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Results for MligTC455_32230

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_32230 14 0.30 Mlig455_057830

Neo: -

Age: -

 Mlig455_057830 {REF} {Length: 735} {NoTransDecoderORF} {RNA1509_10105} {RNA1310_12936.2} {RNA815_17574.3}

Cumulative graph for MligTC455_32230

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 1.73 0.715 0.99965 1.00000
RegionR2 -2.731 0.715 0.99977 1.00000
RegionR3 -0.468 0.715 0.99970 1.00000
RegionR4 2.007 0.715 0.99983 1.00000
RegionR5 0.234 0.715 0.99991 1.00000
RegionR6 -1.177 0.715 0.99984 1.00000
RegionR7 -0.468 0.715 0.99998 1.00000
RegionR8 0.874 0.715 0.99994 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -2.75 0.715 0.99993 1.00000
RegenerationR2 3.535 0.715 0.57487 0.90444
RegenerationR3 0.22 0.715 0.56975 0.89381
RegenerationR4 -1.306 0.715 0.97154 1.00000
RegenerationR5 0.263 0.715 0.85805 1.00000
RegenerationR6 1.697 0.715 0.72122 0.93618
RegenerationBL 2.473 0.715 0.96237 1.00000
RegenerationTP -1.668 0.715 0.99990 1.00000


Genes with expression patterns similar to MligTC455_32230

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_32230 14 0.3 Mlig455_057830

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_057830 {REF} {Length: 735} {NoTransDecoderORF} {RNA1509_10105} {RNA1310_12936.2} {RNA815_17574.3}
2. MligTC455_50008 25 0.51 Mlig455_062569

Neo: -

Age: -

 0.972 - - - - 0.972 - Mlig455_062569 {REF} {Length: 2622} {Pfam: Ammonium Transporter Family [PF00909.23, score=334.6]} {Dmel: FBgn0038309, Amt, Ammonium transporter, [Score=154, Expect=1e-40]} {Celegans: WBGene00000133, amt-1, Putative ammonium transporter 1, [Score=362, Expect=1e-119]} {RNA1310_68464} {RNA815_58867}
3. MligTC455_11706 49 1.02 Mlig455_060087

Neo: -

Age: -

 0.971 - - - - 0.971 - Mlig455_060087 {REF} {Length: 497} {NoTransDecoderORF} {RNA1509_39225} {RNA1310_33523} {RNA815_31934}
4. MligTC455_15684 119 2.47 Mlig455_011251

Neo: -

Age: Up-Down-Up

 SNED1 0.969 - - - - 0.969 - Mlig455_011251 {REF} {Length: 1934} {Pfam: EGF-like domain [PF00008.29, score=24.9]} {Human: ENSG00000162804, SNED1, sushi, nidogen and EGF like domains 1, [Score=54.7, Expect=3e-08]; ENSG00000148400, NOTCH1, notch 1, [Score=53.5, Expect=9e-08]; ENSG00000165124, SVEP1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=52.4, Expect=2e-07]} {Mouse: ENSMUSG00000047793, Sned1, sushi, nidogen and EGF-like domains 1, [Score=55.1, Expect=1e-08]; ENSMUSG00000038146, Notch3, notch 3, [Score=52.8, Expect=9e-08]} {RNA1509_48141} {RNA1310_40191} {RNA815_46710}
5. MligTC455_32173 219 4.57 Mlig455_031549

Neo: -

Age: -

Region-enriched R5: 2.002/0.00002

 0.968 - - - - 0.968 - Mlig455_031549 {REF} {Length: 976} {Pfam: Cupin domain [PF07883.13, score=42.6]; AraC-like ligand binding domain [PF02311.21, score=20.4]} {RNA1509_21844} {RNA1310_48404} {RNA815_27700}
6. MligTC455_47764 44 0.92 Mlig455_044544

Neo: -

Age: -

 0.968 - - - - 0.968 - Mlig455_044544 {REF} {Length: 4460} {RNA1509_51612} {RNA1310_8696} {RNA815_20831}
7. MligTC455_30453 53 1.09 Mlig455_003193, Mlig455_021606

Neo: -

Age: -

 0.962 - - - - 0.962 -

Mlig455_003193 {REF} {Length: 824} {NoTransDecoderORF} {RNA1310_55844}

Mlig455_021606 {REF} {Length: 2417} {Pfam: F5/8 type C domain [PF00754.27, score=30.6]} {Smed: dd_Smed_v6_83746_0_1, dd_Smed_v6_83746_0_1, [Score=60.8, Expect=6e-12]} {RNA1310_52762} {RNA815_32413}
8. MligTC455_36825 281 5.86 Mlig455_011822, Mlig455_013197

Neo: -

Age: -

 0.962 - - - - 0.962 -

Mlig455_011822 {REF} {Length: 1429} {Mouse: ENSMUSG00000024246, Thumpd2, THUMP domain containing 2, [Score=54.3, Expect=9e-08]} {Celegans: WBGene00018026, F35A5.4, [Score=48.5, Expect=4e-06]} {Smed: dd_Smed_v6_11374_0_1, dd_Smed_v6_11374_0_1, [Score=92.4, Expect=1e-20]} {RNA1509_56033} {RNA1310_6823.1} {RNA815_9589}

Mlig455_013197 {REF} {Length: 2869} {Dmel: FBgn0261649, tinc, tincar, [Score=94.7, Expect=2e-19]} {Celegans: WBGene00044698, K09F5.6, [RH, Score=117, Expect=4e-27]} {Smed: dd_Smed_v6_11374_0_1, dd_Smed_v6_11374_0_1, [RH, Score=211, Expect=5e-58]} {RNA1509_36485, RNA1509_42227, RNA1509_56033} {RNA1310_6823.1, RNA1509_36485, RNA1509_42227, RNA1509_56033} {RNA1509_36485, RNA1509_42227, RNA1509_56033, RNA815_9589}
9. MligTC455_52945 209 4.36 Mlig455_049748, Mlig455_052857

Neo: -

Age: -

 0.961 - - - - 0.961 -

Mlig455_049748 {REF} {Length: 1155} {TRANSSPLICED} {Pfam: RecQ-mediated genome instability protein 2 [PF16100.7, score=60.4]} {RNA1310_51640} {RNA815_38291}

Mlig455_052857 {REF} {Length: 1937} {TRANSSPLICED} {Pfam: RecQ-mediated genome instability protein 2 [PF16100.7, score=60.6]} {RNA1310_51640} {RNA815_38291}
10. MligTC455_29921 18 0.37 Mlig455_062698

Neo: -

Age: -

 0.96 - - - - 0.960 - Mlig455_062698 {REF} {Length: 3416} {RNA1509_12781} {RNA1310_63.1} {RNA815_23.1}
11. MligTC455_00202 10 0.2 Mlig455_058953

Neo: -

Age: -

 0.959 - - - - 0.959 - Mlig455_058953 {REF} {Length: 578} {NoTransDecoderORF} {RNA1509_54430} {RNA1310_59969} {RNA815_64986}
12. MligTC455_08352 14 0.29 Mlig455_017214

Neo: Irradiation

Age: Down-Down-Up

 APEX1 0.957 - - - - 0.957 - Mlig455_017214 {REF} {Length: 1458} {TRANSSPLICED} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=69.4]; Endonuclease-reverse transcriptase [PF14529.8, score=24.9]} {Human: ENSG00000100823, APEX1, apurinic/apyrimidinic endodeoxyribonuclease 1, [RH, Score=305, Expect=2e-100]} {Mouse: ENSMUSG00000035960, Apex1, apurinic/apyrimidinic endonuclease 1, [RH, Score=310, Expect=1e-102]} {Dmel: FBgn0004584, Rrp1, Recombination repair protein 1, [RH, Score=302, Expect=3e-95]} {Celegans: WBGene00001372, exo-3, DNA-(apurinic or apyrimidinic site) lyase, [RH, Score=238, Expect=3e-75]} {Smed: dd_Smed_v6_11417_0_1, dd_Smed_v6_11417_0_1, [RH, Score=338, Expect=8e-114]} {RNA1509_16413} {RNA1310_25554} {RNA815_11218.1}
13. MligTC455_36914 217 4.52 Mlig455_005095

Neo: -

Age: -

 CASKIN2 0.953 - - - - 0.953 - Mlig455_005095 {REF} {Length: 5874} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=132.8]; Ankyrin repeats (3 copies) [PF12796.9, score=126.8]; Ankyrin repeats (many copies) [PF13857.8, score=117.7]; Ankyrin repeat [PF13606.8, score=104.6]; Ankyrin repeat [PF00023.32, score=94.1]; SAM domain (Sterile alpha motif) [PF00536.32, score=63.6]; SAM domain (Sterile alpha motif) [PF07647.19, score=52.1]} {Human: ENSG00000177303, CASKIN2, CASK interacting protein 2, [Score=317, Expect=1e-90]} {Mouse: ENSMUSG00000033597, Caskin1, CASK interacting protein 1, [RH, Score=348, Expect=6e-101]} {Dmel: FBgn0039249, CG11168, [RH, Score=146, Expect=1e-35]} {Celegans: WBGene00016725, C46H3.2, [RH, Score=154, Expect=4e-38]} {Smed: dd_Smed_v6_4717_0_1, dd_Smed_v6_4717_0_1, [RH, Score=107, Expect=1e-23]} {RNA1509_40726, RNA1509_42534} {RNA1310_8442.1, RNA1509_40726, RNA1509_42534} {RNA1509_40726, RNA1509_42534, RNA815_13696}
14. MligTC455_40248 33 0.68 Mlig455_056510

Neo: -

Age: Down-Up-Up

 0.953 - - - - 0.953 - Mlig455_056510 {REF} {Length: 1620} {RNA1310_66570} {RNA815_47280}
15. MligTC455_33725 46 0.96 Mlig455_059862

Neo: -

Age: -

 0.952 - - - - 0.952 - Mlig455_059862 {REF} {Length: 2526} {tRNA: Asp(GTC), score=67.3} {RNA1310_22634} {RNA815_27671}
16. MligTC455_38875 37 0.78 Mlig455_029375, Mlig455_029415

Neo: -

Age: logFC(26M/2M)=-0.939

 GRIK2 0.95 - - - - 0.950 -

Mlig455_029375 {REF} {Length: 3713} {Pfam: Ligand-gated ion channel [PF00060.28, score=88.9]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=58.3]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=34.5]; Receptor family ligand binding region [PF01094.30, score=20.4]} {Human: ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=136, Expect=2e-32]} {Mouse: ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=137, Expect=9e-33]} {Dmel: FBgn0038837, CG3822, [Score=150, Expect=4e-37]} {Celegans: WBGene00001613, glr-2, Glutamate receptor 2, [Score=126, Expect=1e-29]} {Smed: dd_Smed_v6_21015_0_1, dd_Smed_v6_21015_0_1, [Score=242, Expect=3e-72]} {RNA1310_67049} {RNA815_49856}

Mlig455_029415 {REF} {Length: 2520} {Pfam: Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=25.5]} {Smed: dd_Smed_v6_31078_0_1, dd_Smed_v6_31078_0_1, [Score=73.9, Expect=5e-14]} {RNA1310_74947} {RNA815_49856}

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