M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_32840

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_32840 284 5.92 Mlig455_048602

Neo: -

Age: -

 Mlig455_048602 {REF} {Length: 983} {NoTransDecoderORF} {RNA1509_43402} {RNA1310_54655.2, RNA1509_43402} {RNA1509_43402, RNA815_32429.1}

Cumulative graph for MligTC455_32840

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.449 3.156 0.40703 1.00000
RegionR2 1.632 3.156 0.01475 0.12818
RegionR3 1.265 3.156 0.01477 0.19549
RegionR4 0.269 3.156 0.65494 0.95620
RegionR5 0.708 3.156 0.14793 0.39921
RegionR6 0.627 3.156 0.27699 0.86727
RegionR7 -0.385 3.156 0.63720 1.00000
RegionR8 -2.667 3.156 0.04232 0.40328

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -4.4 3.156 0.45980 1.00000
RegenerationR2 0.416 3.156 0.34409 0.77802
RegenerationR3 -0.116 3.156 0.83064 0.99106
RegenerationR4 0.232 3.156 0.69031 0.94954
RegenerationR5 0.443 3.156 0.36007 0.77132
RegenerationR6 -0.218 3.156 0.72023 0.93565
RegenerationBL -0.056 3.156 0.95912 1.00000
RegenerationTP 1.335 3.156 0.22773 0.67296


Genes with expression patterns similar to MligTC455_32840

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_32840 284 5.92 Mlig455_048602

Neo: -

Age: -

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_048602 {REF} {Length: 983} {NoTransDecoderORF} {RNA1509_43402} {RNA1310_54655.2, RNA1509_43402} {RNA1509_43402, RNA815_32429.1}
2. MligTC455_32841 276 5.74 Mlig455_048713

Neo: -

Age: Up-Up-Down

 IFT52 5.485 0.964 0.898 0.934 0.976 0.925 0.788 Mlig455_048713 {REF} {Length: 2689} {TRANSSPLICED} {Pfam: ABC-type uncharacterized transport system [PF09822.11, score=30.3]} {Human: ENSG00000101052, IFT52, intraflagellar transport 52, [RH, Score=518, Expect=0.0]} {Mouse: ENSMUSG00000017858, Ift52, intraflagellar transport 52, [RH, Score=532, Expect=0.0]} {Dmel: FBgn0031829, IFT52, Intraflagellar transport 52, [RH, Score=282, Expect=1e-90]} {Celegans: WBGene00003886, osm-6, Osm-6 protein, [RH, Score=305, Expect=7e-99]} {Smed: dd_Smed_v6_5043_0_1, dd_Smed_v6_5043_0_1, [RH, Score=537, Expect=0.0]} {RNA1509_8537} {RNA1310_16849, RNA1509_8537} {RNA1509_8537, RNA815_7203}
3. MligTC455_21813 524 10.92 Mlig455_006857

Neo: -

Age: -

 QRICH2 2.578 - - - 0.828 0.970 0.780 Mlig455_006857 {REF} {Length: 4774} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4795) [PF16043.7, score=162.6]} {Human: ENSG00000129646, QRICH2, glutamine rich 2, [Score=157, Expect=6e-39]} {Mouse: ENSMUSG00000070331, Qrich2, glutamine rich 2, [RH, Score=160, Expect=3e-41]} {Dmel: FBgn0031347, CG10869, [RH, Score=67.0, Expect=4e-11]} {Smed: dd_Smed_v6_6048_0_3, dd_Smed_v6_6048_0_3, [RH, Score=554, Expect=0.0]} {RNA1509_53937, RNA1509_56910} {RNA1310_3031.1, RNA1509_53937} {RNA1509_53937, RNA815_1272.1}
4. MligTC455_20880 444 9.25 Mlig455_025461

Neo: -

Age: Up-Up-Down

 B4GALT1 1.836 - - 0.870 - 0.966 - Mlig455_025461 {REF} {Length: 5145} {TRANSSPLICED} {Pfam: N-terminal region of glycosyl transferase group 7 [PF13733.8, score=155.9]; N-terminal domain of galactosyltransferase [PF02709.16, score=103.1]} {Human: ENSG00000086062, B4GALT1, beta-1,4-galactosyltransferase 1, [RH, Score=266, Expect=4e-85]; ENSG00000117411, B4GALT2, beta-1,4-galactosyltransferase 2, [RH, Score=265, Expect=6e-85]} {Mouse: ENSMUSG00000028413, B4galt1, UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1, [RH, Score=268, Expect=3e-86]; ENSMUSG00000028541, B4galt2, UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2, [RH, Score=265, Expect=5e-85]} {Dmel: FBgn0027538, beta4GalNAcTA, [RH, Score=259, Expect=1e-82]} {Celegans: WBGene00000269, bre-4, Beta-1,4-N-acetylgalactosaminyltransferase bre-4, [RH, Score=282, Expect=4e-92]} {Smed: dd_Smed_v6_12436_0_1, dd_Smed_v6_12436_0_1, [RH, Score=271, Expect=2e-88]} {RNA1509_19176} {RNA1310_18451, RNA1509_19176} {RNA1509_19176, RNA815_8932}
5. MligTC455_37691 84 1.76 Mlig455_050364

Neo: -

Age: -

 0.987 - - - - 0.987 - Mlig455_050364 {REF} {Length: 832} {NoTransDecoderORF} {RNA1509_44223} {RNA1310_54802} {RNA815_64986}
6. MligTC455_39984 512 10.67 Mlig455_039849

Neo: -

Age: -

 0.982 - - - - 0.982 - Mlig455_039849 {REF} {Length: 887} {RNA1509_47643} {RNA1310_53943, RNA1509_47643} {RNA1509_47643, RNA815_31128}
7. MligTC455_03361 23 0.49 Mlig455_045846

Neo: -

Age: -

Regeneration-enriched R4: 8.309
Regeneration-enriched R3: 7.698
Regeneration-enriched R5: 6.907
Regeneration-enriched R2: 5.726

 0.979 - - - - 0.979 - Mlig455_045846 {REF} {Length: 525} {RNA1310_134422} {RNA815_64754}
8. MligTC455_47958 1557 32.44 Mlig455_006488

Neo: -

Age: -

 TRPT1 0.979 - - - - 0.979 - Mlig455_006488 {REF} {Length: 3354} {TRANSSPLICED} {Pfam: RNA 2'-phosphotransferase, Tpt1 / KptA family [PF01885.18, score=227.2]} {Human: ENSG00000149743, TRPT1, tRNA phosphotransferase 1, [RH, Score=187, Expect=9e-58]} {Mouse: ENSMUSG00000047656, Trpt1, tRNA phosphotransferase 1, [RH, Score=176, Expect=1e-53]} {Dmel: FBgn0053057, CG33057, [Score=139, Expect=4e-40]} {Smed: dd_Smed_v6_5292_0_1, dd_Smed_v6_5292_0_1, [RH, Score=179, Expect=8e-55]} {RNA1509_12721, RNA1509_49638} {RNA1310_22579, RNA1509_49638} {RNA1509_49638, RNA815_13471.1}
9. MligTC455_26260 281 5.86 Mlig455_033712

Neo: -

Age: Up-Down-Down

 0.977 - - - - 0.977 - Mlig455_033712 {REF} {Length: 4818} {Pfam: Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=21.8]} {RNA1509_26340} {RNA1310_17276.1} {RNA815_2054.1}
10. MligTC455_29003 223 4.64 Mlig455_066978

Neo: -

Age: -

 0.975 - - - - 0.975 - Mlig455_066978 {REF} {Length: 5329} {RNA1509_29353} {RNA1310_4523} {RNA815_17419}
11. MligTC455_03360 18 0.38 Mlig455_045830

Neo: -

Age: -

 0.972 - - - - 0.972 - Mlig455_045830 {REF} {Length: 498} {RNA1310_134422} {RNA815_64754}
12. MligTC455_18127 401 8.35 Mlig455_023755, Mlig455_023767, Mlig455_023780

Neo: Irradiation

Age: -

Region-enriched R4: 2.984/0.01492

 0.972 - - - - 0.972 -

Mlig455_023755 {REF} {Length: 1717} {RNA1509_40513} {RNA1310_43090} {RNA815_32441}

Mlig455_023767 {REF} {Length: 2896} {RNA1509_40513} {RNA1310_43090, RNA1509_40513} {RNA1509_40513, RNA815_32441}

Mlig455_023780 {REF} {Length: 2579} {RNA1509_40513} {RNA1310_43090} {RNA815_32441}
13. MligTC455_28121 122 2.54 Mlig455_003280

Neo: -

Age: -

 0.972 - - - - 0.972 - Mlig455_003280 {REF} {Length: 2786} {RNA1509_13222} {RNA1310_34828.2} {RNA815_11419.1}
14. MligTC455_53853 563 11.74 Mlig455_016298

Neo: -

Age: logFC(26M/2M)=-0.225

 KIDINS220 0.971 - - - - 0.971 - Mlig455_016298 {REF} {Length: 5886} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=173.0]; Ankyrin repeats (many copies) [PF13857.8, score=78.1]; Ankyrin repeats (many copies) [PF13637.8, score=76.0]; Ankyrin repeat [PF13606.8, score=68.2]; Ankyrin repeat [PF00023.32, score=60.7]; Caspase domain [PF00656.24, score=55.9]; Mab-21 protein [PF03281.16, score=40.6]} {Human: ENSG00000134313, KIDINS220, kinase D interacting substrate 220, [Score=85.1, Expect=9e-16]} {Mouse: ENSMUSG00000036333, Kidins220, kinase D-interacting substrate 220, [Score=84.7, Expect=8e-16]} {Dmel: FBgn0039590, CG10011, [Score=74.7, Expect=6e-13]} {Celegans: WBGene00006490, kdin-1, KiDINs220 (Vertebrate scaffold protein) homolog, [Score=81.6, Expect=3e-15]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=68.9, Expect=2e-11]} {RNA1509_59871, RNA1509_7214} {RNA1310_1541, RNA1509_59871, RNA1509_7214} {RNA1509_59871, RNA1509_7214, RNA815_372}
15. MligTC455_38701 102 2.13 Mlig455_015653, Mlig455_023761

Neo: -

Age: -

 ANK1, FPGT-TNNI3K 0.97 - - - - 0.970 -

Mlig455_015653 {REF} {Length: 5454} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=72.8]; Ankyrin repeats (many copies) [PF13857.8, score=71.0]; Ankyrin repeats (many copies) [PF13637.8, score=55.5]; Ankyrin repeat [PF00023.32, score=54.3]; Ankyrin repeat [PF13606.8, score=41.5]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=72.0, Expect=2e-15]; ENSG00000154065, ANKRD29, ankyrin repeat domain 29, [Score=70.1, Expect=3e-15]; ENSG00000151458, ANKRD50, ankyrin repeat domain 50, [Score=68.6, Expect=3e-14]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=74.7, Expect=1e-16]} {Dmel: FBgn0261554, CG42672, [Score=63.9, Expect=5e-13]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=67.8, Expect=2e-14]} {Smed: dd_Smed_v6_9936_0_1, dd_Smed_v6_9936_0_1, [Score=77.8, Expect=5e-18]} {RNA1509_28959} {RNA1310_10537} {RNA815_15195}

Mlig455_023761 {REF} {Length: 3109} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=70.7]; Ankyrin repeat [PF00023.32, score=65.6]; Ankyrin repeats (many copies) [PF13637.8, score=57.1]; Ankyrin repeat [PF13606.8, score=46.0]; Ankyrin repeats (many copies) [PF13857.8, score=45.3]; Mab-21 protein [PF03281.16, score=25.8]} {Human: ENSG00000259030, FPGT-TNNI3K, FPGT-TNNI3K readthrough, [Score=77.8, Expect=2e-14]; ENSG00000116783, TNNI3K, TNNI3 interacting kinase, [Score=77.4, Expect=3e-14]; ENSG00000029534, ANK1, ankyrin 1, [Score=75.9, Expect=1e-13]; ENSG00000151150, ANK3, ankyrin 3, [Score=75.1, Expect=2e-13]; ENSG00000085382, HACE1, HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1, [Score=74.7, Expect=2e-13]} {Mouse: ENSMUSG00000040086, Tnni3k, TNNI3 interacting kinase, [Score=82.4, Expect=5e-16]} {Dmel: FBgn0031473, CG3104, [Score=82.4, Expect=5e-17]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=74.7, Expect=8e-14]} {Smed: dd_Smed_v6_9936_0_1, dd_Smed_v6_9936_0_1, [Score=77.8, Expect=5e-15]} {RNA1509_26004} {RNA1310_3906.1} {RNA815_1664.1}
16. MligTC455_33665 566 11.79 Mlig455_018419, Mlig455_018421, Mlig455_019322, Mlig455_048837

Neo: -

Age: logFC(26M/2M)=-1.062

Region-enriched R2: 2.245/0.00138

 0.969 - - - - 0.969 -

Mlig455_018419 {REF} {Length: 629} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_25254} {RNA1310_23746} {RNA815_16073}

Mlig455_018421 {REF} {Length: 1329} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_25254} {RNA1310_31113} {RNA815_16073}

Mlig455_019322 {REF} {Length: 6075} {RNA1509_38197, RNA1509_56039} {RNA1310_15214.1, RNA1509_56039} {RNA1509_56039, RNA815_15612}

Mlig455_048837 {REF} {Length: 2037} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_15574, RNA1509_25254, RNA1509_35176} {RNA1310_31113, RNA1509_15574, RNA1509_25254, RNA1509_35176} {RNA1509_15574, RNA1509_25254, RNA1509_35176, RNA815_16073}
17. MligTC455_40576 41 0.84 Mlig455_055992

Neo: -

Age: -

 0.969 - - - - 0.969 - Mlig455_055992 {REF} {Length: 1712} {Pfam: Bacterial protein of unknown function (DUF948) [PF06103.13, score=23.6]; IRSp53/MIM homology domain [PF08397.13, score=21.5]} {RNA1509_35632} {RNA1310_13000.1} {RNA815_16057}
18. MligTC455_47199 2226 46.38 Mlig455_027640

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.577

 CALML5 0.969 - - - - 0.969 - Mlig455_027640 {REF} {Length: 1108} {Pfam: EF-hand domain pair [PF13499.8, score=87.5]; EF hand [PF00036.34, score=83.6]; EF-hand domain [PF13405.8, score=76.4]; EF hand [PF13202.8, score=70.4]; EF-hand domain pair [PF13833.8, score=44.4]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=30.0]; EF-hand domain [PF14658.8, score=21.6]; Dockerin type I domain [PF00404.20, score=21.2]} {Human: ENSG00000178372, CALML5, calmodulin like 5, [Score=63.2, Expect=7e-13]} {Mouse: ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=55.8, Expect=3e-10]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=57.4, Expect=5e-11]} {Celegans: WBGene00017394, cal-8, CALmodulin related genes, [Score=67.8, Expect=4e-15]} {Smed: dd_Smed_v6_5204_0_1, dd_Smed_v6_5204_0_1, [RH, Score=118, Expect=6e-35]} {RNA1509_5257} {RNA1310_35147} {RNA815_17506}
19. MligTC455_30991 997 20.78 Mlig455_018127

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 4.938

Region-enriched R4: 3.387/0.00094

 KLHL5 0.968 - - - - 0.968 - Mlig455_018127 {REF} {Length: 8448} {TRANSSPLICED} {Pfam: Kelch motif [PF01344.27, score=113.8]; Kelch motif [PF13964.8, score=87.8]; Kelch motif [PF07646.17, score=71.4]; BTB And C-terminal Kelch [PF07707.17, score=60.0]; Galactose oxidase, central domain [PF13418.8, score=44.3]; Kelch motif [PF13854.8, score=42.8]; Galactose oxidase, central domain [PF13415.8, score=36.2]; BTB/POZ domain [PF00651.33, score=30.2]} {Human: ENSG00000109790, KLHL5, kelch like family member 5, [Score=120, Expect=3e-28]} {Mouse: ENSMUSG00000054920, Klhl5, kelch-like 5, [Score=120, Expect=4e-28]} {Dmel: FBgn0037978, KLHL18, Kelch like family member 18, [Score=129, Expect=1e-31]} {Celegans: WBGene00020952, kel-8, Kelch-like protein 8, [Score=62.4, Expect=5e-10]} {Smed: dd_Smed_v6_1751_0_1, dd_Smed_v6_1751_0_1, [Score=97.1, Expect=5e-21]} {RNA1509_9219} {RNA1310_468, RNA1509_9219} {RNA1509_9219, RNA815_355.1}
20. MligTC455_52859 1033 21.52 Mlig455_049482

Neo: -

Age: logFC(26M/2M)=-0.394

 EFCAB10 0.967 - - - - 0.967 - Mlig455_049482 {REF} {Length: 648} {TRANSSPLICED} {Pfam: Family of unknown function (DUF5582) [PF17819.3, score=26.3]; Family of unknown function (DUF5586) [PF17824.3, score=24.5]} {Human: ENSG00000185055, EFCAB10, EF-hand calcium binding domain 10, [RH, Score=88.6, Expect=4e-23]} {Mouse: ENSMUSG00000020562, Efcab10, EF-hand calcium binding domain 10, [RH, Score=92.8, Expect=7e-25]} {Smed: dd_Smed_v6_6477_0_1, dd_Smed_v6_6477_0_1, [RH, Score=114, Expect=2e-33]} {RNA1509_32720} {RNA1310_54125.2, RNA1509_32720} {RNA1509_32720, RNA815_27872}
21. MligTC455_22046 151 3.14 Mlig455_059130

Neo: -

Age: -

Region-enriched R7: 4.034/0.00000

 0.964 - - - - 0.964 - Mlig455_059130 {REF} {Length: 2489} {RNA1509_3959} {RNA1310_35790} {RNA815_5295}
22. MligTC455_23415 50 1.03 Mlig455_016621

Neo: -

Age: Up-Down-Down

Region-enriched R2: 5.308/0.00531

 0.964 - - - - 0.964 - Mlig455_016621 {REF} {Length: 6929} {Pfam: Pao retrotransposon peptidase [PF05380.15, score=182.3]; Family of unknown function (DUF5641) [PF18701.3, score=110.2]; Protein of unknown function (DUF1759) [PF03564.17, score=42.8]; Integrase zinc binding domain [PF17921.3, score=42.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=23.2]} {Smed: dd_Smed_v6_22202_0_1, dd_Smed_v6_22202_0_1, [Score=120, Expect=4e-31]} {RNA1509_14736} {RNA1310_64.1, RNA1509_14736} {RNA1509_14736, RNA815_7101}
23. MligTC455_53362 25 0.51 Mlig455_042367

Neo: -

Age: -

 0.962 - - - - 0.962 - Mlig455_042367 {REF} {Length: 186} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=86.3]; Endonuclease-reverse transcriptase [PF14529.8, score=45.3]} {Smed: dd_Smed_v6_16441_0_1, dd_Smed_v6_16441_0_1, [Score=71.6, Expect=8e-13]} {RNA1509_35522} {RNA1310_1411.2} {RNA815_8870}
24. MligTC455_31865 130 2.71 Mlig455_007329

Neo: -

Age: Up-Down-Down

 0.961 - - - - 0.961 - Mlig455_007329 {REF} {Length: 3948} {Pfam: Chorion protein [PF01723.18, score=21.5]} {RNA1509_44743} {RNA1310_5450.1} {RNA815_7717.1}
25. MligTC455_07083 41 0.86 Mlig455_026981

Neo: -

Age: -

Regeneration-upregulated R2: 5.340

Regeneration-enriched R2: 5.340

 0.96 - - - - 0.960 - Mlig455_026981 {REF} {Length: 1749} {RNA1509_26375} {RNA1310_32197} {RNA815_16782.1}
26. MligTC455_14954 32 0.66 Mlig455_051468, Mlig455_066698

Neo: -

Age: -

 0.96 - - - - 0.960 -

Mlig455_051468 {REF} {Length: 741} {NoTransDecoderORF}

Mlig455_066698 {REF} {Length: 2055} {Smed: dd_Smed_v6_5882_0_1, dd_Smed_v6_5882_0_1, [Score=41.2, Expect=1e-05]} {RNA1509_10844} {RNA1310_32662} {RNA815_30370}
27. MligTC455_49807 1833 38.18 Mlig455_070163

Neo: -

Age: Down-Up-Up

 RAC1 0.96 - - - - 0.960 - Mlig455_070163 {REF} {Length: 1370} {Pfam: Ras family [PF00071.24, score=145.4]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=77.9]; ADP-ribosylation factor family [PF00025.23, score=46.0]; Elongation factor Tu GTP binding domain [PF00009.29, score=27.8]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=139, Expect=3e-41]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=137, Expect=1e-40]; ENSG00000119729, RHOQ, ras homolog family member Q, [Score=136, Expect=5e-40]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=136, Expect=4e-40]; ENSG00000177105, RHOG, ras homolog family member G, [Score=135, Expect=1e-39]; ENSG00000070831, CDC42, cell division cycle 42, [Score=134, Expect=2e-39]; ENSG00000285721, AL031281.2, novel protein, identical to cell division cycle 42 (GTP binding protein, 25kDa) CDC42, [Score=134, Expect=2e-39]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=139, Expect=2e-41]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=137, Expect=7e-41]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=136, Expect=2e-40]; ENSMUSG00000024143, Rhoq, ras homolog family member Q, [Score=136, Expect=4e-40]; ENSMUSG00000073982, Rhog, ras homolog family member G, [Score=135, Expect=7e-40]; ENSMUSG00000006699, Cdc42, cell division cycle 42, [Score=134, Expect=1e-39]} {Dmel: FBgn0010333, Rac1, [Score=135, Expect=2e-40]} {Celegans: WBGene00003239, mig-2, Rac-like GTPase, [Score=144, Expect=1e-43]} {Smed: dd_Smed_v6_913_0_1, dd_Smed_v6_913_0_1, [Score=137, Expect=4e-41]} {RNA1509_14417} {RNA1310_34688.1} {RNA815_20638}
28. MligTC455_00408 55 1.15 Mlig455_045515

Neo: -

Age: -

Regeneration-upregulated R2: 5.953

Regeneration-enriched R2: 5.953

 0.959 - - - - 0.959 - Mlig455_045515 {REF} {Length: 707} {NoTransDecoderORF}
29. MligTC455_00096 11 0.24 Mlig455_014594

Neo: -

Age: -

 0.958 - - - - 0.958 - Mlig455_014594 {REF} {Length: 474} {NoTransDecoderORF} {RNA1310_4616.1} {RNA815_5995}
30. MligTC455_45040 558 11.63 Mlig455_030496

Neo: -

Age: -

 MMAA 0.958 - - - - - 0.958 Mlig455_030496 {REF} {Length: 2382} {TRANSSPLICED} {Pfam: Methylmalonyl Co-A mutase-associated GTPase MeaB [PF03308.18, score=304.5]; CobW/HypB/UreG, nucleotide-binding domain [PF02492.21, score=29.8]} {Human: ENSG00000151611, MMAA, methylmalonic aciduria (cobalamin deficiency) cblA type, [RH, Score=303, Expect=5e-100]} {Mouse: ENSMUSG00000037022, Mmaa, methylmalonic aciduria (cobalamin deficiency) type A, [RH, Score=315, Expect=9e-105]} {Celegans: WBGene00020169, mmaa-1, Methylmalonic aciduria type A homolog, mitochondrial, [RH, Score=337, Expect=1e-113]} {Smed: dd_Smed_v6_7238_0_1, dd_Smed_v6_7238_0_1, [RH, Score=310, Expect=9e-104]} {RNA1509_15100, RNA1509_18380, RNA1509_44023, RNA1509_6618} {RNA1310_14903.1, RNA1509_15100, RNA1509_18380, RNA1509_44023, RNA1509_6618} {RNA1509_15100, RNA1509_18380, RNA1509_44023, RNA1509_6618, RNA815_10061}
31. MligTC455_05491 7 0.14 Mlig455_012366

Neo: -

Age: -

 PRR9 0.957 - - - - 0.957 - Mlig455_012366 {REF} {Length: 810} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=44.7, Expect=9e-06]} {Celegans: WBGene00018026, F35A5.4, [Score=53.9, Expect=2e-08]}
32. MligTC455_26266 86 1.78 Mlig455_045377

Neo: -

Age: -

Region-enriched R4: 4.358/0.01873

 CDR1 0.957 - - - - 0.957 - Mlig455_045377 {REF} {Length: 1870} {Pfam: Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=44.3]} {Human: ENSG00000184258, CDR1, cerebellar degeneration related protein 1, [Score=47.0, Expect=1e-05]} {RNA1509_20888} {RNA1310_5450.1} {RNA815_13104.1}
33. MligTC455_29034 114 2.38 Mlig455_046018, Mlig455_049535

Neo: -

Age: -

 0.957 - - - - 0.957 -

Mlig455_046018 {REF} {Length: 1348} {NoTransDecoderORF} {RNA1509_34915} {RNA1310_8956.1} {RNA815_20736.1}

Mlig455_049535 {REF} {Length: 1831} {NoTransDecoderORF} {RNA1509_51837} {RNA1310_8956.2} {RNA815_41033.2}
34. MligTC455_37055 34 0.71 Mlig455_064258

Neo: -

Age: -

 0.957 - - - - 0.957 - Mlig455_064258 {REF} {Length: 378} {RNA1509_26115} {RNA1310_95542} {RNA815_43072}
35. MligTC455_40316 727 15.15 Mlig455_044270

Neo: -

Age: Up-Down-Down

 DNAH3 0.957 - - - - 0.957 - Mlig455_044270 {REF} {Length: 14059} {Pfam: Hydrolytic ATP binding site of dynein motor region [PF12774.9, score=512.5]; Dynein heavy chain, N-terminal region 2 [PF08393.15, score=451.2]; Dynein heavy chain C-terminal domain [PF18199.3, score=365.6]; P-loop containing dynein motor region D4 [PF12780.9, score=340.7]; ATP-binding dynein motor region [PF12781.9, score=296.8]; P-loop containing dynein motor region [PF12775.9, score=216.9]; Microtubule-binding stalk of dynein motor [PF12777.9, score=170.7]; Dynein heavy chain AAA lid domain [PF18198.3, score=170.2]; Dynein heavy chain region D6 P-loop domain [PF03028.17, score=133.7]; Dynein heavy chain AAA lid domain [PF17852.3, score=86.8]; AAA domain (dynein-related subfamily) [PF07728.16, score=69.0]; AAA+ lid domain [PF17857.3, score=45.7]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=31.4]; AAA ATPase domain [PF13191.8, score=30.3]; AAA domain [PF13401.8, score=28.6]} {Human: ENSG00000158486, DNAH3, dynein axonemal heavy chain 3, [Score=3809, Expect=0.0]} {Mouse: ENSMUSG00000052273, Dnah3, dynein, axonemal, heavy chain 3, [Score=3845, Expect=0.0]} {Dmel: FBgn0035581, Dnah3, dynein, axonemal, heavy chain 3, [Score=3159, Expect=0.0]} {Celegans: WBGene00000962, dhc-1, Dynein heavy chain, cytoplasmic, [Score=1231, Expect=0.0]} {Smed: dd_Smed_v6_6941_0_1, dd_Smed_v6_6941_0_1, [Score=3395, Expect=0.0]} {RNA1509_2566} {RNA1310_85, RNA1509_2566} {RNA1509_2566, RNA815_37.1}
36. MligTC455_47952 92 1.91 Mlig455_021022

Neo: -

Age: -

 0.957 - - - - 0.957 - Mlig455_021022 {REF} {Length: 2775} {NoTransDecoderORF} {RNA1509_55970} {RNA1310_14089.1} {RNA815_36615}
37. MligTC455_26935 289 6.01 Mlig455_037791

Neo: -

Age: -

 0.956 - - - - 0.956 - Mlig455_037791 {REF} {Length: 3234} {Pfam: Innexin [PF00876.20, score=414.3]} {Dmel: FBgn0085387, shakB, shaking B, [Score=127, Expect=2e-31]} {Celegans: WBGene00002123, inx-1, Innexin, [Score=343, Expect=3e-114]} {Smed: dd_Smed_v6_11077_0_2, dd_Smed_v6_11077_0_2, [Score=479, Expect=1e-166]} {RNA1509_20876} {RNA1310_15813} {RNA815_1848.1}
38. MligTC455_31906 195 4.06 Mlig455_068976

Neo: -

Age: Up-Up-Down

 0.956 - - - - 0.956 - Mlig455_068976 {REF} {Length: 6455} {Pfam: Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=26.5]} {RNA1509_31473} {RNA1310_5450.1} {RNA815_16253.2}
39. MligTC455_00321 20 0.42 Mlig455_042919

Neo: -

Age: -

 0.954 - - - - 0.954 - Mlig455_042919 {REF} {Length: 401} {RNA1509_45342} {RNA1310_136249}
40. MligTC455_26815 337 7.03 Mlig455_006254, Mlig455_048777

Neo: -

Age: -

 0.954 - - - - 0.954 -

Mlig455_006254 {REF} {Length: 1934} {RNA1509_8366} {RNA1310_70170} {RNA815_10373}

Mlig455_048777 {REF} {Length: 4020} {RNA1509_48783} {RNA1310_45647} {RNA815_47705}
41. MligTC455_29935 227 4.72 Mlig455_036978

Neo: -

Age: -

 0.954 - - - - 0.954 - Mlig455_036978 {REF} {Length: 7237} {RNA1509_2515} {RNA1310_11022.1} {RNA815_1043.2}
42. MligTC455_31866 621 12.93 Mlig455_023217, Mlig455_045753

Neo: -

Age: logFC(26M/2M)=0.454

Region-enriched R4: 4.034/0.04838

Regeneration-upregulated BL: 5.711

Regeneration-enriched BL: 5.711

 0.954 - - - - 0.954 -

Mlig455_023217 {REF} {Length: 4980} {Pfam: Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=31.5]} {RNA1509_12420} {RNA1310_5450.1} {RNA815_7136.1}

Mlig455_045753 {REF} {Length: 5962} {Pfam: Lectin C-type domain [PF00059.23, score=30.9]} {Smed: dd_Smed_v6_32483_0_1, dd_Smed_v6_32483_0_1, [Score=58.5, Expect=3e-10]} {RNA1509_22651, RNA1509_44006} {RNA1310_622.1, RNA1509_44006} {RNA1509_44006, RNA815_2514.1}
43. MligTC455_35352 1664 34.67 Mlig455_067185

Neo: -

Age: -

Region-enriched R2: 1.216/0.01510

Regeneration-downregulated R6: -1.685

Regeneration-depleted R6: -1.685

 AF241726.2 0.954 - - - - 0.954 - Mlig455_067185 {REF} {Length: 1953} {Pfam: Tetraspanin family [PF00335.22, score=79.0]} {Human: ENSG00000250349, AF241726.2, novel proline rich Gla (G-carboxyglutamic acid) 1 (PRRG1) and tetraspanin 7 (TSPAN7) protein, [Score=60.5, Expect=6e-10]; ENSG00000156298, TSPAN7, tetraspanin 7, [Score=60.1, Expect=7e-10]} {Mouse: ENSMUSG00000067377, Tspan6, tetraspanin 6, [Score=61.2, Expect=2e-10]} {Dmel: FBgn0033129, Tsp42Eh, Tetraspanin 42Eh, [Score=45.8, Expect=1e-05]} {Smed: dd_Smed_v6_3175_0_1, dd_Smed_v6_3175_0_1, [Score=100, Expect=2e-24]} {RNA1509_46723, RNA1509_52812} {RNA1310_15363, RNA1509_46723, RNA1509_52812} {RNA1509_46723, RNA1509_52812, RNA815_5523}
44. MligTC455_23369 566 11.79 Mlig455_065621

Neo: -

Age: Up-Down-Up

Region-enriched R2: 2.701/0.03747

 HYDIN 0.953 - - - - 0.953 - Mlig455_065621 {REF} {Length: 7684} {Pfam: Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin [PF15780.7, score=100.7]; Transmembrane protein 131-like N-terminal [PF12371.10, score=42.4]; Protein of unknown function (DUF1573) [PF07610.13, score=39.4]; MYCBP-associated protein family [PF14646.8, score=33.6]; MSP (Major sperm protein) domain [PF00635.28, score=22.6]} {Human: ENSG00000283022, HYDIN, HYDIN, axonemal central pair apparatus protein, [Score=1239, Expect=0.0]; ENSG00000157423, HYDIN, HYDIN, axonemal central pair apparatus protein, [Score=1239, Expect=0.0]} {Mouse: ENSMUSG00000059854, Hydin, HYDIN, axonemal central pair apparatus protein, [Score=1286, Expect=0.0]} {Smed: dd_Smed_v6_7302_1_1, dd_Smed_v6_7302_1_1, [Score=1395, Expect=0.0]} {RNA1509_30047} {RNA1310_26.1} {RNA815_225}
45. MligTC455_00874 13475 280.72 Mlig455_062026, Mlig455_063227, Mlig455_067362

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.783

 0.952 - - - - 0.952 -

Mlig455_062026 {REF} {Length: 845} {RNA1509_1530} {RNA1310_43551.1} {RNA815_23356}

Mlig455_063227 {REF} {Length: 1882} {RNA1509_1530, RNA1509_170, RNA1509_6079} {RNA1310_43551.1, RNA1509_1530, RNA1509_170, RNA1509_6079} {RNA1509_1530, RNA1509_170, RNA1509_6079, RNA815_23356}

Mlig455_067362 {REF} {Length: 909} {RNA1509_1530} {RNA1310_43551.1} {RNA815_23356}
46. MligTC455_43314 15 0.32 Mlig455_020117

Neo: -

Age: -

 0.952 - - - - 0.952 - Mlig455_020117 {REF} {Length: 1424} {Pfam: PAN domain [PF00024.28, score=19.3]} {RNA1509_40165} {RNA1310_70907} {RNA815_15848}
47. MligTC455_00873 4331 90.22 Mlig455_021477

Neo: -

Age: Down-Down-Up

 0.951 - - - - 0.951 - Mlig455_021477 {REF} {Length: 796} {RNA1509_1530} {RNA1310_43551.1} {RNA815_23356}
48. MligTC455_31877 43 0.89 Mlig455_024064

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_024064 {REF} {Length: 2516} {Pfam: Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=30.6]} {RNA1509_41356, RNA1509_42331} {RNA1310_5450.1, RNA1509_42331} {RNA1509_42331, RNA815_8149.1}
49. MligTC455_45889 999 20.82 Mlig455_016282

Neo: -

Age: Down-Up-Down

Regeneration-downregulated BL: -1.820

Regeneration-depleted BL: -1.820

 TMEM127 0.951 - - - - 0.951 - Mlig455_016282 {REF} {Length: 2723} {TRANSSPLICED} {Human: ENSG00000135956, TMEM127, transmembrane protein 127, [RH, Score=79.0, Expect=3e-16]} {Mouse: ENSMUSG00000034850, Tmem127, transmembrane protein 127, [RH, Score=80.1, Expect=9e-17]} {RNA1509_11709, RNA1509_44690} {RNA1310_6373.1, RNA1509_11709, RNA1509_44690} {RNA1509_11709, RNA1509_44690, RNA815_4313.1}
50. MligTC455_04965 9 0.19 Mlig455_011360

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_011360 {REF} {Length: 1990} {NoTransDecoderORF} {RNA1310_46919} {RNA815_64863}
51. MligTC455_06340 199 4.16 Mlig455_048216

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_048216 {REF} {Length: 2252} {RNA1509_2718} {RNA1310_486.2} {RNA815_161}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA