Data search
Results for MligTC455_54193
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_54193 | 1153 | 24.03 | Mlig455_020181 | Neo: Neoblast, stringent Age: - Region-enriched R4: 1.737/0.00000 |
GIT2 | Mlig455_020181 {REF} {Length: 4559} {Pfam: G protein-coupled receptor kinase-interacting protein 1 C term [PF12205.10, score=79.9]; Putative GTPase activating protein for Arf [PF01412.20, score=79.7]; Spa2 homology domain (SHD) of GIT [PF08518.13, score=49.1]; RING-type zinc-finger [PF13445.8, score=33.4]; zinc-RING finger domain [PF14634.8, score=27.3]; Ring finger domain [PF13639.8, score=26.3]; Ankyrin repeats (many copies) [PF13857.8, score=25.0]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=24.6]; zinc finger of C3HC4-type, RING [PF15227.8, score=21.0]; Ankyrin repeats (3 copies) [PF12796.9, score=20.5]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=19.3]} {Human: ENSG00000139436, GIT2, GIT ArfGAP 2, [Score=293, Expect=2e-85]; ENSG00000108262, GIT1, GIT ArfGAP 1, [Score=279, Expect=7e-80]} {Mouse: ENSMUSG00000041890, Git2, G protein-coupled receptor kinase-interactor 2, [Score=297, Expect=7e-86]} {Dmel: FBgn0033539, Git, G protein-coupled receptor kinase interacting ArfGAP, [Score=266, Expect=2e-75]} {Celegans: WBGene00008805, git-1, GIT1 (Mammalian G protein-coupled receptor kinase InTeractor 1) homolog, [Score=176, Expect=1e-45]} {Smed: dd_Smed_v6_7569_0_1, dd_Smed_v6_7569_0_1, [Score=297, Expect=3e-85]} {RNA1509_13575} {RNA1310_3732.1} {RNA815_29689} |
Cumulative graph for MligTC455_54193
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.019 | 4.799 | 0.98387 | 1.00000 | |
| RegionR2 | 0.025 | 4.799 | 0.95029 | 1.00000 | |
| RegionR3 | -1.17 | 4.799 | 0.00497 | 0.09469 | |
| RegionR4 | 1.737 | 4.799 | 0.00000 | 0.00000 | |
| RegionR5 | 1.388 | 4.799 | 0.00000 | 0.00004 | |
| RegionR6 | 0.113 | 4.799 | 0.74828 | 1.00000 | |
| RegionR7 | 0.159 | 4.799 | 0.72559 | 1.00000 | |
| RegionR8 | -2.234 | 4.799 | 0.00644 | 0.14602 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.921 | 4.799 | 0.44843 | 1.00000 | |
| RegenerationR2 | -0.185 | 4.799 | 0.61620 | 0.92199 | |
| RegenerationR3 | 1.254 | 4.799 | 0.00266 | 0.09013 | |
| RegenerationR4 | -0.774 | 4.799 | 0.02403 | 0.24824 | |
| RegenerationR5 | 0.05 | 4.799 | 0.87302 | 1.00000 | |
| RegenerationR6 | 0.852 | 4.799 | 0.02112 | 0.18034 | |
| RegenerationBL | 0.922 | 4.799 | 0.07223 | 0.31311 | |
| RegenerationTP | 1.374 | 4.799 | 0.02257 | 0.25534 |
Genes with expression patterns similar to MligTC455_54193
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_54193 | 1153 | 24.03 | Mlig455_020181 | Neo: Neoblast, stringent Age: - Region-enriched R4: 1.737/0.00000 |
