TomoSeq data search

Data search

Results for MligTC455_01383

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_01383

207

4.32

Mlig455_006582

Neo: -

Age: -

EDRF1

Mlig455_006582 {REF} {Length: 4325} {TRANSSPLICED} {Human: ENSG00000107938, EDRF1, erythroid differentiation regulatory factor 1, [RH, Score=203, Expect=1e-52]} {Mouse: ENSMUSG00000039990, Edrf1, erythroid differentiation regulatory factor 1, [RH, Score=211, Expect=3e-55]} {Dmel: FBgn0035923, CG6511, [Score=228, Expect=8e-61]} {Smed: dd_Smed_v6_6203_0_1, dd_Smed_v6_6203_0_1, [RH, Score=185, Expect=1e-47]} {RNA1509_12637} {RNA1310_1900.1, RNA1509_12637} {RNA1509_12637, RNA815_1389.1}

Cumulative graph for MligTC455_01383

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-5.011	2.858	0.28693	0.93886
RegionR2	0.77	2.858	0.45624	0.84398
RegionR3	0.25	2.858	0.74849	1.00000
RegionR4	1.474	2.858	0.10613	0.32027
RegionR5	1.64	2.858	0.01882	0.09276
RegionR6	0.88	2.858	0.34508	0.93143
RegionR7	0.196	2.858	0.79192	1.00000
RegionR8	-0.199	2.858	0.91587	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.922	2.858	0.99988	1.00000
RegenerationR2	-0.335	2.858	0.50388	0.87291
RegenerationR3	0.442	2.858	0.46133	0.83839
RegenerationR4	-0.592	2.858	0.32036	0.75868
RegenerationR5	0.04	2.858	0.93997	1.00000
RegenerationR6	-0.335	2.858	0.57129	0.85241
RegenerationBL	-0.496	2.858	0.61405	0.95847
RegenerationTP	-0.343	2.858	0.77079	1.00000

Genes with expression patterns similar to MligTC455_01383

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_01383	207	4.32	Mlig455_006582	Neo: - Age: -	EDRF1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_006582 {REF} {Length: 4325} {TRANSSPLICED} {Human: ENSG00000107938, EDRF1, erythroid differentiation regulatory factor 1, [RH, Score=203, Expect=1e-52]} {Mouse: ENSMUSG00000039990, Edrf1, erythroid differentiation regulatory factor 1, [RH, Score=211, Expect=3e-55]} {Dmel: FBgn0035923, CG6511, [Score=228, Expect=8e-61]} {Smed: dd_Smed_v6_6203_0_1, dd_Smed_v6_6203_0_1, [RH, Score=185, Expect=1e-47]} {RNA1509_12637} {RNA1310_1900.1, RNA1509_12637} {RNA1509_12637, RNA815_1389.1}
2.	MligTC455_52116	1099	22.9	Mlig455_056371	Neo: - Age: Down-Up-Up Region-enriched R5: 1.213/0.01277	SDE2	2.489	-	-	0.721	-	0.959	0.809	Mlig455_056371 {REF} {Length: 1424} {TRANSSPLICED} {Pfam: Silencing defective 2 N-terminal ubiquitin domain [PF13019.8, score=79.6]; Replication stress response SDE2 C-terminal [PF13297.8, score=71.6]; Cornifin (SPRR) family [PF02389.17, score=24.0]} {Human: ENSG00000143751, SDE2, SDE2 telomere maintenance homolog, [RH, Score=124, Expect=5e-31]} {Mouse: ENSMUSG00000038806, Sde2, SDE2 telomere maintenance homolog (S. pombe), [RH, Score=158, Expect=1e-43]} {Dmel: FBgn0043455, CG5986, [RH, Score=84.7, Expect=1e-18]} {Celegans: WBGene00009996, F53F4.14, [RH, Score=79.7, Expect=5e-16]} {Smed: dd_Smed_v6_5448_0_1, dd_Smed_v6_5448_0_1, [RH, Score=155, Expect=5e-44]} {RNA1509_10307, RNA1509_43561, RNA1509_48494} {RNA1310_25308.1, RNA1509_10307, RNA1509_43561, RNA1509_48494} {RNA1509_10307, RNA1509_43561, RNA1509_48494, RNA815_15881}
3.	MligTC455_22806	482	10.04	Mlig455_001302	Neo: Irradiation Age: Up-Down-Down Region-enriched R4: 1.381/0.02439 Region-enriched R5: 1.137/0.01321	TBPL1	1.706	-	-	-	0.953	-	0.753	Mlig455_001302 {REF} {Length: 2719} {TRANSSPLICED} {Pfam: Transcription factor TFIID (or TATA-binding protein, TBP) [PF00352.23, score=114.7]} {Human: ENSG00000028839, TBPL1, TATA-box binding protein like 1, [RH, Score=166, Expect=2e-49]} {Mouse: ENSMUSG00000071359, Tbpl1, TATA box binding protein-like 1, [RH, Score=166, Expect=1e-49]} {Dmel: FBgn0261793, Trf2, TATA box binding protein-related factor 2, [Score=161, Expect=9e-44]} {Celegans: WBGene00006542, tbp-1, TATA-box-binding protein, [Score=130, Expect=1e-34]} {Smed: dd_Smed_v6_17006_0_1, dd_Smed_v6_17006_0_1, [Score=106, Expect=2e-26]} {RNA1509_4579} {RNA1310_3410, RNA1509_4579} {RNA1509_4579, RNA815_18482}
4.	MligTC455_54339	239	4.97	Mlig455_015428, Mlig455_032150	Neo: - Age: - Region-enriched R4: 3.050/0.00042	KHK	1.673	-	-	-	-	0.964	0.709	Mlig455_015428 {REF} {Length: 1854} {TRANSSPLICED} {Pfam: pfkB family carbohydrate kinase [PF00294.26, score=96.6]} {Human: ENSG00000138030, KHK, ketohexokinase, [RH, Score=177, Expect=5e-53]} {Mouse: ENSMUSG00000029162, Khk, ketohexokinase, [RH, Score=177, Expect=3e-53]} {Dmel: FBgn0036942, CG7328, [RH, Score=136, Expect=2e-37]} {RNA1509_18268} {RNA1310_38358} {RNA815_33545} Mlig455_032150 {REF} {Length: 1982} {TRANSSPLICED} {Pfam: pfkB family carbohydrate kinase [PF00294.26, score=93.9]} {Human: ENSG00000138030, KHK, ketohexokinase, [RH, Score=179, Expect=8e-54]} {Mouse: ENSMUSG00000029162, Khk, ketohexokinase, [RH, Score=180, Expect=3e-54]} {Dmel: FBgn0036942, CG7328, [RH, Score=134, Expect=9e-37]} {RNA1509_18268} {RNA1310_38358} {RNA815_33545}
5.	MligTC455_22487	283	5.89	Mlig455_001081	Neo: - Age: -		0.961	-	-	-	0.961	-	-	Mlig455_001081 {REF} {Length: 3990} {TRANSSPLICED} {Smed: dd_Smed_v6_11081_0_2, dd_Smed_v6_11081_0_2, [Score=62.0, Expect=1e-09]} {RNA1509_12629} {RNA1310_2194.1} {RNA815_7569}
6.	MligTC455_49431	1241	25.84	Mlig455_051496, Mlig455_051534	Neo: - Age: logFC(26M/2M)=0.325	IDE	0.961	-	-	-	-	0.961	-	Mlig455_051496 {REF} {Length: 3313} {TRANSSPLICED} {Pfam: Middle or third domain of peptidase_M16 [PF16187.7, score=219.3]; Insulinase (Peptidase family M16) [PF00675.22, score=124.5]; Peptidase M16 inactive domain [PF05193.23, score=73.3]} {Human: ENSG00000119912, IDE, insulin degrading enzyme, [Score=639, Expect=0.0]} {Mouse: ENSMUSG00000111624, Ide, insulin degrading enzyme, [Score=636, Expect=0.0]; ENSMUSG00000056999, Ide, insulin degrading enzyme, [Score=636, Expect=0.0]} {Dmel: FBgn0001247, Ide, Insulin degrading metalloproteinase, [Score=624, Expect=0.0]} {Celegans: WBGene00018426, F44E7.4, [Score=504, Expect=1e-161]} {Smed: dd_Smed_v6_9500_1_1, dd_Smed_v6_9500_1_1, [Score=545, Expect=7e-178]} {RNA1509_42817} {RNA1310_5752} {RNA815_4207} Mlig455_051534 {REF} {Length: 3350} {TRANSSPLICED} {Pfam: Middle or third domain of peptidase_M16 [PF16187.7, score=218.1]; Insulinase (Peptidase family M16) [PF00675.22, score=124.5]; Peptidase M16 inactive domain [PF05193.23, score=74.0]} {Human: ENSG00000119912, IDE, insulin degrading enzyme, [Score=648, Expect=0.0]} {Mouse: ENSMUSG00000056999, Ide, insulin degrading enzyme, [Score=643, Expect=0.0]; ENSMUSG00000111624, Ide, insulin degrading enzyme, [Score=643, Expect=0.0]} {Dmel: FBgn0001247, Ide, Insulin degrading metalloproteinase, [Score=627, Expect=0.0]} {Celegans: WBGene00018426, F44E7.4, [Score=517, Expect=1e-166]} {Smed: dd_Smed_v6_9500_1_1, dd_Smed_v6_9500_1_1, [Score=555, Expect=0.0]} {RNA1509_42817, RNA1509_52505} {RNA1310_5752, RNA1509_52505} {RNA1509_52505, RNA815_4207}
7.	MligTC455_22122	250	5.21	Mlig455_001815	Neo: - Age: Down-Up-Up Region-enriched R5: 2.004/0.02282	SNX8	0.957	-	-	-	-	0.957	-	Mlig455_001815 {REF} {Length: 3041} {TRANSSPLICED} {Pfam: PX domain [PF00787.26, score=54.8]} {Human: ENSG00000106266, SNX8, sorting nexin 8, [RH, Score=192, Expect=2e-54]} {Mouse: ENSMUSG00000029560, Snx8, sorting nexin 8, [RH, Score=195, Expect=8e-56]} {Smed: dd_Smed_v6_7087_0_1, dd_Smed_v6_7087_0_1, [Score=58.5, Expect=6e-09]} {RNA1509_13978, RNA1509_26615} {RNA1310_8229, RNA1509_26615} {RNA1509_26615, RNA815_15810}
8.	MligTC455_54133	328	6.82	Mlig455_060604, Mlig455_060645	Neo: - Age: -		0.952	-	-	-	-	-	0.952	Mlig455_060604 {REF} {Length: 2468} {TRANSSPLICED} {RNA1509_48560} {RNA1310_22115.1} {RNA815_14461.1} Mlig455_060645 {REF} {Length: 3874} {TRANSSPLICED} {RNA1509_48560} {RNA1310_22115.1} {RNA815_14461.1}
9.	MligTC455_42038	201	4.18	Mlig455_038183	Neo: - Age: -		0.951	-	-	-	-	-	0.951	Mlig455_038183 {REF} {Length: 3247} {Pfam: HECT-domain (ubiquitin-transferase) [PF00632.27, score=45.6]} {RNA1509_43610, RNA1509_55414} {RNA1310_6755.1, RNA1509_43610, RNA1509_55414} {RNA1509_43610, RNA1509_55414, RNA815_34129}

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