M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_00096

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_00096 11 0.24 Mlig455_014594

Neo: -

Age: -

 Mlig455_014594 {REF} {Length: 474} {NoTransDecoderORF} {RNA1310_4616.1} {RNA815_5995}

Cumulative graph for MligTC455_00096

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -4.868 0.614 0.99989 1.00000
RegionR2 4.065 0.614 0.99989 1.00000
RegionR3 1.374 0.614 0.99994 1.00000
RegionR4 -3.22 0.614 0.99980 1.00000
RegionR5 0.012 0.614 1.00000 1.00000
RegionR6 0.955 0.614 0.99998 1.00000
RegionR7 1.348 0.614 0.99997 1.00000
RegionR8 0.334 0.614 0.99994 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 4.032 0.614 0.99995 1.00000
RegenerationR2 2.53 0.614 1.00000 1.00000
RegenerationR3 0.194 0.614 0.99994 1.00000
RegenerationR4 2.982 0.614 1.00000 1.00000
RegenerationR5 0.144 0.614 0.99994 1.00000
RegenerationR6 0.058 0.614 0.99996 1.00000
RegenerationBL -0.451 0.614 1.00000 1.00000
RegenerationTP 3.748 0.614 1.00000 1.00000


Genes with expression patterns similar to MligTC455_00096

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_00096 11 0.24 Mlig455_014594

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_014594 {REF} {Length: 474} {NoTransDecoderORF} {RNA1310_4616.1} {RNA815_5995}
2. MligTC455_04965 9 0.19 Mlig455_011360

Neo: -

Age: -

 0.996 - - - - 0.996 - Mlig455_011360 {REF} {Length: 1990} {NoTransDecoderORF} {RNA1310_46919} {RNA815_64863}
3. MligTC455_00864 11 0.22 Mlig455_028072

Neo: -

Age: -

 0.995 - - - - 0.995 - Mlig455_028072 {REF} {Length: 1130}
4. MligTC455_44789 48 0.99 Mlig455_018729, Mlig455_018919

Neo: -

Age: -

 CALML3 0.994 - - - - 0.994 -

Mlig455_018729 {REF} {Length: 803} {Pfam: EF hand [PF00036.34, score=83.6]; EF-hand domain pair [PF13499.8, score=76.3]; EF-hand domain pair [PF13833.8, score=67.5]; EF-hand domain [PF13405.8, score=67.1]; EF hand [PF13202.8, score=48.4]; EF-hand domain [PF14658.8, score=27.2]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=20.1]; Family of unknown function (DUF5580) [PF17743.3, score=18.7]} {Human: ENSG00000178363, CALML3, calmodulin like 3, [Score=90.5, Expect=2e-23]} {Mouse: ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=89.7, Expect=2e-23]} {Dmel: FBgn0033238, azot, ahuizotl, [Score=84.0, Expect=3e-21]} {Celegans: WBGene00017394, cal-8, CALmodulin related genes, [Score=75.5, Expect=5e-18]} {Smed: dd_Smed_v6_11942_0_1, dd_Smed_v6_11942_0_1, [Score=77.4, Expect=9e-19]} {RNA1509_9648} {RNA1310_21302} {RNA815_28645}

Mlig455_018919 {REF} {Length: 804} {Pfam: EF hand [PF00036.34, score=83.6]; EF-hand domain pair [PF13499.8, score=76.3]; EF-hand domain pair [PF13833.8, score=67.5]; EF-hand domain [PF13405.8, score=67.1]; EF hand [PF13202.8, score=48.4]; EF-hand domain [PF14658.8, score=27.2]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=20.1]; Family of unknown function (DUF5580) [PF17743.3, score=18.7]} {Human: ENSG00000178363, CALML3, calmodulin like 3, [Score=90.5, Expect=2e-23]} {Mouse: ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=89.7, Expect=2e-23]} {Dmel: FBgn0033238, azot, ahuizotl, [Score=84.0, Expect=3e-21]} {Celegans: WBGene00017394, cal-8, CALmodulin related genes, [Score=75.5, Expect=5e-18]} {Smed: dd_Smed_v6_11942_0_1, dd_Smed_v6_11942_0_1, [Score=77.4, Expect=9e-19]} {RNA1509_9648} {RNA1310_21302} {RNA815_28645}
5. MligTC455_10643 10 0.21 Mlig455_022637

Neo: -

Age: -

 0.987 - - - - 0.987 - Mlig455_022637 {REF} {Length: 691} {NoTransDecoderORF} {RNA1509_15535} {RNA1310_113487} {RNA815_5117}
6. MligTC455_17429 31 0.65 Mlig455_007460

Neo: -

Age: -

 IFT27 0.986 - - - - 0.986 - Mlig455_007460 {REF} {Length: 970} {Pfam: Ras family [PF00071.24, score=120.4]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=54.3]} {Human: ENSG00000100360, IFT27, intraflagellar transport 27, [Score=123, Expect=3e-34]} {Mouse: ENSMUSG00000016637, Ift27, intraflagellar transport 27, [Score=130, Expect=3e-37]} {Dmel: FBgn0015795, Rab7, [Score=84.7, Expect=1e-19]} {Celegans: WBGene00004271, rab-7, RAB family, [Score=85.1, Expect=7e-20]} {Smed: dd_Smed_v6_11026_0_1, dd_Smed_v6_11026_0_1, [Score=122, Expect=3e-34]} {RNA1310_14163} {RNA815_25254}
7. MligTC455_05711 314 6.55 Mlig455_054633, Mlig455_071110

Neo: -

Age: logFC(26M/2M)=-0.515

Region-enriched R7: 6.542/0.00000
Region-enriched R8: 5.115/0.00314
Region-enriched R6: 3.526/0.01930

Regeneration-depleted BL: -9.289
Regeneration-depleted R6: -7.567

 SVEP1 0.984 - - - - 0.984 -

Mlig455_054633 {REF} {Length: 4748} {Pfam: Tyrosine-protein kinase ephrin type A/B receptor-like [PF07699.15, score=113.5]; MAC/Perforin domain [PF01823.21, score=61.7]; Nine Cysteines Domain of family 3 GPCR [PF07562.16, score=41.9]} {Human: ENSG00000165124, SVEP1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=70.9, Expect=2e-11]} {Mouse: ENSMUSG00000109446, Gm9195, predicted gene 9195, [Score=74.3, Expect=9e-13]} {Dmel: FBgn0031879, uif, uninflatable, [Score=71.6, Expect=5e-12]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=73.9, Expect=8e-13]} {Smed: dd_Smed_v6_3432_0_1, dd_Smed_v6_3432_0_1, [Score=94.0, Expect=1e-20]} {RNA1509_17702, RNA1509_45494, RNA1509_52680, RNA1509_94} {RNA1310_1237.1, RNA1509_17702, RNA1509_45494, RNA1509_52680} {RNA1509_17702, RNA1509_45494, RNA1509_52680, RNA815_324.2}

Mlig455_071110 {REF} {Length: 4180} {Pfam: MAC/Perforin domain [PF01823.21, score=44.6]} {RNA1509_94} {RNA1310_1237.1} {RNA815_324.2}
8. MligTC455_00873 4331 90.22 Mlig455_021477

Neo: -

Age: Down-Down-Up

 0.982 - - - - 0.982 - Mlig455_021477 {REF} {Length: 796} {RNA1509_1530} {RNA1310_43551.1} {RNA815_23356}
9. MligTC455_00874 13475 280.72 Mlig455_062026, Mlig455_063227, Mlig455_067362

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.783

 0.982 - - - - 0.982 -

Mlig455_062026 {REF} {Length: 845} {RNA1509_1530} {RNA1310_43551.1} {RNA815_23356}

Mlig455_063227 {REF} {Length: 1882} {RNA1509_1530, RNA1509_170, RNA1509_6079} {RNA1310_43551.1, RNA1509_1530, RNA1509_170, RNA1509_6079} {RNA1509_1530, RNA1509_170, RNA1509_6079, RNA815_23356}

Mlig455_067362 {REF} {Length: 909} {RNA1509_1530} {RNA1310_43551.1} {RNA815_23356}
10. MligTC455_09592 23 0.47 Mlig455_043010

Neo: -

Age: -

 ANKAR 0.982 - - - - 0.982 - Mlig455_043010 {REF} {Length: 3259} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=29.0]; Ankyrin repeats (many copies) [PF13637.8, score=27.1]; Ankyrin repeats (many copies) [PF13857.8, score=23.6]} {Human: ENSG00000151687, ANKAR, ankyrin and armadillo repeat containing, [Score=53.1, Expect=2e-06]; ENSG00000173273, TNKS, tankyrase, [Score=52.0, Expect=4e-06]; ENSG00000285372, AC270292.3, tankyrase, [Score=52.0, Expect=4e-06]} {Mouse: ENSMUSG00000039342, Ankar, ankyrin and armadillo repeat containing, [Score=53.1, Expect=1e-06]; ENSMUSG00000031529, Tnks, tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase, [Score=52.4, Expect=2e-06]; ENSMUSG00000054708, Ankrd24, ankyrin repeat domain 24, [Score=52.0, Expect=3e-06]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=50.4, Expect=6e-06]} {Smed: dd_Smed_v6_10062_0_1, dd_Smed_v6_10062_0_1, [Score=176, Expect=4e-46]} {RNA1509_44824} {RNA1310_55542}
11. MligTC455_43314 15 0.32 Mlig455_020117

Neo: -

Age: -

 0.982 - - - - 0.982 - Mlig455_020117 {REF} {Length: 1424} {Pfam: PAN domain [PF00024.28, score=19.3]} {RNA1509_40165} {RNA1310_70907} {RNA815_15848}
12. MligTC455_35206 8 0.16 Mlig455_056719, Mlig455_060299

Neo: -

Age: -

 0.979 - - - - 0.979 -

Mlig455_056719 {REF} {Length: 2193} {Pfam: PIF1-like helicase [PF05970.16, score=103.1]; Galactosyltransferase [PF01762.23, score=87.9]; AAA domain [PF13604.8, score=22.4]; Fringe-like [PF02434.18, score=22.0]} {Mouse: ENSMUSG00000074004, B3gnt6, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase), [Score=68.2, Expect=8e-12]; ENSMUSG00000029431, B3gnt4, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4, [Score=67.4, Expect=1e-11]} {Dmel: FBgn0040373, CG3038, [Score=59.3, Expect=4e-09]} {Celegans: WBGene00021577, Y46B2A.2, [Score=85.5, Expect=4e-17]} {Smed: dd_Smed_v6_5936_0_2, dd_Smed_v6_5936_0_2, [RH, Score=80.1, Expect=4e-16]} {RNA1310_24693} {RNA815_36390}

Mlig455_060299 {REF} {Length: 2011} {Pfam: PIF1-like helicase [PF05970.16, score=103.1]; Galactosyltransferase [PF01762.23, score=88.3]; AAA domain [PF13604.8, score=21.5]; Fringe-like [PF02434.18, score=21.1]} {Mouse: ENSMUSG00000074004, B3gnt6, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase), [Score=68.2, Expect=8e-12]; ENSMUSG00000029431, B3gnt4, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4, [Score=66.2, Expect=3e-11]} {Dmel: FBgn0040373, CG3038, [Score=57.4, Expect=2e-08]} {Celegans: WBGene00021577, Y46B2A.2, [Score=85.5, Expect=4e-17]} {Smed: dd_Smed_v6_5936_0_2, dd_Smed_v6_5936_0_2, [Score=78.6, Expect=1e-15]} {RNA1310_24693} {RNA815_36390}
13. MligTC455_05491 7 0.14 Mlig455_012366

Neo: -

Age: -

 PRR9 0.978 - - - - 0.978 - Mlig455_012366 {REF} {Length: 810} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=44.7, Expect=9e-06]} {Celegans: WBGene00018026, F35A5.4, [Score=53.9, Expect=2e-08]}
14. MligTC455_33270 15 0.3 Mlig455_046913

Neo: Int S/G2/M

Age: -

 LARP1 0.978 - - - - 0.978 - Mlig455_046913 {REF} {Length: 2544} {TRANSSPLICED} {Pfam: La domain [PF05383.19, score=60.1]} {Human: ENSG00000155506, LARP1, La ribonucleoprotein domain family member 1, [Score=241, Expect=4e-67]} {Mouse: ENSMUSG00000037331, Larp1, La ribonucleoprotein domain family, member 1, [Score=242, Expect=1e-67]} {Dmel: FBgn0261618, larp, La related protein, [Score=229, Expect=1e-63]} {Celegans: WBGene00020097, larp-1, La-related protein 1, [Score=163, Expect=2e-41]} {Smed: dd_Smed_v6_1885_0_1, dd_Smed_v6_1885_0_1, [Score=215, Expect=5e-59]} {RNA1509_22739, RNA1509_28417, RNA1509_8493} {RNA1310_9234, RNA1509_22739, RNA1509_28417, RNA1509_8493} {RNA1509_22739, RNA1509_28417, RNA1509_8493, RNA815_13041}
15. MligTC455_40316 727 15.15 Mlig455_044270

Neo: -

Age: Up-Down-Down

 DNAH3 0.978 - - - - 0.978 - Mlig455_044270 {REF} {Length: 14059} {Pfam: Hydrolytic ATP binding site of dynein motor region [PF12774.9, score=512.5]; Dynein heavy chain, N-terminal region 2 [PF08393.15, score=451.2]; Dynein heavy chain C-terminal domain [PF18199.3, score=365.6]; P-loop containing dynein motor region D4 [PF12780.9, score=340.7]; ATP-binding dynein motor region [PF12781.9, score=296.8]; P-loop containing dynein motor region [PF12775.9, score=216.9]; Microtubule-binding stalk of dynein motor [PF12777.9, score=170.7]; Dynein heavy chain AAA lid domain [PF18198.3, score=170.2]; Dynein heavy chain region D6 P-loop domain [PF03028.17, score=133.7]; Dynein heavy chain AAA lid domain [PF17852.3, score=86.8]; AAA domain (dynein-related subfamily) [PF07728.16, score=69.0]; AAA+ lid domain [PF17857.3, score=45.7]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=31.4]; AAA ATPase domain [PF13191.8, score=30.3]; AAA domain [PF13401.8, score=28.6]} {Human: ENSG00000158486, DNAH3, dynein axonemal heavy chain 3, [Score=3809, Expect=0.0]} {Mouse: ENSMUSG00000052273, Dnah3, dynein, axonemal, heavy chain 3, [Score=3845, Expect=0.0]} {Dmel: FBgn0035581, Dnah3, dynein, axonemal, heavy chain 3, [Score=3159, Expect=0.0]} {Celegans: WBGene00000962, dhc-1, Dynein heavy chain, cytoplasmic, [Score=1231, Expect=0.0]} {Smed: dd_Smed_v6_6941_0_1, dd_Smed_v6_6941_0_1, [Score=3395, Expect=0.0]} {RNA1509_2566} {RNA1310_85, RNA1509_2566} {RNA1509_2566, RNA815_37.1}
16. MligTC455_22046 151 3.14 Mlig455_059130

Neo: -

Age: -

Region-enriched R7: 4.034/0.00000

 0.977 - - - - 0.977 - Mlig455_059130 {REF} {Length: 2489} {RNA1509_3959} {RNA1310_35790} {RNA815_5295}
17. MligTC455_14954 32 0.66 Mlig455_051468, Mlig455_066698

Neo: -

Age: -

 0.976 - - - - 0.976 -

Mlig455_051468 {REF} {Length: 741} {NoTransDecoderORF}

Mlig455_066698 {REF} {Length: 2055} {Smed: dd_Smed_v6_5882_0_1, dd_Smed_v6_5882_0_1, [Score=41.2, Expect=1e-05]} {RNA1509_10844} {RNA1310_32662} {RNA815_30370}
18. MligTC455_25784 14 0.3 Mlig455_024332

Neo: -

Age: Up-Down-Up

 0.975 - - - - 0.975 - Mlig455_024332 {REF} {Length: 2323} {RNA1310_41538} {RNA815_33731}
19. MligTC455_41660 162 3.38 Mlig455_054021

Neo: -

Age: -

 0.975 - - - - 0.975 - Mlig455_054021 {REF} {Length: 441} {NoTransDecoderORF} {RNA1509_37967} {RNA1310_6299.1} {RNA815_1994.1}
20. MligTC455_02735 8 0.17 Mlig455_034508

Neo: -

Age: -

 0.974 - - - - 0.974 - Mlig455_034508 {REF} {Length: 1233} {NoTransDecoderORF} {RNA1310_63094.1}
21. MligTC455_03361 23 0.49 Mlig455_045846

Neo: -

Age: -

Regeneration-enriched R4: 8.309
Regeneration-enriched R3: 7.698
Regeneration-enriched R5: 6.907
Regeneration-enriched R2: 5.726

 0.974 - - - - 0.974 - Mlig455_045846 {REF} {Length: 525} {RNA1310_134422} {RNA815_64754}
22. MligTC455_23415 50 1.03 Mlig455_016621

Neo: -

Age: Up-Down-Down

Region-enriched R2: 5.308/0.00531

 0.974 - - - - 0.974 - Mlig455_016621 {REF} {Length: 6929} {Pfam: Pao retrotransposon peptidase [PF05380.15, score=182.3]; Family of unknown function (DUF5641) [PF18701.3, score=110.2]; Protein of unknown function (DUF1759) [PF03564.17, score=42.8]; Integrase zinc binding domain [PF17921.3, score=42.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=23.2]} {Smed: dd_Smed_v6_22202_0_1, dd_Smed_v6_22202_0_1, [Score=120, Expect=4e-31]} {RNA1509_14736} {RNA1310_64.1, RNA1509_14736} {RNA1509_14736, RNA815_7101}
23. MligTC455_10068 96 1.99 Mlig455_066097

Neo: -

Age: -

 0.972 - - - - 0.972 - Mlig455_066097 {REF} {Length: 776} {Pfam: EF hand [PF00036.34, score=46.7]; EF-hand domain pair [PF13499.8, score=41.3]; EF-hand domain [PF13405.8, score=39.9]; EF hand [PF13202.8, score=32.3]; EF-hand domain pair [PF13833.8, score=27.2]} {Celegans: WBGene00269435, T27C10.9, [Score=43.5, Expect=7e-06]} {Smed: dd_Smed_v6_23220_0_1, dd_Smed_v6_23220_0_1, [Score=46.2, Expect=9e-07]} {RNA1310_43617} {RNA815_21313}
24. MligTC455_35352 1664 34.67 Mlig455_067185

Neo: -

Age: -

Region-enriched R2: 1.216/0.01510

Regeneration-downregulated R6: -1.685

Regeneration-depleted R6: -1.685

 AF241726.2 0.972 - - - - 0.972 - Mlig455_067185 {REF} {Length: 1953} {Pfam: Tetraspanin family [PF00335.22, score=79.0]} {Human: ENSG00000250349, AF241726.2, novel proline rich Gla (G-carboxyglutamic acid) 1 (PRRG1) and tetraspanin 7 (TSPAN7) protein, [Score=60.5, Expect=6e-10]; ENSG00000156298, TSPAN7, tetraspanin 7, [Score=60.1, Expect=7e-10]} {Mouse: ENSMUSG00000067377, Tspan6, tetraspanin 6, [Score=61.2, Expect=2e-10]} {Dmel: FBgn0033129, Tsp42Eh, Tetraspanin 42Eh, [Score=45.8, Expect=1e-05]} {Smed: dd_Smed_v6_3175_0_1, dd_Smed_v6_3175_0_1, [Score=100, Expect=2e-24]} {RNA1509_46723, RNA1509_52812} {RNA1310_15363, RNA1509_46723, RNA1509_52812} {RNA1509_46723, RNA1509_52812, RNA815_5523}
25. MligTC455_52859 1033 21.52 Mlig455_049482

Neo: -

Age: logFC(26M/2M)=-0.394

 EFCAB10 0.972 - - - - 0.972 - Mlig455_049482 {REF} {Length: 648} {TRANSSPLICED} {Pfam: Family of unknown function (DUF5582) [PF17819.3, score=26.3]; Family of unknown function (DUF5586) [PF17824.3, score=24.5]} {Human: ENSG00000185055, EFCAB10, EF-hand calcium binding domain 10, [RH, Score=88.6, Expect=4e-23]} {Mouse: ENSMUSG00000020562, Efcab10, EF-hand calcium binding domain 10, [RH, Score=92.8, Expect=7e-25]} {Smed: dd_Smed_v6_6477_0_1, dd_Smed_v6_6477_0_1, [RH, Score=114, Expect=2e-33]} {RNA1509_32720} {RNA1310_54125.2, RNA1509_32720} {RNA1509_32720, RNA815_27872}
26. MligTC455_14862 26 0.54 Mlig455_019096

Neo: -

Age: -

 0.971 - - - - 0.971 - Mlig455_019096 {REF} {Length: 157} {NoTransDecoderORF} {RNA1509_49770} {RNA1310_64974} {RNA815_58078}
27. MligTC455_16171 51 1.07 Mlig455_001659, Mlig455_050105

Neo: -

Age: -

 0.971 - - - - 0.971 -

Mlig455_001659 {REF} {Length: 762}

Mlig455_050105 {REF} {Length: 859}
28. MligTC455_22039 12583 262.14 Mlig455_000790, Mlig455_034225

Neo: -

Age: -

Regeneration-downregulated BL: -1.468

Regeneration-depleted BL: -1.468

 0.97 - - - - 0.970 -

Mlig455_000790 {REF} {Length: 1737} {RNA1509_49165, RNA1509_58954, RNA1509_6428, RNA1509_8973} {RNA1310_29384, RNA1509_49165, RNA1509_58954, RNA1509_6428, RNA1509_8973} {RNA1509_49165, RNA1509_58954, RNA1509_6428, RNA1509_8973, RNA815_21159.1}

Mlig455_034225 {REF} {Length: 1337} {RNA1509_11486, RNA1509_12451, RNA1509_14531, RNA1509_46277, RNA1509_49166} {RNA1310_29384, RNA1509_11486, RNA1509_12451, RNA1509_14531, RNA1509_46277, RNA1509_49166} {RNA1509_11486, RNA1509_12451, RNA1509_14531, RNA1509_46277, RNA1509_49166, RNA815_21159.1}
29. MligTC455_53362 25 0.51 Mlig455_042367

Neo: -

Age: -

 0.97 - - - - 0.970 - Mlig455_042367 {REF} {Length: 186} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=86.3]; Endonuclease-reverse transcriptase [PF14529.8, score=45.3]} {Smed: dd_Smed_v6_16441_0_1, dd_Smed_v6_16441_0_1, [Score=71.6, Expect=8e-13]} {RNA1509_35522} {RNA1310_1411.2} {RNA815_8870}
30. MligTC455_13788 51 1.05 Mlig455_007698

Neo: -

Age: -

 0.969 - - - - 0.969 - Mlig455_007698 {REF} {Length: 1318} {RNA1310_34364}
31. MligTC455_15185 53 1.1 Mlig455_016658

Neo: -

Age: -

 0.969 - - - - 0.969 - Mlig455_016658 {REF} {Length: 721} {NoTransDecoderORF} {RNA1310_50815} {RNA815_27489}
32. MligTC455_40576 41 0.84 Mlig455_055992

Neo: -

Age: -

 0.968 - - - - 0.968 - Mlig455_055992 {REF} {Length: 1712} {Pfam: Bacterial protein of unknown function (DUF948) [PF06103.13, score=23.6]; IRSp53/MIM homology domain [PF08397.13, score=21.5]} {RNA1509_35632} {RNA1310_13000.1} {RNA815_16057}
33. MligTC455_10775 50 1.05 Mlig455_023939

Neo: -

Age: -

 GABBR1 0.967 - - - - 0.967 - Mlig455_023939 {REF} {Length: 3689} {TRANSSPLICED} {Pfam: 7 transmembrane sweet-taste receptor of 3 GCPR [PF00003.24, score=159.6]; Receptor family ligand binding region [PF01094.30, score=113.8]; Periplasmic binding protein [PF13458.8, score=20.4]} {Human: ENSG00000237112, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=166, Expect=5e-42]; ENSG00000206466, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=166, Expect=5e-42]; ENSG00000232569, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=166, Expect=5e-42]; ENSG00000237051, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=166, Expect=5e-42]; ENSG00000206511, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=166, Expect=5e-42]; ENSG00000204681, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=166, Expect=5e-42]; ENSG00000232632, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=166, Expect=5e-42]} {Mouse: ENSMUSG00000024462, Gabbr1, gamma-aminobutyric acid (GABA) B receptor, 1, [Score=166, Expect=6e-42]} {Dmel: FBgn0031275, GABA-B-R3, metabotropic GABA-B receptor subtype 3, [Score=151, Expect=3e-37]} {Celegans: WBGene00022675, gbb-2, GABA B receptor subunit; GABAB2 receptor subunit, [Score=123, Expect=8e-29]} {Smed: dd_Smed_v6_51663_0_1, dd_Smed_v6_51663_0_1, [Score=72.4, Expect=6e-14]} {RNA1509_12849} {RNA1310_9423.1} {RNA815_7350.2}
34. MligTC455_29034 114 2.38 Mlig455_046018, Mlig455_049535

Neo: -

Age: -

 0.966 - - - - 0.966 -

Mlig455_046018 {REF} {Length: 1348} {NoTransDecoderORF} {RNA1509_34915} {RNA1310_8956.1} {RNA815_20736.1}

Mlig455_049535 {REF} {Length: 1831} {NoTransDecoderORF} {RNA1509_51837} {RNA1310_8956.2} {RNA815_41033.2}
35. MligTC455_47199 2226 46.38 Mlig455_027640

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.577

 CALML5 0.966 - - - - 0.966 - Mlig455_027640 {REF} {Length: 1108} {Pfam: EF-hand domain pair [PF13499.8, score=87.5]; EF hand [PF00036.34, score=83.6]; EF-hand domain [PF13405.8, score=76.4]; EF hand [PF13202.8, score=70.4]; EF-hand domain pair [PF13833.8, score=44.4]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=30.0]; EF-hand domain [PF14658.8, score=21.6]; Dockerin type I domain [PF00404.20, score=21.2]} {Human: ENSG00000178372, CALML5, calmodulin like 5, [Score=63.2, Expect=7e-13]} {Mouse: ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=55.8, Expect=3e-10]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=57.4, Expect=5e-11]} {Celegans: WBGene00017394, cal-8, CALmodulin related genes, [Score=67.8, Expect=4e-15]} {Smed: dd_Smed_v6_5204_0_1, dd_Smed_v6_5204_0_1, [RH, Score=118, Expect=6e-35]} {RNA1509_5257} {RNA1310_35147} {RNA815_17506}
36. MligTC455_22617 36 0.76 Mlig455_041097

Neo: -

Age: Up-Down-Down

 0.964 - - - - 0.964 - Mlig455_041097 {REF} {Length: 3480} {Smed: dd_Smed_v6_28678_0_1, dd_Smed_v6_28678_0_1, [RH, Score=77.0, Expect=7e-15]} {RNA1310_21449}
37. MligTC455_23369 566 11.79 Mlig455_065621

Neo: -

Age: Up-Down-Up

Region-enriched R2: 2.701/0.03747

 HYDIN 0.964 - - - - 0.964 - Mlig455_065621 {REF} {Length: 7684} {Pfam: Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin [PF15780.7, score=100.7]; Transmembrane protein 131-like N-terminal [PF12371.10, score=42.4]; Protein of unknown function (DUF1573) [PF07610.13, score=39.4]; MYCBP-associated protein family [PF14646.8, score=33.6]; MSP (Major sperm protein) domain [PF00635.28, score=22.6]} {Human: ENSG00000283022, HYDIN, HYDIN, axonemal central pair apparatus protein, [Score=1239, Expect=0.0]; ENSG00000157423, HYDIN, HYDIN, axonemal central pair apparatus protein, [Score=1239, Expect=0.0]} {Mouse: ENSMUSG00000059854, Hydin, HYDIN, axonemal central pair apparatus protein, [Score=1286, Expect=0.0]} {Smed: dd_Smed_v6_7302_1_1, dd_Smed_v6_7302_1_1, [Score=1395, Expect=0.0]} {RNA1509_30047} {RNA1310_26.1} {RNA815_225}
38. MligTC455_28815 32 0.68 Mlig455_010912, Mlig455_020600, Mlig455_039274

Neo: Germline

Age: -

 SETMAR 0.964 - - - - 0.964 -

Mlig455_010912 {REF} {Length: 1948} {Pfam: HTH domain in Mos1 transposase [PF17906.3, score=34.6]; Homeodomain-like domain [PF13384.8, score=21.2]} {RNA1509_25192} {RNA1310_18261.1} {RNA815_38170}

Mlig455_020600 {REF} {Length: 1740} {Pfam: Homeodomain-like domain [PF13565.8, score=37.8]; Winged helix-turn-helix DNA-binding [PF13412.8, score=33.9]; AsnC-type helix-turn-helix domain [PF13404.8, score=27.3]; IclR helix-turn-helix domain [PF09339.12, score=25.2]; Winged helix-turn helix [PF13551.8, score=20.8]; Homeodomain-like domain [PF13384.8, score=20.2]; Helix-turn-helix domain [PF13936.8, score=19.4]} {RNA1509_25192} {RNA1310_12769.1} {RNA815_30119}

Mlig455_039274 {REF} {Length: 3746} {Pfam: Transposase (partial DDE domain) [PF01359.20, score=70.2]; DDE superfamily endonuclease [PF13358.8, score=44.2]; Winged helix-turn-helix DNA-binding [PF13412.8, score=34.6]; Homeodomain-like domain [PF13565.8, score=33.0]; Homeodomain-like domain [PF13384.8, score=28.7]; AsnC-type helix-turn-helix domain [PF13404.8, score=27.1]; HTH domain in Mos1 transposase [PF17906.3, score=26.2]; IclR helix-turn-helix domain [PF09339.12, score=22.2]; Winged helix-turn helix [PF13551.8, score=20.7]; Helix-turn-helix domain [PF13518.8, score=19.0]; Helix-turn-helix domain [PF13936.8, score=18.4]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=166, Expect=1e-45]} {Smed: dd_Smed_v6_13618_0_23, dd_Smed_v6_13618_0_23, [Score=70.5, Expect=5e-15]} {RNA1509_25192} {RNA1310_12769.1} {RNA815_30119}
39. MligTC455_07083 41 0.86 Mlig455_026981

Neo: -

Age: -

Regeneration-upregulated R2: 5.340

Regeneration-enriched R2: 5.340

 0.963 - - - - 0.963 - Mlig455_026981 {REF} {Length: 1749} {RNA1509_26375} {RNA1310_32197} {RNA815_16782.1}
40. MligTC455_28730 132 2.74 Mlig455_006525

Neo: -

Age: logFC(26M/2M)=-0.572

 ANKRD17 0.962 - - - - 0.962 - Mlig455_006525 {REF} {Length: 7680} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=261.1]; Ankyrin repeats (many copies) [PF13637.8, score=207.0]; Ankyrin repeat [PF13606.8, score=134.3]; Ankyrin repeat [PF00023.32, score=106.1]; Ankyrin repeats (many copies) [PF13857.8, score=97.8]; Mab-21 protein [PF03281.16, score=39.7]; Patatin phospholipase [PF12536.10, score=37.3]; HEAT repeats [PF13646.8, score=36.5]; Protein of unknown function (DUF3499) [PF12005.10, score=36.2]; Transcription factor BRX N-terminal domain [PF13713.8, score=24.2]} {Human: ENSG00000132466, ANKRD17, ankyrin repeat domain 17, [Score=154, Expect=1e-36]} {Mouse: ENSMUSG00000055204, Ankrd17, ankyrin repeat domain 17, [Score=147, Expect=1e-34]} {Dmel: FBgn0016920, nompC, no mechanoreceptor potential C, [Score=105, Expect=2e-22]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=117, Expect=4e-26]} {Smed: dd_Smed_v6_5303_0_2, dd_Smed_v6_5303_0_2, [Score=127, Expect=3e-29]} {RNA1509_27730} {RNA1310_4721} {RNA815_2426.1}
41. MligTC455_14288 9 0.19 Mlig455_016637

Neo: -

Age: -

 0.961 - - - - 0.961 - Mlig455_016637 {REF} {Length: 589} {TRANSSPLICED} {RNA1509_9130} {RNA1310_97954} {RNA815_32988}
42. MligTC455_19456 34 0.7 Mlig455_038677

Neo: -

Age: -

 0.961 - - - - 0.961 - Mlig455_038677 {REF} {Length: 1621} {TRANSSPLICED} {Smed: dd_Smed_v6_15258_0_1, dd_Smed_v6_15258_0_1, [Score=49.3, Expect=4e-07]} {RNA1310_112748}
43. MligTC455_46313 525 10.93 Mlig455_061072, Mlig455_061118

Neo: -

Age: Down-Up-Down

 0.961 - - - - 0.961 -

Mlig455_061072 {REF} {Length: 1336} {Pfam: Stathmin family [PF00836.21, score=30.8]} {Smed: dd_Smed_v6_512_0_1, dd_Smed_v6_512_0_1, [Score=63.2, Expect=3e-14]} {RNA1509_8850} {RNA1310_39143} {RNA815_16363}

Mlig455_061118 {REF} {Length: 1813} {Pfam: Stathmin family [PF00836.21, score=27.4]} {Smed: dd_Smed_v6_512_0_1, dd_Smed_v6_512_0_1, [Score=63.5, Expect=2e-14]} {RNA1509_8850} {RNA1310_39143} {RNA815_16363}
44. MligTC455_18127 401 8.35 Mlig455_023755, Mlig455_023767, Mlig455_023780

Neo: Irradiation

Age: -

Region-enriched R4: 2.984/0.01492

 0.96 - - - - 0.960 -

Mlig455_023755 {REF} {Length: 1717} {RNA1509_40513} {RNA1310_43090} {RNA815_32441}

Mlig455_023767 {REF} {Length: 2896} {RNA1509_40513} {RNA1310_43090, RNA1509_40513} {RNA1509_40513, RNA815_32441}

Mlig455_023780 {REF} {Length: 2579} {RNA1509_40513} {RNA1310_43090} {RNA815_32441}
45. MligTC455_37691 84 1.76 Mlig455_050364

Neo: -

Age: -

 0.96 - - - - 0.960 - Mlig455_050364 {REF} {Length: 832} {NoTransDecoderORF} {RNA1509_44223} {RNA1310_54802} {RNA815_64986}
46. MligTC455_37753 410 8.54 Mlig455_054901, Mlig455_065604

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.475

Region-enriched R2: 4.050/0.00069

 0.959 - - - - 0.959 -

Mlig455_054901 {REF} {Length: 2445} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=23.2]} {Celegans: WBGene00010315, F59B2.13, Putative G-protein coupled receptor F59B2.13, [RH, Score=58.5, Expect=6e-09]} {Smed: dd_Smed_v6_28468_0_1, dd_Smed_v6_28468_0_1, [Score=88.6, Expect=1e-18]} {RNA1509_30384} {RNA1310_34563.1} {RNA815_18979}

Mlig455_065604 {REF} {Length: 2387} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=22.9]} {Celegans: WBGene00010315, F59B2.13, Putative G-protein coupled receptor F59B2.13, [Score=55.1, Expect=9e-08]} {Smed: dd_Smed_v6_28468_0_1, dd_Smed_v6_28468_0_1, [Score=85.5, Expect=2e-17]} {RNA1509_30384} {RNA1310_34563.1} {RNA815_18979}
47. MligTC455_00321 20 0.42 Mlig455_042919

Neo: -

Age: -

 0.958 - - - - 0.958 - Mlig455_042919 {REF} {Length: 401} {RNA1509_45342} {RNA1310_136249}
48. MligTC455_07084 29 0.61 Mlig455_030713

Neo: -

Age: -

 0.958 - - - - 0.958 - Mlig455_030713 {REF} {Length: 1395} {RNA1509_26375} {RNA1310_32197} {RNA815_16782.1}
49. MligTC455_32840 284 5.92 Mlig455_048602

Neo: -

Age: -

 0.958 - - - - 0.958 - Mlig455_048602 {REF} {Length: 983} {NoTransDecoderORF} {RNA1509_43402} {RNA1310_54655.2, RNA1509_43402} {RNA1509_43402, RNA815_32429.1}
50. MligTC455_47165 11 0.23 Mlig455_029505, Mlig455_042977

Neo: Int S/G2/M

Age: -

 0.958 - - - - 0.958 -

Mlig455_029505 {REF} {Length: 1618} {Smed: dd_Smed_v6_83746_0_1, dd_Smed_v6_83746_0_1, [Score=43.1, Expect=6e-06]} {RNA1509_36923} {RNA1310_31801.1} {RNA815_57994}

Mlig455_042977 {REF} {Length: 562} {RNA1310_125827}
51. MligTC455_03360 18 0.38 Mlig455_045830

Neo: -

Age: -

 0.956 - - - - 0.956 - Mlig455_045830 {REF} {Length: 498} {RNA1310_134422} {RNA815_64754}
52. MligTC455_15930 17 0.36 Mlig455_047268

Neo: -

Age: -

Regeneration-downregulated R5: -3.478

Regeneration-depleted R5: -3.478

 0.956 - - - - 0.956 - Mlig455_047268 {REF} {Length: 572} {NoTransDecoderORF} {RNA1310_84082}
53. MligTC455_21523 317 6.61 Mlig455_029394

Neo: -

Age: -

Region-enriched R6: 2.246/0.01608

Regeneration-downregulated R6: -3.517

Regeneration-depleted R6: -3.517

 MYL4 0.956 - - - - 0.956 - Mlig455_029394 {REF} {Length: 861} {Pfam: EF-hand domain pair [PF13499.8, score=40.0]; EF hand [PF00036.34, score=25.2]; EF-hand domain pair [PF13833.8, score=24.8]; EF-hand domain [PF13405.8, score=22.4]} {Human: ENSG00000198336, MYL4, myosin light chain 4, [Score=57.4, Expect=7e-10]; ENSG00000160808, MYL3, myosin light chain 3, [Score=55.5, Expect=4e-09]} {Mouse: ENSMUSG00000059741, Myl3, myosin, light polypeptide 3, [Score=57.4, Expect=5e-10]; ENSMUSG00000061086, Myl4, myosin, light polypeptide 4, [Score=56.6, Expect=7e-10]} {Dmel: FBgn0004687, Mlc-c, Myosin light chain cytoplasmic, [Score=70.1, Expect=3e-15]} {Celegans: WBGene00011734, mlc-5, Myosin-2 essential light chain, [Score=61.6, Expect=3e-12]} {Smed: dd_Smed_v6_20435_0_1, dd_Smed_v6_20435_0_1, [Score=48.5, Expect=6e-07]} {RNA1509_43205} {RNA1310_45370, RNA1509_43205} {RNA1509_43205, RNA815_24120.1}
54. MligTC455_30991 997 20.78 Mlig455_018127

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 4.938

Region-enriched R4: 3.387/0.00094

 KLHL5 0.955 - - - - 0.955 - Mlig455_018127 {REF} {Length: 8448} {TRANSSPLICED} {Pfam: Kelch motif [PF01344.27, score=113.8]; Kelch motif [PF13964.8, score=87.8]; Kelch motif [PF07646.17, score=71.4]; BTB And C-terminal Kelch [PF07707.17, score=60.0]; Galactose oxidase, central domain [PF13418.8, score=44.3]; Kelch motif [PF13854.8, score=42.8]; Galactose oxidase, central domain [PF13415.8, score=36.2]; BTB/POZ domain [PF00651.33, score=30.2]} {Human: ENSG00000109790, KLHL5, kelch like family member 5, [Score=120, Expect=3e-28]} {Mouse: ENSMUSG00000054920, Klhl5, kelch-like 5, [Score=120, Expect=4e-28]} {Dmel: FBgn0037978, KLHL18, Kelch like family member 18, [Score=129, Expect=1e-31]} {Celegans: WBGene00020952, kel-8, Kelch-like protein 8, [Score=62.4, Expect=5e-10]} {Smed: dd_Smed_v6_1751_0_1, dd_Smed_v6_1751_0_1, [Score=97.1, Expect=5e-21]} {RNA1509_9219} {RNA1310_468, RNA1509_9219} {RNA1509_9219, RNA815_355.1}
55. MligTC455_26157 15 0.3 Mlig455_032680

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_032680 {REF} {Length: 2103} {Pfam: Inner membrane complex protein [PF12314.10, score=21.9]; Formin Homology Region 1 [PF06346.14, score=21.5]} {RNA1509_15870} {RNA1310_53917} {RNA815_13104.1}
56. MligTC455_25393 17 0.35 Mlig455_029045, Mlig455_029055

Neo: -

Age: -

 BIRC2, BIRC8 0.952 - - - - 0.952 -

Mlig455_029045 {REF} {Length: 3770} {Pfam: Inhibitor of Apoptosis domain [PF00653.23, score=80.4]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=47.6]; Prokaryotic RING finger family 4 [PF14447.8, score=20.1]} {Human: ENSG00000163098, BIRC8, baculoviral IAP repeat containing 8, [RH, Score=97.4, Expect=3e-22]} {Mouse: ENSMUSG00000025860, Xiap, X-linked inhibitor of apoptosis, [RH, Score=118, Expect=1e-27]} {Dmel: FBgn0015247, Diap2, Death-associated inhibitor of apoptosis 2, [Score=127, Expect=5e-31]} {Celegans: WBGene00017342, F10D7.5, [Score=49.3, Expect=7e-06]} {Smed: dd_Smed_v6_1803_0_1, dd_Smed_v6_1803_0_1, [RH, Score=65.9, Expect=3e-11]} {RNA1509_10778} {RNA1310_3284.1} {RNA815_964.1}

Mlig455_029055 {REF} {Length: 815} {Pfam: Inhibitor of Apoptosis domain [PF00653.23, score=51.9]} {Human: ENSG00000110330, BIRC2, baculoviral IAP repeat containing 2, [RH, Score=65.1, Expect=1e-11]} {Mouse: ENSMUSG00000057367, Birc2, baculoviral IAP repeat-containing 2, [Score=60.5, Expect=5e-10]; ENSMUSG00000032000, Birc3, baculoviral IAP repeat-containing 3, [Score=59.7, Expect=1e-09]} {Dmel: FBgn0015247, Diap2, Death-associated inhibitor of apoptosis 2, [Score=55.5, Expect=2e-08]} {Smed: dd_Smed_v6_1574_6_66, dd_Smed_v6_1574_6_66, [RH, Score=65.1, Expect=5e-12]} {RNA1509_10778} {RNA1310_42350} {RNA815_899.1}
57. MligTC455_33665 566 11.79 Mlig455_018419, Mlig455_018421, Mlig455_019322, Mlig455_048837

Neo: -

Age: logFC(26M/2M)=-1.062

Region-enriched R2: 2.245/0.00138

 0.952 - - - - 0.952 -

Mlig455_018419 {REF} {Length: 629} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_25254} {RNA1310_23746} {RNA815_16073}

Mlig455_018421 {REF} {Length: 1329} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_25254} {RNA1310_31113} {RNA815_16073}

Mlig455_019322 {REF} {Length: 6075} {RNA1509_38197, RNA1509_56039} {RNA1310_15214.1, RNA1509_56039} {RNA1509_56039, RNA815_15612}

Mlig455_048837 {REF} {Length: 2037} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_15574, RNA1509_25254, RNA1509_35176} {RNA1310_31113, RNA1509_15574, RNA1509_25254, RNA1509_35176} {RNA1509_15574, RNA1509_25254, RNA1509_35176, RNA815_16073}
58. MligTC455_20923 1907 39.74 Mlig455_003638

Neo: -

Age: Down-Up-Down

 SIRT6 0.95 - - - - 0.950 - Mlig455_003638 {REF} {Length: 2575} {Pfam: Sir2 family [PF02146.19, score=104.8]} {Human: ENSG00000077463, SIRT6, sirtuin 6, [Score=184, Expect=2e-54]} {Mouse: ENSMUSG00000034748, Sirt6, sirtuin 6, [Score=180, Expect=2e-53]} {Dmel: FBgn0037802, Sirt6, Sirtuin 6, [Score=190, Expect=1e-57]} {Celegans: WBGene00004803, sir-2.4, NAD-dependent protein deacetylase sir-2.4, [Score=129, Expect=1e-34]} {Smed: dd_Smed_v6_10564_0_1, dd_Smed_v6_10564_0_1, [Score=189, Expect=2e-57]} {RNA1509_1125} {RNA1310_6401} {RNA815_10189}
59. MligTC455_26260 281 5.86 Mlig455_033712

Neo: -

Age: Up-Down-Down

 0.95 - - - - 0.950 - Mlig455_033712 {REF} {Length: 4818} {Pfam: Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=21.8]} {RNA1509_26340} {RNA1310_17276.1} {RNA815_2054.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA