M. lignano Tomo-Seq
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Results for MligTC455_53989

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_53989 666 13.87 Mlig455_019323, Mlig455_019437

Neo: -

Age: logFC(26M/2M)=0.224

Region-enriched R5: 1.691/0.04893

 UBE2E2

Mlig455_019323 {REF} {Length: 2808} {TRANSSPLICED} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=159.6]} {Human: ENSG00000182247, UBE2E2, ubiquitin conjugating enzyme E2 E2, [RH, Score=284, Expect=8e-98]; ENSG00000170035, UBE2E3, ubiquitin conjugating enzyme E2 E3, [RH, Score=280, Expect=5e-96]; ENSG00000170142, UBE2E1, ubiquitin conjugating enzyme E2 E1, [RH, Score=280, Expect=2e-96]} {Mouse: ENSMUSG00000058317, Ube2e2, ubiquitin-conjugating enzyme E2E 2, [RH, Score=284, Expect=7e-98]; ENSMUSG00000027011, Ube2e3, ubiquitin-conjugating enzyme E2E 3, [RH, Score=280, Expect=3e-96]; ENSMUSG00000021774, Ube2e1, ubiquitin-conjugating enzyme E2E 1, [RH, Score=280, Expect=1e-96]} {Dmel: FBgn0015320, Ubc2, Ubiquitin conjugating enzyme 2, [RH, Score=295, Expect=3e-102]} {Celegans: WBGene00002344, let-70, Ubiquitin-conjugating enzyme E2 2, [Score=202, Expect=2e-66]} {Smed: dd_Smed_v6_7817_0_1, dd_Smed_v6_7817_0_1, [RH, Score=239, Expect=3e-80]} {RNA1509_33134} {RNA1310_21418.1} {RNA815_20747.1}

Mlig455_019437 {REF} {Length: 4355} {TRANSSPLICED} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=159.6]} {Human: ENSG00000182247, UBE2E2, ubiquitin conjugating enzyme E2 E2, [RH, Score=284, Expect=8e-98]; ENSG00000170035, UBE2E3, ubiquitin conjugating enzyme E2 E3, [RH, Score=280, Expect=5e-96]; ENSG00000170142, UBE2E1, ubiquitin conjugating enzyme E2 E1, [RH, Score=280, Expect=2e-96]} {Mouse: ENSMUSG00000058317, Ube2e2, ubiquitin-conjugating enzyme E2E 2, [RH, Score=284, Expect=7e-98]; ENSMUSG00000027011, Ube2e3, ubiquitin-conjugating enzyme E2E 3, [RH, Score=280, Expect=3e-96]; ENSMUSG00000021774, Ube2e1, ubiquitin-conjugating enzyme E2E 1, [RH, Score=280, Expect=1e-96]} {Dmel: FBgn0015320, Ubc2, Ubiquitin conjugating enzyme 2, [RH, Score=295, Expect=3e-102]} {Celegans: WBGene00002344, let-70, Ubiquitin-conjugating enzyme E2 2, [Score=202, Expect=2e-66]} {Smed: dd_Smed_v6_7817_0_1, dd_Smed_v6_7817_0_1, [RH, Score=239, Expect=3e-80]} {RNA1509_13742, RNA1509_35155} {RNA1310_21418.1, RNA1509_13742} {RNA1509_13742, RNA815_7268.1}

Cumulative graph for MligTC455_53989

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -8.523 4.124 0.00333 0.18531
RegionR2 1.713 4.124 0.03654 0.22075
RegionR3 0.872 4.124 0.30632 0.84627
RegionR4 0.777 4.124 0.38540 0.71032
RegionR5 1.691 4.124 0.00796 0.04893
RegionR6 1.258 4.124 0.09602 0.56908
RegionR7 1.756 4.124 0.01408 0.21227
RegionR8 0.456 4.124 0.63916 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.937 4.124 0.99988 1.00000
RegenerationR2 -0.138 4.124 0.78242 0.98398
RegenerationR3 0.151 4.124 0.79052 0.97900
RegenerationR4 0.154 4.124 0.77759 0.97963
RegenerationR5 0.429 4.124 0.38845 0.79059
RegenerationR6 0.354 4.124 0.52662 0.82460
RegenerationBL -0.287 4.124 0.64390 0.98231
RegenerationTP 0.667 4.124 0.26788 0.71500


Genes with expression patterns similar to MligTC455_53989

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_53989 666 13.87 Mlig455_019323, Mlig455_019437

Neo: -

Age: logFC(26M/2M)=0.224

Region-enriched R5: 1.691/0.04893

 UBE2E2 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_019323 {REF} {Length: 2808} {TRANSSPLICED} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=159.6]} {Human: ENSG00000182247, UBE2E2, ubiquitin conjugating enzyme E2 E2, [RH, Score=284, Expect=8e-98]; ENSG00000170035, UBE2E3, ubiquitin conjugating enzyme E2 E3, [RH, Score=280, Expect=5e-96]; ENSG00000170142, UBE2E1, ubiquitin conjugating enzyme E2 E1, [RH, Score=280, Expect=2e-96]} {Mouse: ENSMUSG00000058317, Ube2e2, ubiquitin-conjugating enzyme E2E 2, [RH, Score=284, Expect=7e-98]; ENSMUSG00000027011, Ube2e3, ubiquitin-conjugating enzyme E2E 3, [RH, Score=280, Expect=3e-96]; ENSMUSG00000021774, Ube2e1, ubiquitin-conjugating enzyme E2E 1, [RH, Score=280, Expect=1e-96]} {Dmel: FBgn0015320, Ubc2, Ubiquitin conjugating enzyme 2, [RH, Score=295, Expect=3e-102]} {Celegans: WBGene00002344, let-70, Ubiquitin-conjugating enzyme E2 2, [Score=202, Expect=2e-66]} {Smed: dd_Smed_v6_7817_0_1, dd_Smed_v6_7817_0_1, [RH, Score=239, Expect=3e-80]} {RNA1509_33134} {RNA1310_21418.1} {RNA815_20747.1}

Mlig455_019437 {REF} {Length: 4355} {TRANSSPLICED} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=159.6]} {Human: ENSG00000182247, UBE2E2, ubiquitin conjugating enzyme E2 E2, [RH, Score=284, Expect=8e-98]; ENSG00000170035, UBE2E3, ubiquitin conjugating enzyme E2 E3, [RH, Score=280, Expect=5e-96]; ENSG00000170142, UBE2E1, ubiquitin conjugating enzyme E2 E1, [RH, Score=280, Expect=2e-96]} {Mouse: ENSMUSG00000058317, Ube2e2, ubiquitin-conjugating enzyme E2E 2, [RH, Score=284, Expect=7e-98]; ENSMUSG00000027011, Ube2e3, ubiquitin-conjugating enzyme E2E 3, [RH, Score=280, Expect=3e-96]; ENSMUSG00000021774, Ube2e1, ubiquitin-conjugating enzyme E2E 1, [RH, Score=280, Expect=1e-96]} {Dmel: FBgn0015320, Ubc2, Ubiquitin conjugating enzyme 2, [RH, Score=295, Expect=3e-102]} {Celegans: WBGene00002344, let-70, Ubiquitin-conjugating enzyme E2 2, [Score=202, Expect=2e-66]} {Smed: dd_Smed_v6_7817_0_1, dd_Smed_v6_7817_0_1, [RH, Score=239, Expect=3e-80]} {RNA1509_13742, RNA1509_35155} {RNA1310_21418.1, RNA1509_13742} {RNA1509_13742, RNA815_7268.1}
2. MligTC455_25738 310 6.46 Mlig455_040713

Neo: Germline

Age: Up-Up-Down

 1.661 0.700 - - - - 0.961 Mlig455_040713 {REF} {Length: 1962} {RNA1509_24422, RNA1509_49784} {RNA1310_46444, RNA1509_24422} {RNA1509_24422, RNA815_32725}

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