Region-enriched R5: 1.373/0.00197	NUDT6	0.957	-	-	-	-	-	0.957	Mlig455_045368 {REF} {Length: 2152} {TRANSSPLICED} {Pfam: NUDIX domain [PF00293.30, score=61.0]; Nudix hydrolase domain [PF18290.3, score=40.3]} {Human: ENSG00000170917, NUDT6, nudix hydrolase 6, [Score=103, Expect=2e-25]} {Mouse: ENSMUSG00000050174, Nudt6, nudix (nucleoside diphosphate linked moiety X)-type motif 6, [Score=110, Expect=9e-28]} {Dmel: FBgn0030668, CG8128, [RH, Score=125, Expect=1e-33]} {Celegans: WBGene00003578, ndx-1, Putative nudix hydrolase 1, [Score=47.4, Expect=6e-06]} {Smed: dd_Smed_v6_14055_0_1, dd_Smed_v6_14055_0_1, [Score=97.1, Expect=1e-23]} {RNA1509_47695} {RNA1310_29172} {RNA815_14916}
5.	MligTC455_16055	461	9.61	Mlig455_014262	Neo: - Age: -	PGS1	0.95	-	-	-	0.950	-	-	Mlig455_014262 {REF} {Length: 2189} {TRANSSPLICED} {Pfam: PLD-like domain [PF13091.8, score=54.1]; Phospholipase D Active site motif [PF00614.24, score=31.5]} {Human: ENSG00000087157, PGS1, phosphatidylglycerophosphate synthase 1, [RH, Score=275, Expect=4e-86]} {Mouse: ENSMUSG00000017715, Pgs1, phosphatidylglycerophosphate synthase 1, [RH, Score=272, Expect=4e-85]} {Dmel: FBgn0038649, CG7718, [RH, Score=282, Expect=8e-90]} {Celegans: WBGene00021677, pgs-1, CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, [RH, Score=263, Expect=6e-83]} {Smed: dd_Smed_v6_2703_0_1, dd_Smed_v6_2703_0_1, [RH, Score=264, Expect=2e-83]} {RNA1509_24334} {RNA1310_17121, RNA1509_24334} {RNA1509_24334, RNA815_14063}

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