TomoSeq data search

Data search

Results for MligTC455_54037

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_54037

198

4.13

Mlig455_023856

Neo: -

Age: -

CBX5

Mlig455_023856 {REF} {Length: 1797} {TRANSSPLICED} {Pfam: Chromo (CHRromatin Organisation MOdifier) domain [PF00385.26, score=70.0]; Chromo shadow domain [PF01393.21, score=61.7]} {Human: ENSG00000094916, CBX5, chromobox 5, [Score=132, Expect=2e-38]; ENSG00000122565, CBX3, chromobox 3, [Score=130, Expect=5e-38]} {Mouse: ENSMUSG00000009575, Cbx5, chromobox 5, [Score=132, Expect=1e-38]; ENSMUSG00000029836, Cbx3, chromobox 3, [Score=130, Expect=3e-38]} {Dmel: FBgn0003607, Su(var)205, Suppressor of variegation 205, [Score=117, Expect=1e-32]} {Celegans: WBGene00001995, hpl-1, HP1 Like (Heterochromatin protein); Heterochromatin protein 1 homolog, [Score=83.6, Expect=4e-20]} {Smed: dd_Smed_v6_928_0_1, dd_Smed_v6_928_0_1, [Score=121, Expect=2e-34]} {RNA1509_58928} {RNA1310_17449, RNA1509_58928} {RNA1509_58928, RNA815_18800.1}

Cumulative graph for MligTC455_54037

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-5.405	2.708	0.22928	0.87304
RegionR2	1.205	2.708	0.23039	0.60278
RegionR3	0.426	2.708	0.63860	1.00000
RegionR4	0.261	2.708	0.74687	1.00000
RegionR5	0.435	2.708	0.62354	0.97833
RegionR6	0.227	2.708	0.75969	1.00000
RegionR7	1.11	2.708	0.29922	0.93385
RegionR8	1.742	2.708	0.12343	0.64517

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.674	2.708	0.99992	1.00000
RegenerationR2	-0.11	2.708	0.85246	1.00000
RegenerationR3	0.992	2.708	0.11958	0.53747
RegenerationR4	1.166	2.708	0.08142	0.45148
RegenerationR5	1.393	2.708	0.01189	0.19263
RegenerationR6	1.725	2.708	0.00727	0.10431
RegenerationBL	-0.381	2.708	0.69165	1.00000
RegenerationTP	-0.433	2.708	0.62730	0.97570

Genes with expression patterns similar to MligTC455_54037

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_54037	198	4.13	Mlig455_023856	Neo: - Age: -	CBX5	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_023856 {REF} {Length: 1797} {TRANSSPLICED} {Pfam: Chromo (CHRromatin Organisation MOdifier) domain [PF00385.26, score=70.0]; Chromo shadow domain [PF01393.21, score=61.7]} {Human: ENSG00000094916, CBX5, chromobox 5, [Score=132, Expect=2e-38]; ENSG00000122565, CBX3, chromobox 3, [Score=130, Expect=5e-38]} {Mouse: ENSMUSG00000009575, Cbx5, chromobox 5, [Score=132, Expect=1e-38]; ENSMUSG00000029836, Cbx3, chromobox 3, [Score=130, Expect=3e-38]} {Dmel: FBgn0003607, Su(var)205, Suppressor of variegation 205, [Score=117, Expect=1e-32]} {Celegans: WBGene00001995, hpl-1, HP1 Like (Heterochromatin protein); Heterochromatin protein 1 homolog, [Score=83.6, Expect=4e-20]} {Smed: dd_Smed_v6_928_0_1, dd_Smed_v6_928_0_1, [Score=121, Expect=2e-34]} {RNA1509_58928} {RNA1310_17449, RNA1509_58928} {RNA1509_58928, RNA815_18800.1}
2.	MligTC455_45647	460	9.59	Mlig455_031757	Neo: - Age: logFC(26M/2M)=-0.233		2.426	-	0.754	0.967	-	-	0.705	Mlig455_031757 {REF} {Length: 2646} {TRANSSPLICED} {RNA1509_19697, RNA1509_48894, RNA1509_51539} {RNA1310_18903.1, RNA1509_19697, RNA1509_48894, RNA1509_51539} {RNA1509_19697, RNA1509_48894, RNA1509_51539, RNA815_19567}
3.	MligTC455_39981	457	9.52	Mlig455_028079	Neo: Int S/G2/M Age: -	MRPL17	0.972	-	-	-	-	0.972	-	Mlig455_028079 {REF} {Length: 1342} {TRANSSPLICED} {Pfam: Ribosomal protein L17 [PF01196.21, score=29.7]} {Human: ENSG00000158042, MRPL17, mitochondrial ribosomal protein L17, [RH, Score=57.4, Expect=3e-10]} {Mouse: ENSMUSG00000030879, Mrpl17, mitochondrial ribosomal protein L17, [RH, Score=57.8, Expect=2e-10]} {Dmel: FBgn0035122, mRpL17, mitochondrial ribosomal protein L17, [RH, Score=67.0, Expect=4e-14]} {Smed: dd_Smed_v6_3289_0_1, dd_Smed_v6_3289_0_1, [RH, Score=105, Expect=1e-28]} {RNA1509_21955, RNA1509_25190} {RNA1310_25456, RNA1509_21955, RNA1509_25190} {RNA1509_21955, RNA1509_25190, RNA815_9956}
4.	MligTC455_29363	1618	33.7	Mlig455_025583, Mlig455_060624	Neo: Int S/G2/M Age: logFC(26M/2M)=0.521 Regeneration-upregulated R6: 1.633 Regeneration-enriched R6: 1.633	HCCS	0.969	-	-	-	-	0.969	-	Mlig455_025583 {REF} {Length: 1669} {TRANSSPLICED} {Pfam: Cytochrome c/c1 heme lyase [PF01265.19, score=230.3]} {Human: ENSG00000004961, HCCS, holocytochrome c synthase, [RH, Score=256, Expect=7e-85]} {Mouse: ENSMUSG00000031352, Hccs, holocytochrome c synthetase, [RH, Score=266, Expect=7e-89]} {Dmel: FBgn0038925, Cchl, Cytochrome c heme lyase, [RH, Score=297, Expect=4e-101]} {Celegans: WBGene00011527, cchl-1, Probable cytochrome c-type heme lyase, [RH, Score=233, Expect=3e-76]} {Smed: dd_Smed_v6_2573_0_1, dd_Smed_v6_2573_0_1, [RH, Score=269, Expect=2e-90]} {RNA1509_4296} {RNA1310_16872} {RNA815_7646.1} Mlig455_060624 {REF} {Length: 1659} {TRANSSPLICED} {Pfam: Cytochrome c/c1 heme lyase [PF01265.19, score=230.3]} {Human: ENSG00000004961, HCCS, holocytochrome c synthase, [RH, Score=256, Expect=7e-85]} {Mouse: ENSMUSG00000031352, Hccs, holocytochrome c synthetase, [RH, Score=266, Expect=7e-89]} {Dmel: FBgn0038925, Cchl, Cytochrome c heme lyase, [RH, Score=297, Expect=4e-101]} {Celegans: WBGene00011527, cchl-1, Probable cytochrome c-type heme lyase, [RH, Score=233, Expect=3e-76]} {Smed: dd_Smed_v6_2573_0_1, dd_Smed_v6_2573_0_1, [RH, Score=269, Expect=2e-90]} {RNA1509_17106, RNA1509_37169, RNA1509_4296} {RNA1310_16872, RNA1509_17106, RNA1509_37169} {RNA1509_17106, RNA1509_37169, RNA815_7646.1}
5.	MligTC455_41857	148	3.08	Mlig455_037828	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.788	BRD8	0.969	-	-	0.969	-	-	-	Mlig455_037828 {REF} {Length: 2010} {TRANSSPLICED} {Pfam: Bromodomain [PF00439.27, score=33.1]} {Human: ENSG00000112983, BRD8, bromodomain containing 8, [Score=69.3, Expect=9e-12]} {Mouse: ENSMUSG00000003778, Brd8, bromodomain containing 8, [Score=69.3, Expect=7e-12]} {Dmel: FBgn0050417, tbrd-3, testis-specifically expressed bromodomain containing protein-3, [Score=47.8, Expect=1e-05]} {Smed: dd_Smed_v6_10362_1_1, dd_Smed_v6_10362_1_1, [RH, Score=57.0, Expect=1e-08]} {RNA1509_27181} {RNA1310_17527} {RNA815_26572}
6.	MligTC455_52562	500	10.41	Mlig455_069002	Neo: - Age: -	ARIH1	0.962	-	-	-	-	0.962	-	Mlig455_069002 {REF} {Length: 3293} {Pfam: Ariadne domain [PF19422.1, score=39.3]; IBR domain, a half RING-finger domain [PF01485.23, score=33.2]} {Human: ENSG00000166233, ARIH1, ariadne RBR E3 ubiquitin protein ligase 1, [Score=199, Expect=5e-61]} {Mouse: ENSMUSG00000025234, Arih1, ariadne RBR E3 ubiquitin protein ligase 1, [Score=199, Expect=8e-62]} {Dmel: FBgn0017418, ari-1, ariadne 1, [Score=205, Expect=3e-64]} {Celegans: WBGene00016158, ari-1, ARI (Ubiquitin ligase Ariadne) homolog, [Score=191, Expect=4e-59]} {Smed: dd_Smed_v6_4224_0_1, dd_Smed_v6_4224_0_1, [Score=210, Expect=4e-66]} {RNA1509_9820} {RNA1310_13675} {RNA815_11154}
7.	MligTC455_21153	1730	36.05	Mlig455_033791, Mlig455_033841	Neo: Int S/G2/M Age: -	ACTL6A	0.96	-	-	-	-	0.960	-	Mlig455_033791 {REF} {Length: 2069} {TRANSSPLICED} {Pfam: Actin [PF00022.21, score=435.4]; MreB/Mbl protein [PF06723.15, score=18.4]} {Human: ENSG00000136518, ACTL6A, actin like 6A, [RH, Score=461, Expect=1e-160]; ENSG00000077080, ACTL6B, actin like 6B, [RH, Score=450, Expect=3e-156]} {Mouse: ENSMUSG00000027671, Actl6a, actin-like 6A, [RH, Score=460, Expect=3e-160]; ENSMUSG00000029712, Actl6b, actin-like 6B, [RH, Score=445, Expect=1e-154]} {Dmel: FBgn0025716, Bap55, Brahma associated protein 55kD, [RH, Score=449, Expect=2e-156]} {Celegans: WBGene00022774, swsn-6, SWI/SNF nucleosome remodeling complex component, [RH, Score=416, Expect=3e-143]} {Smed: dd_Smed_v6_2794_0_1, dd_Smed_v6_2794_0_1, [RH, Score=458, Expect=3e-160]} {RNA1509_8540} {RNA1310_1131} {RNA815_9002} Mlig455_033841 {REF} {Length: 2199} {TRANSSPLICED} {Pfam: Actin [PF00022.21, score=434.0]; MreB/Mbl protein [PF06723.15, score=18.5]} {Human: ENSG00000136518, ACTL6A, actin like 6A, [RH, Score=459, Expect=9e-160]; ENSG00000077080, ACTL6B, actin like 6B, [RH, Score=448, Expect=2e-155]} {Mouse: ENSMUSG00000027671, Actl6a, actin-like 6A, [RH, Score=458, Expect=1e-159]; ENSMUSG00000029712, Actl6b, actin-like 6B, [RH, Score=444, Expect=2e-154]} {Dmel: FBgn0025716, Bap55, Brahma associated protein 55kD, [RH, Score=448, Expect=6e-156]} {Celegans: WBGene00022774, swsn-6, SWI/SNF nucleosome remodeling complex component, [RH, Score=414, Expect=1e-142]} {Smed: dd_Smed_v6_2794_0_1, dd_Smed_v6_2794_0_1, [RH, Score=456, Expect=2e-159]} {RNA1509_10754, RNA1509_8540} {RNA1310_1131, RNA1509_10754, RNA1509_8540} {RNA1509_10754, RNA1509_8540, RNA815_9002}
8.	MligTC455_52561	506	10.55	Mlig455_034297	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.318	ARIH1	0.959	-	-	-	-	0.959	-	Mlig455_034297 {REF} {Length: 4225} {TRANSSPLICED} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=60.4]; Ariadne domain [PF19422.1, score=47.5]} {Human: ENSG00000166233, ARIH1, ariadne RBR E3 ubiquitin protein ligase 1, [RH, Score=437, Expect=1e-147]} {Mouse: ENSMUSG00000025234, Arih1, ariadne RBR E3 ubiquitin protein ligase 1, [RH, Score=437, Expect=6e-148]} {Dmel: FBgn0017418, ari-1, ariadne 1, [RH, Score=444, Expect=2e-151]} {Celegans: WBGene00016158, ari-1, ARI (Ubiquitin ligase Ariadne) homolog, [RH, Score=405, Expect=2e-136]} {Smed: dd_Smed_v6_4224_0_1, dd_Smed_v6_4224_0_1, [RH, Score=454, Expect=2e-155]} {RNA1509_24929, RNA1509_9820} {RNA1310_13675, RNA1509_24929, RNA1509_9820} {RNA1509_24929, RNA1509_9820, RNA815_11154}
9.	MligTC455_52560	503	10.49	Mlig455_034260	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.847	ARIH1	0.958	-	-	-	-	0.958	-	Mlig455_034260 {REF} {Length: 5125} {TRANSSPLICED} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=60.4]; Ariadne domain [PF19422.1, score=47.6]} {Human: ENSG00000166233, ARIH1, ariadne RBR E3 ubiquitin protein ligase 1, [RH, Score=436, Expect=3e-147]} {Mouse: ENSMUSG00000025234, Arih1, ariadne RBR E3 ubiquitin protein ligase 1, [RH, Score=436, Expect=2e-147]} {Dmel: FBgn0017418, ari-1, ariadne 1, [RH, Score=442, Expect=5e-151]} {Celegans: WBGene00016158, ari-1, ARI (Ubiquitin ligase Ariadne) homolog, [RH, Score=407, Expect=3e-137]} {Smed: dd_Smed_v6_4224_0_1, dd_Smed_v6_4224_0_1, [RH, Score=454, Expect=3e-155]} {RNA1509_23245, RNA1509_46197, RNA1509_9820} {RNA1310_13675, RNA1509_23245, RNA1509_46197} {RNA1509_23245, RNA1509_46197, RNA815_11154}
10.	MligTC455_09723	43	0.89	Mlig455_048052, Mlig455_048071	Neo: - Age: Up-Down-Down		0.955	-	-	0.955	-	-	-	Mlig455_048052 {REF} {Length: 3592} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=110.8]; 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=57.6]; Glycine rich protein family [PF07172.13, score=21.2]} {Dmel: FBgn0033579, CG13229, [Score=121, Expect=1e-29]} {Celegans: WBGene00016428, dmsr-7, DroMyoSuppressin Receptor related, [Score=135, Expect=2e-34]} {Smed: dd_Smed_v6_24203_0_1, dd_Smed_v6_24203_0_1, [Score=204, Expect=1e-60]} {RNA1509_18576} {RNA1310_81440} {RNA815_16348} Mlig455_048071 {REF} {Length: 4002} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=110.0]; 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=58.2]; Glycine rich protein family [PF07172.13, score=21.9]} {Dmel: FBgn0033579, CG13229, [Score=119, Expect=5e-29]} {Celegans: WBGene00016428, dmsr-7, DroMyoSuppressin Receptor related, [Score=131, Expect=4e-33]} {Smed: dd_Smed_v6_24203_0_1, dd_Smed_v6_24203_0_1, [Score=202, Expect=8e-60]} {RNA1509_18576} {RNA1310_81440} {RNA815_16348}
11.	MligTC455_54008	399	8.32	Mlig455_013227	Neo: - Age: - Region-enriched R6: 1.943/0.00329	EHD1	0.955	-	-	-	-	0.955	-	Mlig455_013227 {REF} {Length: 3269} {Pfam: Domain of unknown function (DUF5600) [PF18150.3, score=143.1]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=52.4]; Dynamin family [PF00350.25, score=50.9]; 50S ribosome-binding GTPase [PF01926.25, score=37.5]} {Human: ENSG00000110047, EHD1, EH domain containing 1, [Score=660, Expect=0.0]; ENSG00000013016, EHD3, EH domain containing 3, [Score=660, Expect=0.0]; ENSG00000103966, EHD4, EH domain containing 4, [Score=652, Expect=0.0]} {Mouse: ENSMUSG00000024065, Ehd3, EH-domain containing 3, [Score=663, Expect=0.0]; ENSMUSG00000024772, Ehd1, EH-domain containing 1, [Score=659, Expect=0.0]; ENSMUSG00000107039, Ehd1, EH-domain containing 1, [Score=659, Expect=0.0]; ENSMUSG00000027293, Ehd4, EH-domain containing 4, [Score=651, Expect=0.0]} {Dmel: FBgn0016693, Past1, Putative Achaete Scute Target 1, [Score=688, Expect=0.0]} {Celegans: WBGene00004373, rme-1, Receptor Mediated Endocytosis; Receptor-mediated endocytosis 1 isoform I, [Score=676, Expect=0.0]} {Smed: dd_Smed_v6_3148_0_1, dd_Smed_v6_3148_0_1, [Score=703, Expect=0.0]} {RNA1509_6487} {RNA1310_8475} {RNA815_5849.1}
12.	MligTC455_10375	17	0.35	Mlig455_066826	Neo: - Age: -		0.954	-	-	0.954	-	-	-	Mlig455_066826 {REF} {Length: 668} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_59624} {RNA1310_65491} {RNA815_10554.1}
13.	MligTC455_22190	155	3.23	Mlig455_037448	Neo: - Age: Down-Up-Down		0.953	-	-	0.953	-	-	-	Mlig455_037448 {REF} {Length: 1280} {TRANSSPLICED} {RNA1509_26312} {RNA1310_42598} {RNA815_21773}
14.	MligTC455_34145	304	6.33	Mlig455_070588	Neo: - Age: - Region-enriched R4: 1.809/0.01469		0.953	-	-	-	-	0.953	-	Mlig455_070588 {REF} {Length: 3450} {TRANSSPLICED} {RNA1509_40576} {RNA1310_8602} {RNA815_10261}

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