Data search
Results for MligTC455_54266
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_54266 | 39 | 0.80 | Mlig455_011556 | Neo: - Age: - |
SUPT5H | Mlig455_011556 {REF} {Length: 4498} {TRANSSPLICED} {Pfam: KOW motif [PF00467.31, score=88.3]; Early transcription elongation factor of RNA pol II, NGN section [PF03439.15, score=86.4]; Spt5 transcription elongation factor, acidic N-terminal [PF11942.10, score=36.8]; Spt5 C-terminal nonapeptide repeat binding Spt4 [PF12815.9, score=33.3]} {Human: ENSG00000196235, SUPT5H, SPT5 homolog, DSIF elongation factor subunit, [RH, Score=807, Expect=0.0]} {Mouse: ENSMUSG00000003435, Supt5, suppressor of Ty 5, [RH, Score=810, Expect=0.0]} {Dmel: FBgn0040273, Spt5, [RH, Score=758, Expect=0.0]} {Celegans: WBGene00005015, spt-5, Transcription elongation factor SPT5, [RH, Score=572, Expect=0.0]} {Smed: dd_Smed_v6_3492_0_1, dd_Smed_v6_3492_0_1, [RH, Score=478, Expect=4e-152]} {RNA1509_24857, RNA1509_2802} {RNA1310_3974.1, RNA1509_24857, RNA1509_2802} {RNA1509_24857, RNA1509_2802, RNA815_4949} |
Cumulative graph for MligTC455_54266
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.648 | 1.228 | 1.00000 | 1.00000 | |
| RegionR2 | -0.263 | 1.228 | 0.83536 | 1.00000 | |
| RegionR3 | 2.238 | 1.228 | 0.08977 | 0.52905 | |
| RegionR4 | 3.088 | 1.228 | 0.09887 | 0.30515 | |
| RegionR5 | 0.805 | 1.228 | 0.45374 | 0.81559 | |
| RegionR6 | 0.807 | 1.228 | 0.53813 | 1.00000 | |
| RegionR7 | -3.583 | 1.228 | 0.99978 | 1.00000 | |
| RegionR8 | -3.74 | 1.228 | 0.99988 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.75 | 1.228 | 0.99991 | 1.00000 | |
| RegenerationR2 | 2.882 | 1.228 | 0.02272 | 0.24799 | |
| RegenerationR3 | 1.587 | 1.228 | 0.25475 | 0.68922 | |
| RegenerationR4 | 1.498 | 1.228 | 0.40579 | 0.81733 | |
| RegenerationR5 | 3.133 | 1.228 | 0.01161 | 0.19013 | |
| RegenerationR6 | 2.239 | 1.228 | 0.11826 | 0.42279 | |
| RegenerationBL | 5.664 | 1.228 | 0.01460 | 0.12634 | |
| RegenerationTP | 4.265 | 1.228 | 0.14307 | 0.56396 |
Genes with expression patterns similar to MligTC455_54266
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_54266 | 39 | 0.8 | Mlig455_011556 | Neo: - Age: - |
SUPT5H | 3 | 1.000 | - | - | 1.000 | - | 1.000 | Mlig455_011556 {REF} {Length: 4498} {TRANSSPLICED} {Pfam: KOW motif [PF00467.31, score=88.3]; Early transcription elongation factor of RNA pol II, NGN section [PF03439.15, score=86.4]; Spt5 transcription elongation factor, acidic N-terminal [PF11942.10, score=36.8]; Spt5 C-terminal nonapeptide repeat binding Spt4 [PF12815.9, score=33.3]} {Human: ENSG00000196235, SUPT5H, SPT5 homolog, DSIF elongation factor subunit, [RH, Score=807, Expect=0.0]} {Mouse: ENSMUSG00000003435, Supt5, suppressor of Ty 5, [RH, Score=810, Expect=0.0]} {Dmel: FBgn0040273, Spt5, [RH, Score=758, Expect=0.0]} {Celegans: WBGene00005015, spt-5, Transcription elongation factor SPT5, [RH, Score=572, Expect=0.0]} {Smed: dd_Smed_v6_3492_0_1, dd_Smed_v6_3492_0_1, [RH, Score=478, Expect=4e-152]} {RNA1509_24857, RNA1509_2802} {RNA1310_3974.1, RNA1509_24857, RNA1509_2802} {RNA1509_24857, RNA1509_2802, RNA815_4949} |
| 2. | MligTC455_28232 | 23 | 0.47 | Mlig455_048762, Mlig455_059262 | Neo: - Age: - |
0.977 | - | - | - | 0.977 | - | - | Mlig455_048762 {REF} {Length: 1714} {RNA1509_48610} {RNA1310_16690.2} {RNA815_20964.1} Mlig455_059262 {REF} {Length: 4559} {TRANSSPLICED} {RNA1509_48610} {RNA1310_16690.1} {RNA815_20964.1} |
|
| 3. | MligTC455_17565 | 85 | 1.77 | Mlig455_054318 | Neo: - Age: - Region-enriched R2: 6.111/0.00708 |
0.957 | - | - | - | - | - | 0.957 | Mlig455_054318 {REF} {Length: 550} {RNA1310_73705} {RNA815_38857} |
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