GIT2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_020181 {REF} {Length: 4559} {Pfam: G protein-coupled receptor kinase-interacting protein 1 C term [PF12205.10, score=79.9]; Putative GTPase activating protein for Arf [PF01412.20, score=79.7]; Spa2 homology domain (SHD) of GIT [PF08518.13, score=49.1]; RING-type zinc-finger [PF13445.8, score=33.4]; zinc-RING finger domain [PF14634.8, score=27.3]; Ring finger domain [PF13639.8, score=26.3]; Ankyrin repeats (many copies) [PF13857.8, score=25.0]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=24.6]; zinc finger of C3HC4-type, RING [PF15227.8, score=21.0]; Ankyrin repeats (3 copies) [PF12796.9, score=20.5]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=19.3]} {Human: ENSG00000139436, GIT2, GIT ArfGAP 2, [Score=293, Expect=2e-85]; ENSG00000108262, GIT1, GIT ArfGAP 1, [Score=279, Expect=7e-80]} {Mouse: ENSMUSG00000041890, Git2, G protein-coupled receptor kinase-interactor 2, [Score=297, Expect=7e-86]} {Dmel: FBgn0033539, Git, G protein-coupled receptor kinase interacting ArfGAP, [Score=266, Expect=2e-75]} {Celegans: WBGene00008805, git-1, GIT1 (Mammalian G protein-coupled receptor kinase InTeractor 1) homolog, [Score=176, Expect=1e-45]} {Smed: dd_Smed_v6_7569_0_1, dd_Smed_v6_7569_0_1, [Score=297, Expect=3e-85]} {RNA1509_13575} {RNA1310_3732.1} {RNA815_29689} |
| 2. | MligTC455_43593 | 1419 | 29.57 | Mlig455_040044 | Neo: Irradiation Age: logFC(26M/2M)=0.529 Region-enriched R5: 1.148/0.01204 |
CDK1 | 2.712 | 0.855 | - | - | - | 0.969 | 0.888 | Mlig455_040044 {REF} {Length: 1638} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=253.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=124.6]; Haspin like kinase domain [PF12330.10, score=23.0]} {Human: ENSG00000170312, CDK1, cyclin dependent kinase 1, [RH, Score=412, Expect=3e-145]} {Mouse: ENSMUSG00000019942, Cdk1, cyclin-dependent kinase 1, [RH, Score=407, Expect=2e-143]} {Dmel: FBgn0004106, Cdk1, Cyclin-dependent kinase 1, [RH, Score=419, Expect=5e-148]} {Celegans: WBGene00000405, cdk-1, Cyclin-dependent kinase 1, [RH, Score=401, Expect=1e-140]} {Smed: dd_Smed_v6_31502_0_2, dd_Smed_v6_31502_0_2, [RH, Score=413, Expect=2e-145]} {RNA1509_15353, RNA1509_22915} {RNA1310_17831, RNA1509_15353, RNA1509_22915} {RNA1509_15353, RNA1509_22915, RNA815_7489.1} |
| 3. | MligTC455_04048 | 1808 | 37.67 | Mlig455_015386, Mlig455_068768 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.633/0.00046 |
EME1 | 2.49 | - | - | 0.766 | 0.770 | - | 0.954 | Mlig455_015386 {REF} {Length: 1299} {TRANSSPLICED} {Human: ENSG00000154920, EME1, essential meiotic structure-specific endonuclease 1, [RH, Score=132, Expect=1e-33]} {Mouse: ENSMUSG00000039055, Eme1, essential meiotic structure-specific endonuclease 1, [RH, Score=118, Expect=1e-28]} {Dmel: FBgn0033549, mms4, Methyl methanesulfonate sensitivity 4, [RH, Score=87.4, Expect=5e-19]} {RNA1509_44382} {RNA1310_6824} {RNA815_11409.1} Mlig455_068768 {REF} {Length: 1299} {TRANSSPLICED} {Human: ENSG00000154920, EME1, essential meiotic structure-specific endonuclease 1, [RH, Score=132, Expect=1e-33]} {Mouse: ENSMUSG00000039055, Eme1, essential meiotic structure-specific endonuclease 1, [RH, Score=121, Expect=1e-29]} {Dmel: FBgn0033549, mms4, Methyl methanesulfonate sensitivity 4, [RH, Score=87.4, Expect=4e-19]} {RNA1509_11314, RNA1509_44382} {RNA1310_5589.1, RNA1509_11314, RNA1509_44382} {RNA1509_11314, RNA1509_44382, RNA815_11409.1} |
| 4. | MligTC455_21095 | 2187 | 45.56 | Mlig455_045173 | Neo: - Age: - Region-enriched R4: 1.126/0.01219 |
2.418 | 0.749 | - | 0.705 | - | 0.964 | - | Mlig455_045173 {REF} {Length: 1194} {TRANSSPLICED} {Pfam: Hydrolethalus syndrome protein 1 C-terminus [PF15311.8, score=36.9]} {Smed: dd_Smed_v6_13289_0_1, dd_Smed_v6_13289_0_1, [RH, Score=84.0, Expect=5e-19]} {RNA1509_20356, RNA1509_2304} {RNA1310_28845, RNA1509_20356, RNA1509_2304} {RNA1509_20356, RNA1509_2304, RNA815_27698} | |
| 5. | MligTC455_51464 | 987 | 20.56 | Mlig455_030446 | Neo: Int S/G2/M Age: Down-Up-Up Region-enriched R5: 1.161/0.00531 |
MRPL28 | 1.821 | - | - | - | - | 0.954 | 0.867 | Mlig455_030446 {REF} {Length: 991} {TRANSSPLICED} {Human: ENSG00000086504, MRPL28, mitochondrial ribosomal protein L28, [RH, Score=115, Expect=8e-31]} {Mouse: ENSMUSG00000024181, Mrpl28, mitochondrial ribosomal protein L28, [RH, Score=111, Expect=3e-29]} {Celegans: WBGene00020796, mrpl-28, Mitochondrial Ribosomal Protein, Large, [RH, Score=110, Expect=9e-29]} {Smed: dd_Smed_v6_6299_0_1, dd_Smed_v6_6299_0_1, [RH, Score=161, Expect=4e-49]} {RNA1509_12557, RNA1509_28391} {RNA1310_26808, RNA1509_12557, RNA1509_28391} {RNA1509_12557, RNA1509_28391, RNA815_16476} |
| 6. | MligTC455_26396 | 751 | 15.64 | Mlig455_033990 | Neo: - Age: Down-Down-Up |
EEFSEC | 1.715 | - | - | - | - | 0.951 | 0.764 | Mlig455_033990 {REF} {Length: 1992} {TRANSSPLICED} {Pfam: Elongation factor Tu GTP binding domain [PF00009.29, score=98.4]; Elongation factor Tu domain 2 [PF03144.27, score=29.5]; 50S ribosome-binding GTPase [PF01926.25, score=27.3]; Signal recognition particle receptor beta subunit [PF09439.12, score=22.4]; CobW/HypB/UreG, nucleotide-binding domain [PF02492.21, score=18.8]} {Human: ENSG00000132394, EEFSEC, eukaryotic elongation factor, selenocysteine-tRNA specific, [RH, Score=512, Expect=2e-176]; ENSG00000284869, EEFSEC, eukaryotic elongation factor, selenocysteine-tRNA specific, [RH, Score=512, Expect=2e-176]} {Mouse: ENSMUSG00000033216, Eefsec, eukaryotic elongation factor, selenocysteine-tRNA-specific, [RH, Score=515, Expect=8e-178]} {Dmel: FBgn0034627, eEFSec, eukaryotic translation elongation factor, selenocysteine-specific, [RH, Score=431, Expect=5e-146]} {Celegans: WBGene00008133, efsc-1, Eukaryotic Elongation Factor, SelenoCysteine-tRNA-specific, [RH, Score=243, Expect=2e-73]} {Smed: dd_Smed_v6_4481_0_1, dd_Smed_v6_4481_0_1, [RH, Score=489, Expect=3e-168]} {RNA1509_11359, RNA1509_54758} {RNA1310_14020, RNA1509_54758} {RNA1509_54758, RNA815_19208} |
| 7. | MligTC455_39647 | 1875 | 39.07 | Mlig455_021993, Mlig455_022046 | Neo: - Age: logFC(26M/2M)=0.652 |
SF3A3 | 1.683 | - | - | - | - | 0.953 | 0.730 | Mlig455_021993 {REF} {Length: 1884} {TRANSSPLICED} {Pfam: SF3a60/Prp9 C-terminal [PF11931.10, score=183.7]; Replication stress response SDE2 C-terminal [PF13297.8, score=96.5]; Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9 [PF16837.7, score=60.7]; Splicing factor SF3a60 binding domain [PF12108.10, score=28.6]} {Human: ENSG00000183431, SF3A3, splicing factor 3a subunit 3, [RH, Score=629, Expect=0.0]} {Mouse: ENSMUSG00000028902, Sf3a3, splicing factor 3a, subunit 3, [RH, Score=628, Expect=0.0]} {Dmel: FBgn0014366, noi, noisette, [RH, Score=609, Expect=0.0]} {Celegans: WBGene00011758, T13H5.4, [RH, Score=524, Expect=0.0]} {Smed: dd_Smed_v6_2653_0_1, dd_Smed_v6_2653_0_1, [RH, Score=551, Expect=0.0]} {RNA1509_27195} {RNA1310_12410} {RNA815_13038} Mlig455_022046 {REF} {Length: 1884} {TRANSSPLICED} {Pfam: SF3a60/Prp9 C-terminal [PF11931.10, score=183.7]; Replication stress response SDE2 C-terminal [PF13297.8, score=96.5]; Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9 [PF16837.7, score=60.7]; Splicing factor SF3a60 binding domain [PF12108.10, score=28.6]} {Human: ENSG00000183431, SF3A3, splicing factor 3a subunit 3, [RH, Score=629, Expect=0.0]} {Mouse: ENSMUSG00000028902, Sf3a3, splicing factor 3a, subunit 3, [RH, Score=628, Expect=0.0]} {Dmel: FBgn0014366, noi, noisette, [RH, Score=609, Expect=0.0]} {Celegans: WBGene00011758, T13H5.4, [RH, Score=524, Expect=0.0]} {Smed: dd_Smed_v6_2653_0_1, dd_Smed_v6_2653_0_1, [RH, Score=551, Expect=0.0]} {RNA1509_26009, RNA1509_27195, RNA1509_35084, RNA1509_58691, RNA1509_9315} {RNA1310_12410, RNA1509_26009, RNA1509_27195, RNA1509_35084, RNA1509_58691, RNA1509_9315} {RNA1509_26009, RNA1509_27195, RNA1509_35084, RNA1509_58691, RNA1509_9315, RNA815_13038} |
| 8. | MligTC455_39646 | 934 | 19.46 | Mlig455_021914 | Neo: Neoblast, stringent |
SF3A3 | 1.681 | - | - | - | - | 0.952 | 0.729 | Mlig455_021914 {REF} {Length: 1804} {TRANSSPLICED} {Pfam: SF3a60/Prp9 C-terminal [PF11931.10, score=144.3]} {Human: ENSG00000183431, SF3A3, splicing factor 3a subunit 3, [Score=243, Expect=9e-77]} {Mouse: ENSMUSG00000028902, Sf3a3, splicing factor 3a, subunit 3, [Score=243, Expect=3e-77]} {Dmel: FBgn0014366, noi, noisette, [Score=253, Expect=9e-81]} {Celegans: WBGene00011758, T13H5.4, [Score=206, Expect=3e-63]} {Smed: dd_Smed_v6_2653_0_1, dd_Smed_v6_2653_0_1, [Score=207, Expect=3e-63]} {RNA1509_27195} {RNA1310_12410} {RNA815_13038} |
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