Data search
Results for MligTC455_54291
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_54291 | 700 | 14.58 | Mlig455_050973, Mlig455_051029 | Neo: - Age: - Region-enriched R5: 1.019/0.00478 |
Mlig455_050973 {REF} {Length: 1128} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF13424.8, score=24.9]; Tetratricopeptide repeat [PF14559.8, score=19.8]} {RNA1509_57657} {RNA1310_30653} {RNA815_20054} Mlig455_051029 {REF} {Length: 1000} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF13424.8, score=28.0]; Tetratricopeptide repeat [PF14559.8, score=19.4]; Tetratricopeptide repeat [PF07719.19, score=18.8]} {RNA1509_57657} {RNA1310_36810, RNA1509_57657} {RNA1509_57657, RNA815_20054} |
Cumulative graph for MligTC455_54291
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.15 | 4.16 | 0.89257 | 1.00000 | |
| RegionR2 | -0.509 | 4.16 | 0.25206 | 0.63135 | |
| RegionR3 | -0.215 | 4.16 | 0.54786 | 1.00000 | |
| RegionR4 | 0.421 | 4.16 | 0.29494 | 0.60644 | |
| RegionR5 | 1.019 | 4.16 | 0.00038 | 0.00478 | |
| RegionR6 | 0.784 | 4.16 | 0.01587 | 0.22204 | |
| RegionR7 | 0.077 | 4.16 | 0.86885 | 1.00000 | |
| RegionR8 | -1.426 | 4.16 | 0.06120 | 0.48188 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.103 | 4.16 | 0.94495 | 1.00000 | |
| RegenerationR2 | -0.06 | 4.16 | 0.86256 | 1.00000 | |
| RegenerationR3 | 0.266 | 4.16 | 0.47325 | 0.84598 | |
| RegenerationR4 | -0.423 | 4.16 | 0.25255 | 0.70098 | |
| RegenerationR5 | -0.382 | 4.16 | 0.21433 | 0.64929 | |
| RegenerationR6 | -0.812 | 4.16 | 0.02656 | 0.20409 | |
| RegenerationBL | 0.441 | 4.16 | 0.37869 | 0.74740 | |
| RegenerationTP | 0.892 | 4.16 | 0.11884 | 0.52696 |
Genes with expression patterns similar to MligTC455_54291
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_54291 | 700 | 14.58 | Mlig455_050973, Mlig455_051029 | Neo: - Age: - Region-enriched R5: 1.019/0.00478 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_050973 {REF} {Length: 1128} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF13424.8, score=24.9]; Tetratricopeptide repeat [PF14559.8, score=19.8]} {RNA1509_57657} {RNA1310_30653} {RNA815_20054} Mlig455_051029 {REF} {Length: 1000} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF13424.8, score=28.0]; Tetratricopeptide repeat [PF14559.8, score=19.4]; Tetratricopeptide repeat [PF07719.19, score=18.8]} {RNA1509_57657} {RNA1310_36810, RNA1509_57657} {RNA1509_57657, RNA815_20054} |
|
| 2. | MligTC455_27725 | 1230 | 25.63 | Mlig455_034017 | Neo: - Age: - |
SCYL3 | 1.734 | - | - | 0.782 | - | - | 0.952 | Mlig455_034017 {REF} {Length: 2856} {Pfam: Protein kinase domain [PF00069.27, score=28.5]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=27.4]} {Human: ENSG00000000457, SCYL3, SCY1 like pseudokinase 3, [RH, Score=174, Expect=5e-46]} {Mouse: ENSMUSG00000026584, Scyl3, SCY1-like 3 (S. cerevisiae), [RH, Score=179, Expect=4e-47]} {Dmel: FBgn0260990, yata, [Score=97.4, Expect=1e-20]} {Celegans: WBGene00012337, W07G4.3, [Score=91.7, Expect=6e-19]} {Smed: dd_Smed_v6_3470_0_1, dd_Smed_v6_3470_0_1, [Score=93.6, Expect=1e-19]} {RNA1509_28121} {RNA1310_5680.1} {RNA815_5172} |
| 3. | MligTC455_13253 | 727 | 15.15 | Mlig455_000519 | Neo: - Age: - Region-enriched R5: 1.363/0.00499 |
PRMT5 | 1.66 | 0.700 | - | - | - | - | 0.960 | Mlig455_000519 {REF} {Length: 2673} {TRANSSPLICED} {Pfam: PRMT5 arginine-N-methyltransferase [PF05185.18, score=193.6]; PRMT5 TIM barrel domain [PF17285.4, score=193.0]; PRMT5 oligomerisation domain [PF17286.4, score=155.4]} {Human: ENSG00000100462, PRMT5, protein arginine methyltransferase 5, [RH, Score=526, Expect=3e-179]} {Mouse: ENSMUSG00000023110, Prmt5, protein arginine N-methyltransferase 5, [RH, Score=519, Expect=2e-176]} {Dmel: FBgn0015925, csul, capsuleen, [RH, Score=358, Expect=8e-115]} {Celegans: WBGene00016408, prmt-5, Protein arginine N-methyltransferase 5, [RH, Score=287, Expect=2e-86]} {Smed: dd_Smed_v6_8688_0_1, dd_Smed_v6_8688_0_1, [RH, Score=466, Expect=5e-156]} {RNA1509_6180} {RNA1310_7540.1} {RNA815_6900} |
| 4. | MligTC455_51466 | 1978 | 41.22 | Mlig455_036524 | Neo: - Age: - |
TRAM1 | 0.974 | - | - | - | - | - | 0.974 | Mlig455_036524 {REF} {Length: 2909} {Pfam: TLC domain [PF03798.18, score=73.6]; TRAM1-like protein [PF08390.13, score=68.0]} {Human: ENSG00000067167, TRAM1, translocation associated membrane protein 1, [RH, Score=306, Expect=1e-101]} {Mouse: ENSMUSG00000025935, Tram1, translocating chain-associating membrane protein 1, [RH, Score=311, Expect=1e-103]} {Dmel: FBgn0040340, TRAM, [RH, Score=229, Expect=5e-72]} {Celegans: WBGene00007696, tram-1, Translocating chain-associated membrane protein, [RH, Score=219, Expect=3e-68]} {Smed: dd_Smed_v6_1740_0_1, dd_Smed_v6_1740_0_1, [RH, Score=402, Expect=8e-140]} {RNA1509_2218} {RNA1310_8399, RNA1509_2218} {RNA1509_2218, RNA815_5690} |
| 5. | MligTC455_13252 | 756 | 15.76 | Mlig455_000483 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.414/0.00198 |
PRMT5 | 0.968 | - | - | - | - | - | 0.968 | Mlig455_000483 {REF} {Length: 2673} {TRANSSPLICED} {Pfam: PRMT5 TIM barrel domain [PF17285.4, score=194.3]; PRMT5 arginine-N-methyltransferase [PF05185.18, score=193.0]; PRMT5 oligomerisation domain [PF17286.4, score=155.4]} {Human: ENSG00000100462, PRMT5, protein arginine methyltransferase 5, [RH, Score=528, Expect=3e-180]} {Mouse: ENSMUSG00000023110, Prmt5, protein arginine N-methyltransferase 5, [RH, Score=521, Expect=2e-177]} {Dmel: FBgn0015925, csul, capsuleen, [RH, Score=356, Expect=8e-114]} {Celegans: WBGene00016408, prmt-5, Protein arginine N-methyltransferase 5, [RH, Score=286, Expect=4e-86]} {Smed: dd_Smed_v6_8688_0_1, dd_Smed_v6_8688_0_1, [RH, Score=466, Expect=6e-156]} {RNA1509_6180} {RNA1310_7540.1} {RNA815_6900} |
| 6. | MligTC455_30674 | 1192 | 24.83 | Mlig455_051439 | Neo: - Age: logFC(26M/2M)=-0.307 Region-enriched R4: 1.253/0.02916 |
0.967 | - | - | - | 0.967 | - | - | Mlig455_051439 {REF} {Length: 4565} {TRANSSPLICED} {Pfam: Family of unknown function (DUF5305) [PF17231.4, score=20.8]; TMEM154 protein family [PF15102.8, score=19.7]; Domain of unknown function (DUF3377) [PF11857.10, score=19.4]} {RNA1509_12475, RNA1509_25956, RNA1509_57309} {RNA1310_6745.1, RNA1509_25956, RNA1509_57309} {RNA1509_25956, RNA1509_57309, RNA815_2563.1} | |
| 7. | MligTC455_44178 | 689 | 14.34 | Mlig455_011679 | Neo: - Age: - Region-enriched R5: 1.479/0.00020 |
0.966 | - | - | - | - | - | 0.966 | Mlig455_011679 {REF} {Length: 1157} {NoTransDecoderORF} {RNA1509_26459} {RNA1310_18996.2} {RNA815_12555.1} | |
| 8. | MligTC455_30673 | 1239 | 25.81 | Mlig455_023260, Mlig455_030004, Mlig455_051427 | Neo: - Age: - |
0.965 | - | - | - | 0.965 | - | - | Mlig455_023260 {REF} {Length: 2216} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=98.4]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=79.6]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=57.9]; gag-polyprotein putative aspartyl protease [PF13975.8, score=31.4]; Aspartyl protease [PF13650.8, score=28.8]} {Smed: dd_Smed_v6_1574_6_38, dd_Smed_v6_1574_6_38, [Score=368, Expect=2e-118]} {RNA1509_30575} {RNA1310_870} {RNA815_993.1} Mlig455_030004 {REF} {Length: 3461} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=124.6]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=119.1]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=69.6]; Integrase zinc binding domain [PF17921.3, score=67.2]; Integrase core domain [PF00665.28, score=52.2]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=94.4, Expect=6e-19]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=400, Expect=1e-121]} {RNA1509_29748} {RNA1310_870} {RNA815_993.1} Mlig455_051427 {REF} {Length: 10048} {TRANSSPLICED} {Pfam: TMEM154 protein family [PF15102.8, score=18.9]} {RNA1509_29748} {RNA1310_870} {RNA815_993.1} |
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| 9. | MligTC455_39535 | 136 | 2.82 | Mlig455_001450 | Neo: - Age: logFC(26M/2M)=-0.580 |
HOXD3 | 0.956 | - | - | - | - | 0.956 | - | Mlig455_001450 {REF} {Length: 2041} {Pfam: Homeodomain [PF00046.31, score=77.8]} {Human: ENSG00000128652, HOXD3, homeobox D3, [RH, Score=130, Expect=3e-34]; ENSG00000120093, HOXB3, homeobox B3, [RH, Score=128, Expect=1e-34]; ENSG00000105997, HOXA3, homeobox A3, [RH, Score=127, Expect=5e-33]} {Mouse: ENSMUSG00000079277, Hoxd3, homeobox D3, [RH, Score=130, Expect=2e-34]; ENSMUSG00000079560, Hoxa3, homeobox A3, [RH, Score=128, Expect=1e-33]; ENSMUSG00000048763, Hoxb3, homeobox B3, [RH, Score=127, Expect=2e-33]} {Dmel: FBgn0000439, Dfd, Deformed, [RH, Score=108, Expect=4e-26]} {Celegans: WBGene00003024, lin-39, Homeobox protein lin-39, [Score=91.7, Expect=1e-21]} {Smed: dd_Smed_v6_22992_0_1, dd_Smed_v6_22992_0_1, [RH, Score=116, Expect=2e-30]} {RNA1509_47271} {RNA1310_25878, RNA1509_47271} {RNA1509_47271, RNA815_41199} |