M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_00202

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_00202 10 0.20 Mlig455_058953

Neo: -

Age: -

 Mlig455_058953 {REF} {Length: 578} {NoTransDecoderORF} {RNA1509_54430} {RNA1310_59969} {RNA815_64986}

Cumulative graph for MligTC455_00202

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 - - - -
RegionR2 - - - -
RegionR3 - - - -
RegionR4 - - - -
RegionR5 - - - -
RegionR6 - - - -
RegionR7 - - - -
RegionR8 - - - -

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 - - - -
RegenerationR2 - - - -
RegenerationR3 - - - -
RegenerationR4 - - - -
RegenerationR5 - - - -
RegenerationR6 - - - -
RegenerationBL - - - -
RegenerationTP - - - -


Genes with expression patterns similar to MligTC455_00202

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_00202 10 0.2 Mlig455_058953

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_058953 {REF} {Length: 578} {NoTransDecoderORF} {RNA1509_54430} {RNA1310_59969} {RNA815_64986}
2. MligTC455_45221 50 1.04 Mlig455_057618, Mlig455_070815

Neo: -

Age: -

 0.991 - - - - 0.991 -

Mlig455_057618 {REF} {Length: 1114} {TRANSSPLICED} {Pfam: THAP domain [PF05485.14, score=32.4]} {RNA1310_77195} {RNA815_47791}

Mlig455_070815 {REF} {Length: 249} {NoTransDecoderORF} {RNA1310_77195} {RNA815_47791}
3. MligTC455_40248 33 0.68 Mlig455_056510

Neo: -

Age: Down-Up-Up

 0.982 - - - - 0.982 - Mlig455_056510 {REF} {Length: 1620} {RNA1310_66570} {RNA815_47280}
4. MligTC455_27313 61 1.27 Mlig455_031814, Mlig455_047613

Neo: -

Age: -

 WSCD2 0.981 - - - - 0.981 -

Mlig455_031814 {REF} {Length: 844} {Pfam: WSC domain [PF01822.21, score=66.1]; PAN domain [PF00024.28, score=19.7]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [Score=62.0, Expect=7e-11]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=60.5, Expect=1e-10]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=56.6, Expect=3e-09]} {Celegans: WBGene00005024, sqv-6, Xylosyltransferase sqv-6, [Score=48.5, Expect=1e-06]} {RNA1509_43359} {RNA1310_33892} {RNA815_23776.1}

Mlig455_047613 {REF} {Length: 843} {Pfam: WSC domain [PF01822.21, score=52.5]; PAN domain [PF00024.28, score=19.2]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [Score=52.0, Expect=5e-08]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=48.9, Expect=4e-07]} {RNA1509_43359} {RNA1310_33892} {RNA815_23776.1}
5. MligTC455_27789 78 1.63 Mlig455_069442

Neo: -

Age: Up-Down-Up

 RORB 0.98 - - - - 0.980 - Mlig455_069442 {REF} {Length: 2863} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=76.2]} {Human: ENSG00000198963, RORB, RAR related orphan receptor B, [Score=89.0, Expect=6e-18]; ENSG00000132170, PPARG, peroxisome proliferator activated receptor gamma, [Score=87.4, Expect=2e-17]; ENSG00000174738, NR1D2, nuclear receptor subfamily 1 group D member 2, [Score=87.0, Expect=3e-17]; ENSG00000069667, RORA, RAR related orphan receptor A, [Score=86.7, Expect=3e-17]; ENSG00000186951, PPARA, peroxisome proliferator activated receptor alpha, [Score=85.9, Expect=5e-17]; ENSG00000126368, NR1D1, nuclear receptor subfamily 1 group D member 1, [Score=85.9, Expect=8e-17]; ENSG00000112033, PPARD, peroxisome proliferator activated receptor delta, [Score=85.9, Expect=3e-17]} {Mouse: ENSMUSG00000021775, Nr1d2, nuclear receptor subfamily 1, group D, member 2, [Score=87.0, Expect=3e-17]; ENSMUSG00000000440, Pparg, peroxisome proliferator activated receptor gamma, [Score=87.0, Expect=2e-17]; ENSMUSG00000032238, Rora, RAR-related orphan receptor alpha, [Score=86.7, Expect=3e-17]; ENSMUSG00000020889, Nr1d1, nuclear receptor subfamily 1, group D, member 1, [Score=85.9, Expect=5e-17]; ENSMUSG00000002250, Ppard, peroxisome proliferator activator receptor delta, [Score=84.7, Expect=8e-17]; ENSMUSG00000017491, Rarb, retinoic acid receptor, beta, [Score=84.0, Expect=1e-16]; ENSMUSG00000036192, Rorb, RAR-related orphan receptor beta, [Score=84.0, Expect=1e-16]; ENSMUSG00000022383, Ppara, peroxisome proliferator activated receptor alpha, [Score=83.6, Expect=2e-16]} {Dmel: FBgn0000568, Eip75B, Ecdysone-induced protein 75B, [Score=90.9, Expect=2e-18]} {Celegans: WBGene00003675, nhr-85, Nuclear hormone receptor family member nhr-85, [Score=91.3, Expect=5e-19]} {Smed: dd_Smed_v6_9282_0_3, dd_Smed_v6_9282_0_3, [Score=90.9, Expect=7e-19]} {RNA1509_29043} {RNA1310_23980, RNA1509_29043} {RNA1509_29043, RNA815_15345}
6. MligTC455_33870 60 1.25 Mlig455_008442

Neo: -

Age: -

 KCNIP1 0.98 - - - - 0.980 - Mlig455_008442 {REF} {Length: 4465} {Pfam: EF hand [PF00036.34, score=66.1]; EF-hand domain [PF13405.8, score=54.5]; EF-hand domain pair [PF13499.8, score=53.6]; EF hand [PF13202.8, score=45.4]; EF-hand domain pair [PF13833.8, score=33.6]; Dockerin type I domain [PF00404.20, score=19.9]} {Human: ENSG00000182132, KCNIP1, potassium voltage-gated channel interacting protein 1, [Score=164, Expect=1e-49]; ENSG00000185774, KCNIP4, potassium voltage-gated channel interacting protein 4, [Score=157, Expect=5e-47]; ENSG00000115041, KCNIP3, potassium voltage-gated channel interacting protein 3, [Score=156, Expect=4e-46]} {Mouse: ENSMUSG00000053519, Kcnip1, Kv channel-interacting protein 1, [Score=165, Expect=3e-50]; ENSMUSG00000029088, Kcnip4, Kv channel interacting protein 4, [Score=157, Expect=3e-47]} {Dmel: FBgn0039380, CG5890, [Score=157, Expect=2e-47]} {Celegans: WBGene00008998, ncs-4, Neuronal Calcium Sensor family, [Score=110, Expect=4e-29]} {Smed: dd_Smed_v6_9727_0_1, dd_Smed_v6_9727_0_1, [Score=147, Expect=3e-43]} {RNA1509_22651} {RNA1310_622.1} {RNA815_2514.1}
7. MligTC455_11706 49 1.02 Mlig455_060087

Neo: -

Age: -

 0.979 - - - - 0.979 - Mlig455_060087 {REF} {Length: 497} {NoTransDecoderORF} {RNA1509_39225} {RNA1310_33523} {RNA815_31934}
8. MligTC455_34949 30 0.63 Mlig455_055437

Neo: -

Age: -

 RIMS1 0.979 - - - - 0.979 - Mlig455_055437 {REF} {Length: 5246} {Pfam: C2 domain [PF00168.32, score=104.4]; PDZ domain [PF17820.3, score=39.9]; PDZ domain [PF00595.26, score=32.1]; Piccolo Zn-finger [PF05715.15, score=24.7]; PDZ domain [PF13180.8, score=24.0]; FYVE-type zinc finger [PF02318.18, score=19.4]} {Human: ENSG00000079841, RIMS1, regulating synaptic membrane exocytosis 1, [RH, Score=239, Expect=2e-63]; ENSG00000176406, RIMS2, regulating synaptic membrane exocytosis 2, [RH, Score=238, Expect=2e-63]} {Mouse: ENSMUSG00000037386, Rims2, regulating synaptic membrane exocytosis 2, [RH, Score=241, Expect=3e-64]; ENSMUSG00000111628, Rims1, regulating synaptic membrane exocytosis 1, [RH, Score=240, Expect=1e-66]; ENSMUSG00000041670, Rims1, regulating synaptic membrane exocytosis 1, [RH, Score=240, Expect=1e-66]} {Dmel: FBgn0053547, Rim, Rab3 interacting molecule, [RH, Score=243, Expect=6e-65]} {Celegans: WBGene00006750, unc-10, Rab-3-interacting molecule unc-10, [RH, Score=187, Expect=1e-47]} {Smed: dd_Smed_v6_10734_0_1, dd_Smed_v6_10734_0_1, [RH, Score=281, Expect=6e-80]} {RNA1509_26372} {RNA1310_18417, RNA1509_26372} {RNA1509_26372, RNA815_9566}
9. MligTC455_19759 18 0.39 Mlig455_002694, Mlig455_002710

Neo: -

Age: -

 0.973 - - - - 0.973 -

Mlig455_002694 {REF} {Length: 1408} {RNA1310_38437} {RNA815_40458}

Mlig455_002710 {REF} {Length: 1745} {RNA1310_38437} {RNA815_40458}
10. MligTC455_17579 76 1.58 Mlig455_042836, Mlig455_045854, Mlig455_045870

Neo: -

Age: -

 RNF217 0.971 - - - - 0.971 -

Mlig455_042836 {REF} {Length: 3004} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=75.3]} {Human: ENSG00000146373, RNF217, ring finger protein 217, [Score=83.6, Expect=5e-16]} {Mouse: ENSMUSG00000063760, Rnf217, ring finger protein 217, [Score=83.2, Expect=4e-16]} {Dmel: FBgn0036082, CG12362, [Score=57.0, Expect=4e-08]} {Celegans: WBGene00020462, T12E12.1, Potential E3 ubiquitin-protein ligase ariadne-2, [Score=57.0, Expect=4e-08]} {Smed: dd_Smed_v6_7986_0_1, dd_Smed_v6_7986_0_1, [Score=61.2, Expect=1e-09]} {RNA1310_42946} {RNA815_24345}

Mlig455_045854 {REF} {Length: 3004} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=74.7]} {Human: ENSG00000146373, RNF217, ring finger protein 217, [Score=83.2, Expect=5e-16]} {Mouse: ENSMUSG00000063760, Rnf217, ring finger protein 217, [Score=83.2, Expect=4e-16]} {Dmel: FBgn0036082, CG12362, [Score=57.4, Expect=3e-08]} {Celegans: WBGene00020462, T12E12.1, Potential E3 ubiquitin-protein ligase ariadne-2, [Score=57.8, Expect=2e-08]} {Smed: dd_Smed_v6_7986_0_1, dd_Smed_v6_7986_0_1, [Score=61.2, Expect=1e-09]} {RNA1310_42946} {RNA815_24345}

Mlig455_045870 {REF} {Length: 3004} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=74.9]} {Human: ENSG00000146373, RNF217, ring finger protein 217, [Score=83.2, Expect=5e-16]} {Mouse: ENSMUSG00000063760, Rnf217, ring finger protein 217, [Score=83.2, Expect=4e-16]} {Dmel: FBgn0036082, CG12362, [Score=57.4, Expect=3e-08]} {Celegans: WBGene00020462, T12E12.1, Potential E3 ubiquitin-protein ligase ariadne-2, [Score=57.0, Expect=4e-08]} {Smed: dd_Smed_v6_7986_0_1, dd_Smed_v6_7986_0_1, [Score=61.2, Expect=1e-09]} {RNA1310_42946} {RNA815_24345}
11. MligTC455_36186 173 3.61 Mlig455_047649

Neo: -

Age: -

 KCNH7 0.971 - - - - 0.971 - Mlig455_047649 {REF} {Length: 3303} {Pfam: Ion transport protein [PF00520.33, score=116.4]; Ion channel [PF07885.18, score=46.0]; Cyclic nucleotide-binding domain [PF00027.31, score=43.7]; PAS domain [PF13426.9, score=39.2]; PAS fold [PF08447.14, score=21.5]; PAS fold [PF00989.27, score=19.1]} {Human: ENSG00000184611, KCNH7, potassium voltage-gated channel subfamily H member 7, [Score=795, Expect=0.0]; ENSG00000173826, KCNH6, potassium voltage-gated channel subfamily H member 6, [Score=788, Expect=0.0]; ENSG00000055118, KCNH2, potassium voltage-gated channel subfamily H member 2, [Score=773, Expect=0.0]} {Mouse: ENSMUSG00000059742, Kcnh7, potassium voltage-gated channel, subfamily H (eag-related), member 7, [Score=796, Expect=0.0]; ENSMUSG00000001901, Kcnh6, potassium voltage-gated channel, subfamily H (eag-related), member 6, [Score=793, Expect=0.0]; ENSMUSG00000038319, Kcnh2, potassium voltage-gated channel, subfamily H (eag-related), member 2, [Score=773, Expect=0.0]} {Dmel: FBgn0003353, sei, seizure, [Score=739, Expect=0.0]} {Celegans: WBGene00006830, unc-103, Potassium voltage-gated channel unc-103, [Score=714, Expect=0.0]} {Smed: dd_Smed_v6_12621_0_1, dd_Smed_v6_12621_0_1, [Score=775, Expect=0.0]} {RNA1509_16542} {RNA1310_5129.1} {RNA815_4089.1}
12. MligTC455_23875 10 0.2 Mlig455_047531

