TomoSeq data search

Data search

Results for MligTC455_54265

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_54265	38	0.78	Mlig455_011470	Neo: - Age: - Region-enriched R4: 4.896/0.02622 Region-enriched R5: 3.274/0.02795	SUPT5H	Mlig455_011470 {REF} {Length: 4774} {TRANSSPLICED} {Pfam: KOW motif [PF00467.31, score=88.3]; Early transcription elongation factor of RNA pol II, NGN section [PF03439.15, score=86.4]; Spt5 transcription elongation factor, acidic N-terminal [PF11942.10, score=36.8]; Spt5 C-terminal nonapeptide repeat binding Spt4 [PF12815.9, score=33.2]} {Human: ENSG00000196235, SUPT5H, SPT5 homolog, DSIF elongation factor subunit, [RH, Score=806, Expect=0.0]} {Mouse: ENSMUSG00000003435, Supt5, suppressor of Ty 5, [RH, Score=807, Expect=0.0]} {Dmel: FBgn0040273, Spt5, [RH, Score=758, Expect=0.0]} {Celegans: WBGene00005015, spt-5, Transcription elongation factor SPT5, [RH, Score=573, Expect=0.0]} {Smed: dd_Smed_v6_3492_0_1, dd_Smed_v6_3492_0_1, [RH, Score=478, Expect=4e-152]} {RNA1509_2802, RNA1509_51179} {RNA1310_3974.1, RNA1509_51179} {RNA1509_51179, RNA815_4949}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_54265

0.78

Mlig455_011470

Neo: -

Age: -

Region-enriched R4: 4.896/0.02622
Region-enriched R5: 3.274/0.02795

SUPT5H

Mlig455_011470 {REF} {Length: 4774} {TRANSSPLICED} {Pfam: KOW motif [PF00467.31, score=88.3]; Early transcription elongation factor of RNA pol II, NGN section [PF03439.15, score=86.4]; Spt5 transcription elongation factor, acidic N-terminal [PF11942.10, score=36.8]; Spt5 C-terminal nonapeptide repeat binding Spt4 [PF12815.9, score=33.2]} {Human: ENSG00000196235, SUPT5H, SPT5 homolog, DSIF elongation factor subunit, [RH, Score=806, Expect=0.0]} {Mouse: ENSMUSG00000003435, Supt5, suppressor of Ty 5, [RH, Score=807, Expect=0.0]} {Dmel: FBgn0040273, Spt5, [RH, Score=758, Expect=0.0]} {Celegans: WBGene00005015, spt-5, Transcription elongation factor SPT5, [RH, Score=573, Expect=0.0]} {Smed: dd_Smed_v6_3492_0_1, dd_Smed_v6_3492_0_1, [RH, Score=478, Expect=4e-152]} {RNA1509_2802, RNA1509_51179} {RNA1310_3974.1, RNA1509_51179} {RNA1509_51179, RNA815_4949}

Cumulative graph for MligTC455_54265

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-3.526	1.154	1.00000	1.00000
RegionR2	-0.442	1.154	0.82175	1.00000
RegionR3	1.955	1.154	0.11724	0.59366
RegionR4	4.896	1.154	0.00329	0.02622
RegionR5	3.274	1.154	0.00375	0.02795
RegionR6	1.367	1.154	0.34160	0.92864
RegionR7	-3.569	1.154	1.00000	1.00000
RegionR8	-3.956	1.154	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.572	1.154	0.99981	1.00000
RegenerationR2	-1.239	1.154	0.22253	0.67006
RegenerationR3	-0.74	1.154	0.38451	0.79273
RegenerationR4	-1.072	1.154	0.30592	0.74734
RegenerationR5	-1.032	1.154	0.18650	0.61729
RegenerationR6	-0.731	1.154	0.55042	0.83898
RegenerationBL	2.809	1.154	0.19429	0.53015
RegenerationTP	1.709	1.154	0.51085	0.90769

Genes with expression patterns similar to MligTC455_54265

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_54265	38	0.78	Mlig455_011470	Neo: - Age: - Region-enriched R4: 4.896/0.02622 Region-enriched R5: 3.274/0.02795	SUPT5H	4	1.000	-	1.000	1.000	-	1.000	Mlig455_011470 {REF} {Length: 4774} {TRANSSPLICED} {Pfam: KOW motif [PF00467.31, score=88.3]; Early transcription elongation factor of RNA pol II, NGN section [PF03439.15, score=86.4]; Spt5 transcription elongation factor, acidic N-terminal [PF11942.10, score=36.8]; Spt5 C-terminal nonapeptide repeat binding Spt4 [PF12815.9, score=33.2]} {Human: ENSG00000196235, SUPT5H, SPT5 homolog, DSIF elongation factor subunit, [RH, Score=806, Expect=0.0]} {Mouse: ENSMUSG00000003435, Supt5, suppressor of Ty 5, [RH, Score=807, Expect=0.0]} {Dmel: FBgn0040273, Spt5, [RH, Score=758, Expect=0.0]} {Celegans: WBGene00005015, spt-5, Transcription elongation factor SPT5, [RH, Score=573, Expect=0.0]} {Smed: dd_Smed_v6_3492_0_1, dd_Smed_v6_3492_0_1, [RH, Score=478, Expect=4e-152]} {RNA1509_2802, RNA1509_51179} {RNA1310_3974.1, RNA1509_51179} {RNA1509_51179, RNA815_4949}
2.	MligTC455_39856	27	0.57	Mlig455_044370	Neo: - Age: -		0.983	-	-	0.983	-	-	-	Mlig455_044370 {REF} {Length: 2061} {TRANSSPLICED} {Pfam: Sleepless protein [PF17064.7, score=37.9]} {Dmel: FBgn0260499, qvr, quiver, [RH, Score=83.6, Expect=1e-20]} {Smed: dd_Smed_v6_16907_0_2, dd_Smed_v6_16907_0_2, [RH, Score=79.7, Expect=2e-19]} {RNA1509_18512, RNA1509_46165} {RNA1310_30063.1, RNA1509_18512, RNA1509_46165} {RNA1509_18512, RNA1509_46165, RNA815_15178.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts