TomoSeq data search

Data search

Results for MligTC455_54040

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_54040

107

2.24

Mlig455_013018, Mlig455_013046

Neo: -

Age: -

HOXD3

Mlig455_013018 {REF} {Length: 2007} {Pfam: Homeodomain [PF00046.31, score=77.0]} {Human: ENSG00000128652, HOXD3, homeobox D3, [RH, Score=136, Expect=6e-37]; ENSG00000120093, HOXB3, homeobox B3, [RH, Score=130, Expect=5e-35]} {Mouse: ENSMUSG00000079277, Hoxd3, homeobox D3, [RH, Score=135, Expect=2e-36]; ENSMUSG00000079560, Hoxa3, homeobox A3, [RH, Score=132, Expect=2e-35]; ENSMUSG00000048763, Hoxb3, homeobox B3, [RH, Score=130, Expect=1e-34]} {Dmel: FBgn0051481, pb, proboscipedia, [RH, Score=116, Expect=4e-29]} {Celegans: WBGene00003024, lin-39, Homeobox protein lin-39, [RH, Score=95.9, Expect=2e-23]} {Smed: dd_Smed_v6_22992_0_1, dd_Smed_v6_22992_0_1, [Score=110, Expect=4e-28]} {RNA1509_47271} {RNA1310_15265.1} {RNA815_38325}

Mlig455_013046 {REF} {Length: 1934} {Pfam: Homeodomain [PF00046.31, score=76.8]} {Human: ENSG00000128652, HOXD3, homeobox D3, [RH, Score=135, Expect=4e-36]; ENSG00000120093, HOXB3, homeobox B3, [RH, Score=130, Expect=1e-34]; ENSG00000105997, HOXA3, homeobox A3, [RH, Score=129, Expect=1e-33]} {Mouse: ENSMUSG00000079277, Hoxd3, homeobox D3, [RH, Score=133, Expect=1e-35]; ENSMUSG00000079560, Hoxa3, homeobox A3, [RH, Score=130, Expect=2e-34]; ENSMUSG00000048763, Hoxb3, homeobox B3, [RH, Score=129, Expect=3e-34]} {Dmel: FBgn0051481, pb, proboscipedia, [RH, Score=116, Expect=7e-29]} {Celegans: WBGene00003024, lin-39, Homeobox protein lin-39, [RH, Score=95.9, Expect=3e-23]} {Smed: dd_Smed_v6_22992_0_1, dd_Smed_v6_22992_0_1, [Score=112, Expect=1e-28]} {RNA1509_47271} {RNA1310_15265.1} {RNA815_38325}

Cumulative graph for MligTC455_54040

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.716	2.168	1.00000	1.00000
RegionR2	-3.181	2.168	0.99699	1.00000
RegionR3	0.483	2.168	0.64821	1.00000
RegionR4	3.2	2.168	0.11437	0.33593
RegionR5	1.474	2.168	0.29472	0.62799
RegionR6	1.691	2.168	0.24172	0.82711
RegionR7	1.498	2.168	0.36564	1.00000
RegionR8	-3.449	2.168	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.923	2.168	1.00000	1.00000
RegenerationR2	0.24	2.168	0.85424	1.00000
RegenerationR3	0.126	2.168	0.95335	1.00000
RegenerationR4	-0.17	2.168	0.86828	1.00000
RegenerationR5	0.49	2.168	0.76666	0.97802
RegenerationR6	0.48	2.168	0.77758	0.96640
RegenerationBL	1.012	2.168	0.58703	0.93743
RegenerationTP	1.763	2.168	0.47632	0.88537

Genes with expression patterns similar to MligTC455_54040

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_54040	107	2.24	Mlig455_013018, Mlig455_013046	Neo: - Age: -	HOXD3	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_013018 {REF} {Length: 2007} {Pfam: Homeodomain [PF00046.31, score=77.0]} {Human: ENSG00000128652, HOXD3, homeobox D3, [RH, Score=136, Expect=6e-37]; ENSG00000120093, HOXB3, homeobox B3, [RH, Score=130, Expect=5e-35]} {Mouse: ENSMUSG00000079277, Hoxd3, homeobox D3, [RH, Score=135, Expect=2e-36]; ENSMUSG00000079560, Hoxa3, homeobox A3, [RH, Score=132, Expect=2e-35]; ENSMUSG00000048763, Hoxb3, homeobox B3, [RH, Score=130, Expect=1e-34]} {Dmel: FBgn0051481, pb, proboscipedia, [RH, Score=116, Expect=4e-29]} {Celegans: WBGene00003024, lin-39, Homeobox protein lin-39, [RH, Score=95.9, Expect=2e-23]} {Smed: dd_Smed_v6_22992_0_1, dd_Smed_v6_22992_0_1, [Score=110, Expect=4e-28]} {RNA1509_47271} {RNA1310_15265.1} {RNA815_38325} Mlig455_013046 {REF} {Length: 1934} {Pfam: Homeodomain [PF00046.31, score=76.8]} {Human: ENSG00000128652, HOXD3, homeobox D3, [RH, Score=135, Expect=4e-36]; ENSG00000120093, HOXB3, homeobox B3, [RH, Score=130, Expect=1e-34]; ENSG00000105997, HOXA3, homeobox A3, [RH, Score=129, Expect=1e-33]} {Mouse: ENSMUSG00000079277, Hoxd3, homeobox D3, [RH, Score=133, Expect=1e-35]; ENSMUSG00000079560, Hoxa3, homeobox A3, [RH, Score=130, Expect=2e-34]; ENSMUSG00000048763, Hoxb3, homeobox B3, [RH, Score=129, Expect=3e-34]} {Dmel: FBgn0051481, pb, proboscipedia, [RH, Score=116, Expect=7e-29]} {Celegans: WBGene00003024, lin-39, Homeobox protein lin-39, [RH, Score=95.9, Expect=3e-23]} {Smed: dd_Smed_v6_22992_0_1, dd_Smed_v6_22992_0_1, [Score=112, Expect=1e-28]} {RNA1509_47271} {RNA1310_15265.1} {RNA815_38325}
2.	MligTC455_42519	298	6.2	Mlig455_063107	Neo: Neoblast Age: - Regeneration-enriched R4: 3.260 Regeneration-enriched R5: 2.804 Regeneration-enriched R6: 2.553	HES1	2.49	-	-	0.953	-	0.830	0.707	Mlig455_063107 {REF} {Length: 1190} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=39.6]} {Human: ENSG00000114315, HES1, hes family bHLH transcription factor 1, [Score=58.9, Expect=1e-10]} {Mouse: ENSMUSG00000022528, Hes1, hes family bHLH transcription factor 1, [Score=58.5, Expect=1e-10]} {Dmel: FBgn0010109, dpn, deadpan, [Score=64.3, Expect=1e-12]} {Celegans: WBGene00003008, lin-22, Lin-22, [Score=45.8, Expect=1e-06]} {Smed: dd_Smed_v6_17332_0_1, dd_Smed_v6_17332_0_1, [Score=43.9, Expect=6e-06]} {RNA1310_30690} {RNA815_13906}
3.	MligTC455_27168	40	0.82	Mlig455_042314	Neo: - Age: -		1.696	-	-	-	0.730	0.966	-	Mlig455_042314 {REF} {Length: 398} {NoTransDecoderORF} {RNA1509_12443} {RNA1310_15760} {RNA815_80.1}
4.	MligTC455_28963	62	1.3	Mlig455_000858	Neo: - Age: Down-Up-Up, logFC(26M/2M)=2.089 Region-enriched R4: 4.812/0.00497		0.981	-	-	-	-	0.981	-	Mlig455_000858 {REF} {Length: 2247} {Pfam: CUB domain [PF00431.22, score=56.0]} {Mouse: ENSMUSG00000026726, Cubn, cubilin (intrinsic factor-cobalamin receptor), [Score=56.6, Expect=1e-07]} {RNA1509_16377} {RNA1310_33183} {RNA815_39690}
5.	MligTC455_02048	34	0.71	Mlig455_031731	Neo: - Age: -	WDR87	0.975	-	-	-	0.975	-	-	Mlig455_031731 {REF} {Length: 1361} {Pfam: Bcl-2 homology region 4 [PF02180.19, score=37.3]; Outer membrane efflux protein [PF02321.20, score=26.8]; Protein of unknown function (DUF745) [PF05335.15, score=19.1]} {Human: ENSG00000171804, WDR87, WD repeat domain 87, [RH, Score=73.9, Expect=2e-15]}
6.	MligTC455_39457	23	0.49	Mlig455_005623	Neo: - Age: -		0.975	-	-	-	0.975	-	-	Mlig455_005623 {REF} {Length: 1989} {RNA1509_44223} {RNA1310_54802} {RNA815_10441.1}
7.	MligTC455_33701	15	0.3	Mlig455_057984	Neo: - Age: logFC(26M/2M)=2.054		0.974	-	-	-	-	0.974	-	Mlig455_057984 {REF} {Length: 323} {NoTransDecoderORF} {RNA1310_88378}
8.	MligTC455_28417	25	0.52	Mlig455_059156	Neo: - Age: -		0.973	-	-	-	0.973	-	-	Mlig455_059156 {REF} {Length: 1896} {Celegans: WBGene00021498, Y40C7B.1, [Score=48.5, Expect=6e-07]} {RNA1509_5514} {RNA1310_683.1} {RNA815_1542.1}
9.	MligTC455_36219	31	0.65	Mlig455_062394	Neo: - Age: Up-Down-Up	UBL3	0.968	-	-	-	-	0.968	-	Mlig455_062394 {REF} {Length: 2023} {TRANSSPLICED} {Pfam: Ubiquitin-2 like Rad60 SUMO-like [PF13881.8, score=86.4]; Ubiquitin family [PF00240.25, score=19.7]} {Human: ENSG00000122042, UBL3, ubiquitin like 3, [RH, Score=146, Expect=3e-46]} {Mouse: ENSMUSG00000001687, Ubl3, ubiquitin-like 3, [RH, Score=146, Expect=2e-46]} {Dmel: FBgn0026076, UBL3, Ubiquitin like 3, [RH, Score=142, Expect=4e-42]} {Celegans: WBGene00008121, C46F11.6, Ubiquitin-like protein, [RH, Score=118, Expect=2e-35]} {Smed: dd_Smed_v6_10574_0_1, dd_Smed_v6_10574_0_1, [RH, Score=108, Expect=5e-32]} {RNA1509_55576} {RNA1310_14314.1} {RNA815_26271.1}
10.	MligTC455_31179	81	1.69	Mlig455_053149	Neo: - Age: logFC(26M/2M)=0.358 Region-enriched R4: 3.138/0.04541	ANPEP	0.961	-	-	-	-	0.961	-	Mlig455_053149 {REF} {Length: 3495} {Pfam: ERAP1-like C-terminal domain [PF11838.10, score=254.1]; Peptidase family M1 domain [PF01433.22, score=233.5]; Peptidase M1 N-terminal domain [PF17900.3, score=141.3]} {Human: ENSG00000166825, ANPEP, alanyl aminopeptidase, membrane, [Score=546, Expect=7e-179]} {Mouse: ENSMUSG00000039062, Anpep, alanyl (membrane) aminopeptidase, [Score=533, Expect=4e-174]; ENSMUSG00000028024, Enpep, glutamyl aminopeptidase, [Score=507, Expect=4e-164]} {Dmel: FBgn0039640, CG14516, [RH, Score=526, Expect=5e-171]} {Celegans: WBGene00011587, T07F10.1, Aminopeptidase, [Score=395, Expect=1e-121]} {Smed: dd_Smed_v6_6470_0_1, dd_Smed_v6_6470_0_1, [Score=598, Expect=0.0]} {RNA1509_6161} {RNA1310_2955.1} {RNA815_759.2}
11.	MligTC455_48534	110	2.29	Mlig455_008577	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.416	CAPN5	0.951	-	-	-	-	0.951	-	Mlig455_008577 {REF} {Length: 2844} {Pfam: Calpain family cysteine protease [PF00648.23, score=261.8]; Calpain large subunit, domain III [PF01067.24, score=56.4]} {Human: ENSG00000149260, CAPN5, calpain 5, [Score=283, Expect=5e-86]} {Mouse: ENSMUSG00000035547, Capn5, calpain 5, [Score=280, Expect=7e-85]} {Dmel: FBgn0012051, CalpA, Calpain-A, [Score=242, Expect=1e-71]} {Celegans: WBGene00006606, tra-3, Calpain-5, [RH, Score=279, Expect=1e-84]} {Smed: dd_Smed_v6_1971_0_1, dd_Smed_v6_1971_0_1, [Score=222, Expect=4e-63]} {RNA1509_20154} {RNA1310_8058.1, RNA1509_20154} {RNA1509_20154, RNA815_8624}
12.	MligTC455_20478	52	1.08	Mlig455_031423	Neo: - Age: -		0.95	-	-	-	-	0.950	-	Mlig455_031423 {REF} {Length: 1562} {NoTransDecoderORF} {RNA1310_4910}
13.	MligTC455_48926	253	5.27	Mlig455_021971	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.527	GSTZ1	0.95	-	-	-	-	0.950	-	Mlig455_021971 {REF} {Length: 2285} {TRANSSPLICED} {Pfam: Glutathione S-transferase, N-terminal domain [PF13417.8, score=68.3]; Glutathione S-transferase, N-terminal domain [PF02798.22, score=64.0]; Glutathione S-transferase, N-terminal domain [PF13409.8, score=54.8]} {Human: ENSG00000100577, GSTZ1, glutathione S-transferase zeta 1, [RH, Score=231, Expect=7e-77]} {Mouse: ENSMUSG00000021033, Gstz1, glutathione transferase zeta 1 (maleylacetoacetate isomerase), [RH, Score=238, Expect=7e-80]} {Dmel: FBgn0037697, GstZ2, Glutathione S transferase Z2, [RH, Score=230, Expect=1e-76]} {Celegans: WBGene00001790, gst-42, Probable maleylacetoacetate isomerase, [RH, Score=189, Expect=1e-60]} {Smed: dd_Smed_v6_1703_0_1, dd_Smed_v6_1703_0_1, [RH, Score=226, Expect=3e-75]} {RNA1509_16440} {RNA1310_16659.1} {RNA815_19786}

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