Neo: -

Age: -

 0.97 - - - - 0.970 - Mlig455_047531 {REF} {Length: 2692} {Pfam: Otopetrin [PF03189.15, score=34.6]} {RNA1509_19550} {RNA1310_33220} {RNA815_53207}
13. MligTC455_24155 8 0.17 Mlig455_009273

Neo: -

Age: -

 0.97 - - - - 0.970 - Mlig455_009273 {REF} {Length: 1370} {RNA1509_23058} {RNA1310_114501} {RNA815_752.2}
14. MligTC455_33725 46 0.96 Mlig455_059862

Neo: -

Age: -

 0.969 - - - - 0.969 - Mlig455_059862 {REF} {Length: 2526} {tRNA: Asp(GTC), score=67.3} {RNA1310_22634} {RNA815_27671}
15. MligTC455_54743 21 0.44 Mlig455_013519

Neo: -

Age: -

 0.969 - - - - 0.969 - Mlig455_013519 {REF} {Length: 76} {NoTransDecoderORF} {RNA1509_18670} {RNA1310_7739.1} {RNA815_2588}
16. MligTC455_13006 55 1.15 Mlig455_044901

Neo: -

Age: -

 PCDH11Y 0.965 - - - - 0.965 - Mlig455_044901 {REF} {Length: 6092} {Pfam: Cadherin domain [PF00028.19, score=276.7]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=79.8]; Cadherin-like [PF08266.14, score=44.2]; Cadherin-like [PF16184.7, score=39.5]; Cadherin prodomain like [PF08758.13, score=30.3]} {Human: ENSG00000099715, PCDH11Y, protocadherin 11 Y-linked, [Score=292, Expect=5e-80]; ENSG00000102290, PCDH11X, protocadherin 11 X-linked, [Score=291, Expect=5e-80]} {Mouse: ENSMUSG00000034755, Pcdh11x, protocadherin 11 X-linked, [Score=281, Expect=9e-78]} {Dmel: FBgn0001075, ft, fat, [Score=239, Expect=3e-63]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=206, Expect=3e-53]} {Smed: dd_Smed_v6_18373_0_1, dd_Smed_v6_18373_0_1, [Score=290, Expect=1e-80]} {RNA1509_54067} {RNA1310_21501} {RNA815_32416}
17. MligTC455_35004 42 0.87 Mlig455_070373

Neo: -

Age: Up-Down-Up

 SVEP1 0.965 - - - - 0.965 - Mlig455_070373 {REF} {Length: 2896} {Pfam: EGF-like domain [PF00008.29, score=30.9]; EGF-like domain [PF07974.15, score=25.8]} {Human: ENSG00000165124, SVEP1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=52.4, Expect=1e-06]; ENSG00000148400, NOTCH1, notch 1, [Score=51.2, Expect=3e-06]} {Mouse: ENSMUSG00000047793, Sned1, sushi, nidogen and EGF-like domains 1, [Score=55.8, Expect=6e-08]} {RNA1509_48097} {RNA1310_29794} {RNA815_16285}
18. MligTC455_41910 46 0.96 Mlig455_031932, Mlig455_032665, Mlig455_070395

Neo: -

Age: -

 0.965 - - - - 0.965 -

Mlig455_031932 {REF} {Length: 811} {Pfam: PAN-like domain [PF08277.14, score=21.2]; Carbohydrate binding domain (family 19) [PF03427.15, score=18.8]} {RNA1310_52317.2} {RNA815_34259}

Mlig455_032665 {REF} {Length: 903} {Pfam: Carbohydrate binding domain (family 19) [PF03427.15, score=21.5]} {RNA1310_52317.1} {RNA815_34259}

Mlig455_070395 {REF} {Length: 636} {Pfam: Carbohydrate binding domain (family 19) [PF03427.15, score=21.5]} {RNA1310_52317.1} {RNA815_34259}
19. MligTC455_46229 215 4.48 Mlig455_022523, Mlig455_022563

Neo: -

Age: -

Region-enriched R2: 5.024/0.00529

 0.965 - - - - 0.965 -

Mlig455_022523 {REF} {Length: 2044} {RNA1310_42787} {RNA815_17352}

Mlig455_022563 {REF} {Length: 1991} {RNA1310_42787} {RNA815_17352}
20. MligTC455_49829 606 12.63 Mlig455_018528

Neo: -

Age: -

Region-enriched R8: 5.323/0.00000

 0.965 - - - - 0.965 - Mlig455_018528 {REF} {Length: 3314} {Pfam: Plectin repeat [PF00681.22, score=39.5]; SH3 domain [PF17902.3, score=22.5]} {Dmel: FBgn0013733, shot, short stop, [Score=57.0, Expect=9e-08]} {Celegans: WBGene00006952, wrt-6, Warthog protein 6 Warthog protein 6 N-product Warthog protein 6 C-product, [Score=51.2, Expect=3e-06]} {RNA1509_40966} {RNA1310_5072.1} {RNA815_12828}
21. MligTC455_11636 7 0.15 Mlig455_067475

Neo: -

Age: -

 0.963 - - - - 0.963 - Mlig455_067475 {REF} {Length: 565} {NoTransDecoderORF} {RNA1509_26331} {RNA1310_7323} {RNA815_2947}
22. MligTC455_53072 27 0.57 Mlig455_059541

Neo: -

Age: -

 CASK 0.961 - - - - 0.961 - Mlig455_059541 {REF} {Length: 5770} {Pfam: Guanylate kinase [PF00625.23, score=201.8]; Protein kinase domain [PF00069.27, score=148.2]; L27 domain [PF02828.18, score=62.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=62.1]; PDZ domain [PF00595.26, score=57.5]; PDZ domain [PF17820.3, score=24.4]; Variant SH3 domain [PF07653.19, score=23.4]; SH3 domain [PF00018.30, score=21.9]} {Human: ENSG00000147044, CASK, calcium/calmodulin dependent serine protein kinase, [Score=1063, Expect=0.0]} {Mouse: ENSMUSG00000031012, Cask, calcium/calmodulin-dependent serine protein kinase (MAGUK family), [Score=1063, Expect=0.0]} {Dmel: FBgn0013759, CASK, [Score=890, Expect=0.0]} {Celegans: WBGene00002991, lin-2, [Score=738, Expect=0.0]} {Smed: dd_Smed_v6_7723_0_4, dd_Smed_v6_7723_0_4, [RH, Score=1149, Expect=0.0]} {RNA1509_13322} {RNA1310_1798.2} {RNA815_14711}
23. MligTC455_50704 36 0.74 Mlig455_007321, Mlig455_068329

Neo: -

Age: -

 0.96 - - - - 0.960 -

Mlig455_007321 {REF} {Length: 1784} {RNA815_63232}

Mlig455_068329 {REF} {Length: 1748} {RNA815_63232}
24. MligTC455_32230 14 0.3 Mlig455_057830

Neo: -

Age: -

 0.959 - - - - 0.959 - Mlig455_057830 {REF} {Length: 735} {NoTransDecoderORF} {RNA1509_10105} {RNA1310_12936.2} {RNA815_17574.3}
25. MligTC455_32521 203 4.23 Mlig455_040932

Neo: -

Age: Down-Down-Up

Region-enriched R8: 3.877/0.00012
Region-enriched R2: 3.007/0.00212

 0.958 - - - - 0.958 - Mlig455_040932 {REF} {Length: 1862} {RNA1310_21335.1} {RNA815_57481}
26. MligTC455_15684 119 2.47 Mlig455_011251

Neo: -

Age: Up-Down-Up

 SNED1 0.957 - - - - 0.957 - Mlig455_011251 {REF} {Length: 1934} {Pfam: EGF-like domain [PF00008.29, score=24.9]} {Human: ENSG00000162804, SNED1, sushi, nidogen and EGF like domains 1, [Score=54.7, Expect=3e-08]; ENSG00000148400, NOTCH1, notch 1, [Score=53.5, Expect=9e-08]; ENSG00000165124, SVEP1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=52.4, Expect=2e-07]} {Mouse: ENSMUSG00000047793, Sned1, sushi, nidogen and EGF-like domains 1, [Score=55.1, Expect=1e-08]; ENSMUSG00000038146, Notch3, notch 3, [Score=52.8, Expect=9e-08]} {RNA1509_48141} {RNA1310_40191} {RNA815_46710}
27. MligTC455_18843 15 0.3 Mlig455_068761

Neo: -

Age: -

 0.957 - - - - 0.957 - Mlig455_068761 {REF} {Length: 734} {NoTransDecoderORF} {RNA1310_115139}
28. MligTC455_36838 55 1.15 Mlig455_023457

Neo: -

Age: -

 SSTR4 0.957 - - - - 0.957 - Mlig455_023457 {REF} {Length: 5737} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=97.3]; 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=60.7]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=20.5]} {Human: ENSG00000132671, SSTR4, somatostatin receptor 4, [Score=48.5, Expect=1e-05]} {Mouse: ENSMUSG00000031489, Adrb3, adrenergic receptor, beta 3, [Score=53.1, Expect=3e-07]; ENSMUSG00000037014, Sstr4, somatostatin receptor 4, [Score=52.0, Expect=9e-07]} {Dmel: FBgn0029768, SPR, Sex peptide receptor, [RH, Score=154, Expect=9e-42]} {Celegans: WBGene00009629, sprr-2, Sex Peptide Receptor (Drosophila) Related, [RH, Score=144, Expect=3e-38]} {Smed: dd_Smed_v6_14444_0_1, dd_Smed_v6_14444_0_1, [RH, Score=192, Expect=3e-56]} {RNA1310_22470} {RNA815_32139}
29. MligTC455_11163 8 0.17 Mlig455_028249

Neo: -

Age: -

 0.956 - - - - 0.956 - Mlig455_028249 {REF} {Length: 245} {NoTransDecoderORF} {RNA1509_6782} {RNA1310_12404} {RNA815_4642}
30. MligTC455_15240 11 0.23 Mlig455_051415

Neo: -

Age: -

 0.955 - - - - 0.955 - Mlig455_051415 {REF} {Length: 607} {NoTransDecoderORF}
31. MligTC455_10860 42 0.88 Mlig455_020252

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_020252 {REF} {Length: 1943} {NoTransDecoderORF} {RNA1509_37983, RNA1509_43892} {RNA1310_71680.1, RNA1509_37983} {RNA1509_37983, RNA815_48522}
32. MligTC455_40716 197 4.1 Mlig455_067129

Neo: -

Age: Down-Down-Up

 PDE1C 0.953 - - - - 0.953 - Mlig455_067129 {REF} {Length: 2647} {Pfam: 3'5'-cyclic nucleotide phosphodiesterase [PF00233.21, score=260.8]; 3'5'-cyclic nucleotide phosphodiesterase N-terminal [PF08499.14, score=36.8]} {Human: ENSG00000154678, PDE1C, phosphodiesterase 1C, [Score=375, Expect=3e-121]} {Mouse: ENSMUSG00000004347, Pde1c, phosphodiesterase 1C, [Score=383, Expect=1e-124]} {Dmel: FBgn0264815, Pde1c, Phosphodiesterase 1c, [Score=338, Expect=1e-107]} {Celegans: WBGene00011433, pde-1, Probable 3',5'-cyclic phosphodiesterase pde-1, [Score=342, Expect=2e-110]} {Smed: dd_Smed_v6_26758_0_1, dd_Smed_v6_26758_0_1, [Score=419, Expect=1e-140]} {RNA1509_46211} {RNA1310_29930, RNA1509_46211} {RNA1509_46211, RNA815_22606}
33. MligTC455_17809 89 1.85 Mlig455_066801, Mlig455_066865

Neo: -

Age: -

 0.951 - - - - 0.951 -

Mlig455_066801 {REF} {Length: 1886} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=41.4]} {Smed: dd_Smed_v6_54490_0_1, dd_Smed_v6_54490_0_1, [Score=46.2, Expect=3e-06]} {RNA1310_22785} {RNA815_13697}

Mlig455_066865 {REF} {Length: 1886} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=41.2]} {Smed: dd_Smed_v6_54490_0_1, dd_Smed_v6_54490_0_1, [Score=46.6, Expect=3e-06]} {RNA1310_22785} {RNA815_13697}
34. MligTC455_36762 10 0.21 Mlig455_057461

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_057461 {REF} {Length: 1806} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=24.8]} {Smed: dd_Smed_v6_38501_0_1, dd_Smed_v6_38501_0_1, [Score=155, Expect=6e-43]}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA