TomoSeq data search

Data search

Results for MligTC455_54309

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_54309

787

16.41

Mlig455_067940

Neo: -

Age: -

POLR2A

Mlig455_067940 {REF} {Length: 3788} {Human: ENSG00000284832, POLR2A, RNA polymerase II subunit A, [Score=50.4, Expect=9e-06]} {Mouse: ENSMUSG00000036864, Proser3, proline and serine rich 3, [Score=55.1, Expect=2e-07]} {Dmel: FBgn0259680, Pkcdelta, Protein kinase C delta, [Score=48.9, Expect=1e-05]} {RNA1509_29276} {RNA1310_24012, RNA1509_29276} {RNA1509_29276, RNA815_12443.1}

Cumulative graph for MligTC455_54309

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.891	4.327	0.12973	0.72728
RegionR2	0.09	4.327	0.83183	1.00000
RegionR3	0.019	4.327	0.95271	1.00000
RegionR4	0.561	4.327	0.16084	0.41834
RegionR5	0.743	4.327	0.01551	0.08016
RegionR6	0.005	4.327	0.98527	1.00000
RegionR7	0.25	4.327	0.57316	1.00000
RegionR8	0.223	4.327	0.67636	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-5.539	4.327	0.29584	0.99329
RegenerationR2	0	4.327	0.99861	1.00000
RegenerationR3	0.118	4.327	0.75092	0.96501
RegenerationR4	-0.322	4.327	0.38725	0.80569
RegenerationR5	-0.128	4.327	0.69780	0.95078
RegenerationR6	0.528	4.327	0.16815	0.49876
RegenerationBL	0.174	4.327	0.69477	1.00000
RegenerationTP	0.507	4.327	0.25964	0.70721

Genes with expression patterns similar to MligTC455_54309

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_54309	787	16.41	Mlig455_067940	Neo: - Age: -	POLR2A	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_067940 {REF} {Length: 3788} {Human: ENSG00000284832, POLR2A, RNA polymerase II subunit A, [Score=50.4, Expect=9e-06]} {Mouse: ENSMUSG00000036864, Proser3, proline and serine rich 3, [Score=55.1, Expect=2e-07]} {Dmel: FBgn0259680, Pkcdelta, Protein kinase C delta, [Score=48.9, Expect=1e-05]} {RNA1509_29276} {RNA1310_24012, RNA1509_29276} {RNA1509_29276, RNA815_12443.1}
2.	MligTC455_31757	447	9.31	Mlig455_038047	Neo: - Age: -	RELA	1.78	-	-	-	-	0.812	0.968	Mlig455_038047 {REF} {Length: 5579} {TRANSSPLICED} {Pfam: Rel homology DNA-binding domain [PF00554.24, score=60.0]} {Human: ENSG00000173039, RELA, RELA proto-oncogene, NF-kB subunit, [RH, Score=58.9, Expect=2e-09]} {Mouse: ENSMUSG00000024927, Rela, v-rel reticuloendotheliosis viral oncogene homolog A (avian), [Score=57.0, Expect=1e-08]; ENSMUSG00000020275, Rel, reticuloendotheliosis oncogene, [Score=55.5, Expect=4e-08]} {RNA1509_14750} {RNA1310_24270, RNA1509_14750} {RNA1509_14750, RNA815_9421.1}
3.	MligTC455_47006	1071	22.32	Mlig455_020159	Neo: - Age: -	AC270289.2	0.954	-	-	-	-	-	0.954	Mlig455_020159 {REF} {Length: 1340} {TRANSSPLICED} {Pfam: Methyltransferase domain [PF08241.14, score=59.1]; Methyltransferase domain [PF13649.8, score=44.8]; Methyltransferase domain [PF08242.14, score=33.6]; Methyltransferase domain [PF13489.8, score=21.9]} {Human: ENSG00000284872, AC270289.2, tRNA methyltransferase 9B (putative), [Score=100, Expect=8e-23]; ENSG00000250305, TRMT9B, tRNA methyltransferase 9B (putative), [Score=100, Expect=7e-23]} {Mouse: ENSMUSG00000025899, Alkbh8, alkB homolog 8, tRNA methyltransferase, [Score=105, Expect=1e-24]; ENSMUSG00000039620, Trmt9b, tRNA methyltransferase 9B, [Score=100, Expect=4e-23]} {Dmel: FBgn0259146, fid, fire dancer, [Score=85.9, Expect=6e-18]} {Celegans: WBGene00016448, C35D10.12, [RH, Score=99.8, Expect=2e-23]} {Smed: dd_Smed_v6_13891_0_1, dd_Smed_v6_13891_0_1, [Score=68.2, Expect=1e-12]} {RNA1509_15330} {RNA1310_25214, RNA1509_15330} {RNA1509_15330, RNA815_34025}
4.	MligTC455_17295	545	11.35	Mlig455_025108	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.622		0.95	-	-	-	-	-	0.950	Mlig455_025108 {REF} {Length: 467} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_19286, RNA1509_40995} {RNA1310_11603.1, RNA1509_19286, RNA1509_40995} {RNA1509_19286, RNA1509_40995, RNA815_39462}

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