Data search
Results for MligTC455_54264
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_54264 | 616 | 12.84 | Mlig455_058940 | Neo: - Age: - Region-enriched R5: 1.226/0.03424 |
WRAP73 | Mlig455_058940 {REF} {Length: 2138} {Pfam: WD domain, G-beta repeat [PF00400.34, score=41.5]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=35.7]; Eukaryotic translation initiation factor eIF2A [PF08662.13, score=21.0]} {Human: ENSG00000116213, WRAP73, WD repeat containing, antisense to TP73, [RH, Score=422, Expect=1e-144]} {Mouse: ENSMUSG00000029029, Wrap73, WD repeat containing, antisense to Trp73, [RH, Score=410, Expect=5e-140]} {Smed: dd_Smed_v6_14024_0_1, dd_Smed_v6_14024_0_1, [RH, Score=295, Expect=6e-96]} {RNA1509_16472, RNA1509_18253} {RNA1310_14155.1, RNA1509_18253} {RNA1509_18253, RNA815_5466.1} |
Cumulative graph for MligTC455_54264
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.217 | 4.042 | 0.30130 | 0.95114 | |
| RegionR2 | 0.639 | 4.042 | 0.30051 | 0.68973 | |
| RegionR3 | 0.333 | 4.042 | 0.50809 | 0.99753 | |
| RegionR4 | 0.523 | 4.042 | 0.35202 | 0.67387 | |
| RegionR5 | 1.226 | 4.042 | 0.00493 | 0.03424 | |
| RegionR6 | 0.143 | 4.042 | 0.77462 | 1.00000 | |
| RegionR7 | -0.739 | 4.042 | 0.24543 | 0.87222 | |
| RegionR8 | -0.909 | 4.042 | 0.19385 | 0.78828 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.477 | 4.042 | 0.14222 | 0.88207 | |
| RegenerationR2 | 0.427 | 4.042 | 0.45615 | 0.85062 | |
| RegenerationR3 | 0.024 | 4.042 | 0.97218 | 1.00000 | |
| RegenerationR4 | -0.655 | 4.042 | 0.32985 | 0.76421 | |
| RegenerationR5 | -0.945 | 4.042 | 0.11205 | 0.50504 | |
| RegenerationR6 | 0.358 | 4.042 | 0.57426 | 0.85422 | |
| RegenerationBL | -0.438 | 4.042 | 0.57039 | 0.92386 | |
| RegenerationTP | 0.405 | 4.042 | 0.60342 | 0.96280 |
Genes with expression patterns similar to MligTC455_54264
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_54264 | 616 | 12.84 | Mlig455_058940 | Neo: - Age: - Region-enriched R5: 1.226/0.03424 |
WRAP73 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_058940 {REF} {Length: 2138} {Pfam: WD domain, G-beta repeat [PF00400.34, score=41.5]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=35.7]; Eukaryotic translation initiation factor eIF2A [PF08662.13, score=21.0]} {Human: ENSG00000116213, WRAP73, WD repeat containing, antisense to TP73, [RH, Score=422, Expect=1e-144]} {Mouse: ENSMUSG00000029029, Wrap73, WD repeat containing, antisense to Trp73, [RH, Score=410, Expect=5e-140]} {Smed: dd_Smed_v6_14024_0_1, dd_Smed_v6_14024_0_1, [RH, Score=295, Expect=6e-96]} {RNA1509_16472, RNA1509_18253} {RNA1310_14155.1, RNA1509_18253} {RNA1509_18253, RNA815_5466.1} |
| 2. | MligTC455_54263 | 873 | 18.19 | Mlig455_058936 | Neo: - Age: - Region-enriched R5: 1.090/0.00783 |
WRAP73 | 5.466 | 0.996 | 0.998 | 0.852 | 0.753 | 0.940 | 0.927 | Mlig455_058936 {REF} {Length: 2629} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=40.5]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=34.9]; Eukaryotic translation initiation factor eIF2A [PF08662.13, score=20.8]} {Human: ENSG00000116213, WRAP73, WD repeat containing, antisense to TP73, [RH, Score=421, Expect=2e-144]} {Mouse: ENSMUSG00000029029, Wrap73, WD repeat containing, antisense to Trp73, [RH, Score=410, Expect=3e-140]} {Smed: dd_Smed_v6_14024_0_1, dd_Smed_v6_14024_0_1, [RH, Score=297, Expect=1e-96]} {RNA1509_16472} {RNA1310_14155.1} {RNA815_5466.1} |
Berezikov Lab - 2020-2021 © ERIBA