TomoSeq data search

Data search

Results for MligTC455_55714

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_55714	12	0.25	Mlig455_008700	Neo: - Age: -		Mlig455_008700 {REF} {Length: 482} {NoTransDecoderORF} {RNA1509_29941} {RNA1310_39873.1} {RNA815_8571.2}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_55714

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_55714

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_55714	12	0.25	Mlig455_008700	Neo: - Age: -		1	-	-	-	-	-	1.000	Mlig455_008700 {REF} {Length: 482} {NoTransDecoderORF} {RNA1509_29941} {RNA1310_39873.1} {RNA815_8571.2}
2.	MligTC455_16184	57	1.18	Mlig455_035689	Neo: - Age: - Region-enriched R8: 6.062/0.03354	ADAMTS18	0.972	-	-	-	-	-	0.972	Mlig455_035689 {REF} {Length: 3186} {Pfam: Reprolysin (M12B) family zinc metalloprotease [PF01421.21, score=23.8]; Metallo-peptidase family M12B Reprolysin-like [PF13582.8, score=22.0]; Metallo-peptidase family M12 [PF13688.8, score=18.9]} {Human: ENSG00000140873, ADAMTS18, ADAM metallopeptidase with thrombospondin type 1 motif 18, [Score=53.9, Expect=7e-07]} {Mouse: ENSMUSG00000053399, Adamts18, a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18, [Score=52.0, Expect=2e-06]; ENSMUSG00000058145, Adamts17, a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 17, [Score=49.7, Expect=8e-06]} {RNA1509_59538} {RNA1310_25472.1, RNA1509_59538} {RNA1509_59538, RNA815_44251}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_55714

0.25

Mlig455_008700

Neo: -

Age: -

1.000

Mlig455_008700 {REF} {Length: 482} {NoTransDecoderORF} {RNA1509_29941} {RNA1310_39873.1} {RNA815_8571.2}

MligTC455_16184

1.18

Mlig455_035689

Neo: -

Age: -

Region-enriched R8: 6.062/0.03354

ADAMTS18

0.972

Mlig455_035689 {REF} {Length: 3186} {Pfam: Reprolysin (M12B) family zinc metalloprotease [PF01421.21, score=23.8]; Metallo-peptidase family M12B Reprolysin-like [PF13582.8, score=22.0]; Metallo-peptidase family M12 [PF13688.8, score=18.9]} {Human: ENSG00000140873, ADAMTS18, ADAM metallopeptidase with thrombospondin type 1 motif 18, [Score=53.9, Expect=7e-07]} {Mouse: ENSMUSG00000053399, Adamts18, a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18, [Score=52.0, Expect=2e-06]; ENSMUSG00000058145, Adamts17, a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 17, [Score=49.7, Expect=8e-06]} {RNA1509_59538} {RNA1310_25472.1, RNA1509_59538} {RNA1509_59538, RNA815_44251}