Data search
Results for MligTC455_54004
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_54004 | 19 | 0.40 | Mlig455_025324 | Neo: - Age: - |
Mlig455_025324 {REF} {Length: 2655} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=26.3]} {Mouse: ENSMUSG00000030324, Rho, rhodopsin, [Score=47.8, Expect=1e-05]} {Smed: dd_Smed_v6_20444_0_1, dd_Smed_v6_20444_0_1, [Score=76.6, Expect=3e-15]} {RNA1509_21228} {RNA1310_9066} {RNA815_7856.1} |
Cumulative graph for MligTC455_54004
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -5.481 | 0.734 | 0.99958 | 1.00000 | |
| RegionR2 | 1.979 | 0.734 | 0.10655 | 0.40237 | |
| RegionR3 | 2.838 | 0.734 | 0.02455 | 0.26748 | |
| RegionR4 | 1.807 | 0.734 | 0.33938 | 0.65909 | |
| RegionR5 | 2.041 | 0.734 | 0.05209 | 0.19326 | |
| RegionR6 | 1.624 | 0.734 | 0.07254 | 0.50112 | |
| RegionR7 | -1.99 | 0.734 | 0.99995 | 1.00000 | |
| RegionR8 | -2.817 | 0.734 | 1.00000 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.671 | 0.734 | 0.99985 | 1.00000 | |
| RegenerationR2 | -2.978 | 0.734 | 0.14334 | 0.57456 | |
| RegenerationR3 | -2.23 | 0.734 | 0.32844 | 0.75463 | |
| RegenerationR4 | -0.067 | 0.734 | 0.37225 | 0.79552 | |
| RegenerationR5 | -2.688 | 0.734 | 0.05545 | 0.37753 | |
| RegenerationR6 | -3.331 | 0.734 | 0.07264 | 0.33657 | |
| RegenerationBL | 0.956 | 0.734 | 0.52599 | 0.88643 | |
| RegenerationTP | -0.966 | 0.734 | 0.99988 | 1.00000 |
Genes with expression patterns similar to MligTC455_54004
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_40822 | 53 | 1.1 | Mlig455_041922 | Neo: - Age: Down-Up-Down Region-enriched R5: 3.132/0.04294 |
PARPBP | 1 | - | - | 1.000 | - | - | - | Mlig455_041922 {REF} {Length: 3695} {Human: ENSG00000185480, PARPBP, PARP1 binding protein, [RH, Score=77.8, Expect=2e-15]} {Mouse: ENSMUSG00000035365, Parpbp, PARP1 binding protein, [RH, Score=79.3, Expect=4e-15]} {Smed: dd_Smed_v6_34200_0_1, dd_Smed_v6_34200_0_1, [RH, Score=81.3, Expect=3e-16]} {RNA1509_46952} {RNA1310_6393.1} {RNA815_2577.1} |
| 2. | MligTC455_54004 | 19 | 0.4 | Mlig455_025324 | Neo: - Age: - |
1 | - | - | 1.000 | - | - | - | Mlig455_025324 {REF} {Length: 2655} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=26.3]} {Mouse: ENSMUSG00000030324, Rho, rhodopsin, [Score=47.8, Expect=1e-05]} {Smed: dd_Smed_v6_20444_0_1, dd_Smed_v6_20444_0_1, [Score=76.6, Expect=3e-15]} {RNA1509_21228} {RNA1310_9066} {RNA815_7856.1} | |
| 3. | MligTC455_13408 | 50 | 1.05 | Mlig455_023158, Mlig455_023242 | Neo: - Age: - |
LRRC45 | 0.998 | - | - | 0.998 | - | - | - | Mlig455_023158 {REF} {Length: 4137} {Pfam: Leucine Rich repeat [PF13516.8, score=28.4]; Protein of unknown function (DUF465) [PF04325.15, score=18.7]} {Human: ENSG00000169683, LRRC45, leucine rich repeat containing 45, [Score=259, Expect=3e-77]} {Mouse: ENSMUSG00000025145, Lrrc45, leucine rich repeat containing 45, [Score=256, Expect=3e-76]} {Smed: dd_Smed_v6_9495_0_1, dd_Smed_v6_9495_0_1, [Score=266, Expect=6e-80]} {RNA1509_9663} {RNA1310_9890.1} {RNA815_3417} Mlig455_023242 {REF} {Length: 1433} {Pfam: Leucine Rich repeat [PF13516.8, score=28.4]; Protein of unknown function (DUF465) [PF04325.15, score=18.7]} {Human: ENSG00000169683, LRRC45, leucine rich repeat containing 45, [Score=259, Expect=3e-77]} {Mouse: ENSMUSG00000025145, Lrrc45, leucine rich repeat containing 45, [Score=256, Expect=3e-76]} {Smed: dd_Smed_v6_9495_0_1, dd_Smed_v6_9495_0_1, [Score=266, Expect=6e-80]} {RNA1509_9663} {RNA1310_9890.1} {RNA815_3417} |
| 4. | MligTC455_37563 | 45 | 0.94 | Mlig455_025592, Mlig455_057216, Mlig455_060662 | Neo: - Age: Up-Down-Up |
GALR2, OPN4, TRHR | 0.985 | - | - | 0.985 | - | - | - | Mlig455_025592 {REF} {Length: 4246} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=86.7]; 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=77.2]} {Human: ENSG00000182687, GALR2, galanin receptor 2, [Score=58.5, Expect=8e-09]; ENSG00000174417, TRHR, thyrotropin releasing hormone receptor, [Score=57.8, Expect=1e-08]} {Mouse: ENSMUSG00000026237, Nmur1, neuromedin U receptor 1, [Score=57.8, Expect=9e-09]; ENSMUSG00000020793, Galr2, galanin receptor 2, [Score=55.8, Expect=3e-08]} {Dmel: FBgn0038874, ETHR, [Score=86.7, Expect=3e-18]} {Celegans: WBGene00020586, frpr-18, FLP-2 receptor; FMRFamide Peptide Receptor family, [Score=93.6, Expect=1e-20]} {Smed: dd_Smed_v6_16149_0_1, dd_Smed_v6_16149_0_1, [RH, Score=164, Expect=2e-47]} {RNA1509_10419} {RNA1310_74041} {RNA815_44148} Mlig455_057216 {REF} {Length: 2773} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=87.0]; 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=77.5]} {Human: ENSG00000174417, TRHR, thyrotropin releasing hormone receptor, [Score=57.0, Expect=2e-08]; ENSG00000182687, GALR2, galanin receptor 2, [Score=55.5, Expect=6e-08]} {Mouse: ENSMUSG00000026237, Nmur1, neuromedin U receptor 1, [Score=57.8, Expect=7e-09]} {Dmel: FBgn0038874, ETHR, [Score=86.3, Expect=3e-18]} {Celegans: WBGene00020586, frpr-18, FLP-2 receptor; FMRFamide Peptide Receptor family, [Score=92.0, Expect=2e-20]} {Smed: dd_Smed_v6_16149_0_1, dd_Smed_v6_16149_0_1, [RH, Score=162, Expect=7e-47]} {RNA1509_50426} {RNA1310_74041} {RNA815_44148} Mlig455_060662 {REF} {Length: 1185} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=76.7]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=67.1]} {Human: ENSG00000122375, OPN4, opsin 4, [Score=50.4, Expect=3e-06]; ENSG00000174417, TRHR, thyrotropin releasing hormone receptor, [Score=48.9, Expect=7e-06]} {Dmel: FBgn0029723, Proc-R, Proctolin receptor, [Score=73.9, Expect=4e-14]} {Celegans: WBGene00020586, frpr-18, FLP-2 receptor; FMRFamide Peptide Receptor family, [Score=77.0, Expect=3e-15]} {Smed: dd_Smed_v6_16149_0_1, dd_Smed_v6_16149_0_1, [Score=144, Expect=6e-40]} {RNA1310_74041} {RNA815_42171} |
| 5. | MligTC455_10214 | 30 | 0.61 | Mlig455_011448 | Neo: - Age: - |
0.984 | - | - | 0.984 | - | - | - | Mlig455_011448 {REF} {Length: 1852} {Smed: dd_Smed_v6_13791_0_1, dd_Smed_v6_13791_0_1, [Score=98.2, Expect=1e-24]} {RNA1509_7013} {RNA1310_122132} {RNA815_998.1} | |
| 6. | MligTC455_16876 | 78 | 1.62 | Mlig455_025697 | Neo: Irradiation Age: Up-Down-Down |
RBCK1 | 0.982 | - | - | 0.982 | - | - | - | Mlig455_025697 {REF} {Length: 3925} {Pfam: Zn-finger in Ran binding protein and others [PF00641.20, score=29.6]} {Human: ENSG00000125826, RBCK1, RANBP2-type and C3HC4-type zinc finger containing 1, [Score=55.1, Expect=1e-07]} {RNA1509_38159, RNA1509_38232} {RNA1310_12341.1, RNA1509_38159} {RNA1509_38159, RNA815_19924} |
| 7. | MligTC455_39867 | 78 | 1.62 | Mlig455_037693 | Neo: - Age: - |
CSRP2 | 0.965 | - | - | 0.965 | - | - | - | Mlig455_037693 {REF} {Length: 2259} {Pfam: LIM domain [PF00412.24, score=84.0]} {Human: ENSG00000175183, CSRP2, cysteine and glycine rich protein 2, [RH, Score=156, Expect=4e-48]; ENSG00000159176, CSRP1, cysteine and glycine rich protein 1, [RH, Score=155, Expect=5e-48]; ENSG00000129170, CSRP3, cysteine and glycine rich protein 3, [RH, Score=150, Expect=8e-46]} {Mouse: ENSMUSG00000026421, Csrp1, cysteine and glycine-rich protein 1, [RH, Score=154, Expect=9e-48]; ENSMUSG00000020186, Csrp2, cysteine and glycine-rich protein 2, [RH, Score=154, Expect=1e-47]; ENSMUSG00000030470, Csrp3, cysteine and glycine-rich protein 3, [RH, Score=149, Expect=1e-45]} {Dmel: FBgn0014863, Mlp84B, Muscle LIM protein at 84B, [Score=124, Expect=1e-33]} {Celegans: WBGene00003375, mlp-1, MLP/CRP family (Muscle LIM Protein/Cysteine-rich Protein), [Score=87.4, Expect=9e-23]} {Smed: dd_Smed_v6_373_0_1, dd_Smed_v6_373_0_1, [Score=103, Expect=5e-28]} {RNA1509_22484} {RNA1310_29364, RNA1509_22484} {RNA1509_22484, RNA815_18492.2} |
| 8. | MligTC455_15449 | 384 | 7.99 | Mlig455_043360 | Neo: - Age: - |
0.963 | - | - | 0.963 | - | - | - | Mlig455_043360 {REF} {Length: 1602} {NoTransDecoderORF} {RNA1509_38319} {RNA1310_35989.1} {RNA815_36673} | |
| 9. | MligTC455_43236 | 107 | 2.24 | Mlig455_039667 | Neo: - Age: Down-Down-Up |
CAMKK2 | 0.96 | - | - | 0.960 | - | - | - | Mlig455_039667 {REF} {Length: 2203} {Pfam: Protein kinase domain [PF00069.27, score=200.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=113.0]; Kinase-like [PF14531.8, score=26.6]} {Human: ENSG00000110931, CAMKK2, calcium/calmodulin dependent protein kinase kinase 2, [Score=381, Expect=9e-125]; ENSG00000004660, CAMKK1, calcium/calmodulin dependent protein kinase kinase 1, [Score=364, Expect=2e-118]} {Mouse: ENSMUSG00000029471, Camkk2, calcium/calmodulin-dependent protein kinase kinase 2, beta, [Score=374, Expect=5e-122]; ENSMUSG00000020785, Camkk1, calcium/calmodulin-dependent protein kinase kinase 1, alpha, [Score=359, Expect=1e-116]} {Dmel: FBgn0040056, CG17698, [Score=358, Expect=2e-114]} {Celegans: WBGene00000518, ckk-1, Calcium/calmodulin-dependent protein kinase kinase, [Score=363, Expect=1e-119]} {Smed: dd_Smed_v6_18437_0_1, dd_Smed_v6_18437_0_1, [Score=338, Expect=9e-108]} {RNA1310_35311.1} {RNA815_49857} |
| 10. | MligTC455_03801 | 18 | 0.38 | Mlig455_017135 | Neo: - Age: - |
0.959 | - | - | 0.959 | - | - | - | Mlig455_017135 {REF} {Length: 441} {NoTransDecoderORF} {RNA1509_33446} {RNA1310_9913} {RNA815_13562.1} | |
| 11. | MligTC455_10375 | 17 | 0.35 | Mlig455_066826 | Neo: - Age: - |
0.953 | - | - | 0.953 | - | - | - | Mlig455_066826 {REF} {Length: 668} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_59624} {RNA1310_65491} {RNA815_10554.1} | |
| 12. | MligTC455_13657 | 19 | 0.4 | Mlig455_060044 | Neo: - Age: - |
0.952 | - | - | 0.952 | - | - | - | Mlig455_060044 {REF} {Length: 2651} {RNA1310_18636.3} {RNA815_34525} | |
| 13. | MligTC455_34293 | 173 | 3.6 | Mlig455_064165 | Neo: - Age: - |
SLC35A1 | 0.951 | - | - | 0.951 | - | - | - | Mlig455_064165 {REF} {Length: 2625} {TRANSSPLICED} {Pfam: Nucleotide-sugar transporter [PF04142.17, score=339.6]; UAA transporter family [PF08449.13, score=27.4]; EamA-like transporter family [PF00892.22, score=27.2]} {Human: ENSG00000164414, SLC35A1, solute carrier family 35 member A1, [Score=244, Expect=2e-78]; ENSG00000102100, SLC35A2, solute carrier family 35 member A2, [Score=239, Expect=2e-75]} {Mouse: ENSMUSG00000028293, Slc35a1, solute carrier family 35 (CMP-sialic acid transporter), member 1, [Score=241, Expect=2e-77]; ENSMUSG00000031156, Slc35a2, solute carrier family 35 (UDP-galactose transporter), member A2, [Score=240, Expect=2e-76]} {Dmel: FBgn0024994, Csat, [Score=259, Expect=3e-84]} {Celegans: WBGene00015404, nstp-4, Nucleotide Sugar TransPorter family, [Score=205, Expect=1e-63]} {Smed: dd_Smed_v6_4691_0_1, dd_Smed_v6_4691_0_1, [Score=268, Expect=2e-88]} {RNA1509_28649} {RNA1310_9196.1} {RNA815_6385} |